For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KVHHLNCGTMNSPGAALLCHVLLVEAGNGLVLVDTGFGVQDCLDPRRLGAFRHFLRPALLQNETAVHQIE RLGYRPSDVRHVVLTHFDFDHIGGLADFPDAQVHVTSAEARGAIHAPSFRERVRYRSVQWAHGPKLVEHG HDGESWRGFAAAKPLDAIADGVVLVPMPGHTRGHAAVAVDAGDRWILHCGDAFYHVGTLDGQSKVPFVLR SQEELFSFDRRQLRDNQARLAELQRRQDPGLLIICAHDPSLYALAKDLS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3523 | - | - | 100% (260) | hypothetical protein MMAR_3523 |
M. marinum M | MMAR_0708 | - | 1e-05 | 29.71% (138) | beta lactamase-like protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2322c | - | 1e-123 | 78.29% (258) | hypothetical protein Mb2322c |
M. gilvum PYR-GCK | Mflv_1675 | - | 2e-84 | 57.25% (262) | beta-lactamase domain-containing protein |
M. tuberculosis H37Rv | Rv2300c | - | 1e-123 | 78.29% (258) | hypothetical protein Rv2300c |
M. leprae Br4923 | MLBr_00270 | - | 4e-06 | 28.57% (189) | hypothetical protein MLBr_00270 |
M. abscessus ATCC 19977 | MAB_4947 | - | 4e-09 | 25.51% (247) | Beta-lactamase-like protein |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_3427 | - | 3e-11 | 31.75% (189) | metal dependent hydrolase |
M. thermoresistible (build 8) | TH_0195 | - | 1e-11 | 28.80% (191) | metal dependent hydrolase |
M. ulcerans Agy99 | MUL_2742 | - | 1e-148 | 96.92% (260) | hypothetical protein MUL_2742 |
M. vanbaalenii PYR-1 | Mvan_5078 | - | 5e-92 | 61.78% (259) | beta-lactamase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3523|M.marinum_M -------------------------------------------------- MUL_2742|M.ulcerans_Agy99 -------------------------------------------------- Mb2322c|M.bovis_AF2122/97 MVATRGRPCPTNFSRPQRPRVAGNGTKSQRCRGRLTTSMLGVAPEAKGPP Rv2300c|M.tuberculosis_H37Rv MVATRGRPCPTNFSRPQRPRVAGNGTKSQRCRGRLTTSMLGVAPEAKGPP Mflv_1675|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_5078|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_3427|M.smegmatis_MC2_155 --------------------------MTTTDNTAHAGTQTIDELVPSRYA TH_0195|M.thermoresistible__bu --------------------------MSTTAVRPVA-HPEHDELVPSRYA MAB_4947|M.abscessus_ATCC_1997 ------------------------MFSAAVRTFTVGDATVTQLTELDVWP MLBr_00270|M.leprae_Br4923 -------------------------------------------------- MMAR_3523|M.marinum_M MKVHHLNCGTMNSP--GAALLCHVLLVEAGNGLVLVDTGFGVQDCLD-PR MUL_2742|M.ulcerans_Agy99 MKVHHHNCGTMNSP--GAALLCHVLLVEAGNGLVLVDTGFGVQDCLD-QR Mb2322c|M.bovis_AF2122/97 VKVHHLNCGTMNAF--GIALLCHVLLVETDDGLVLVDTGFGIQDCLD-PG Rv2300c|M.tuberculosis_H37Rv VKVHHLNCGTMNAF--GIALLCHVLLVETDDGLVLVDTGFGIQDCLD-PG Mflv_1675|M.gilvum_PYR-GCK MKVRHLNCGTIRPVKVPVPMVCHVLLVESDAGLVLVDSGFGTRDCAH-PE Mvan_5078|M.vanbaalenii_PYR-1 MKVHHLNCGTIRPTGVGT-MVCHVLLVESADGLVLVDTGFGTHDCED-PN MSMEG_3427|M.smegmatis_MC2_155 VQVGDIEVLVISDGVLPITASTMATNADSDTYRTWLSDRFLPQDILDWPL TH_0195|M.thermoresistible__bu LRVGDIEVLVISDGVLPLPAATLATNADRAELAAWLHDMFLPADLFDWPL MAB_4947|M.abscessus_ATCC_1997 IKPHHWYPALSEEQLVFARANYAPSAVSDDGSELIFAIHNYVIELADTII MLBr_00270|M.leprae_Br4923 -MAAATLFQVTDSVHFARGDAVNWALVADDTGVMLIDTGYPGD------- . . MMAR_3523|M.marinum_M RLGAFR------------HFLRPALLQNETAVHQIERLGYRPSDVRHVVL MUL_2742|M.ulcerans_Agy99 RLGAFR------------HFLRPALLQNETAVHQIERLGYRPSDVRHIVL Mb2322c|M.bovis_AF2122/97 RVGLFR------------HVLRPAFLQAETAARQIEQLGYRTSDVRHIVL Rv2300c|M.tuberculosis_H37Rv RVGLFR------------HVLRPAFLQAETAARQIEQLGYRTSDVRHIVL Mflv_1675|M.gilvum_PYR-GCK EFGRIRR-----------RIIRPDFERTETAAEQLAHLGYRLSDVRHIIV Mvan_5078|M.vanbaalenii_PYR-1 RFGRIRS-----------RFIRPNFDRGETALNQIRQLGFRRSDVRHVVV MSMEG_3427|M.smegmatis_MC2_155 NVVVVRSGDRTILVDAGLGVEFPDFPRAGRTVARLEAAGIDPSAVTDVVL TH_0195|M.thermoresistible__bu NVAVVRSGDRTILIDSGLGLEFPEFPRAGRLAHRMQAAGIEPAAVTDVVL MAB_4947|M.abscessus_ATCC_1997 VVDTCSGN------HKNRPLFADLHMLNTDYLTRLEQSGYSPEAVDIVVN MLBr_00270|M.leprae_Br4923 ---------------------------RDDVVASLRQLGYEAGDVRAILL : * * :: MMAR_3523|M.marinum_M THFDFDHIGGLADFPDAQVHVTSAEARGAIHAP--------SFRERVRYR MUL_2742|M.ulcerans_Agy99 THFDSDHIGGLADFPDAQVHVTSAEARGAIHAP--------SFRERVRYR Mb2322c|M.bovis_AF2122/97 THFDFDHIGGIADFPEAHLHVTAAEARGAIHAP--------SLRERLRYR Rv2300c|M.tuberculosis_H37Rv THFDFDHIGGIADFPEAHLHVTAAEARGAIHAP--------SLRERLRYR Mflv_1675|M.gilvum_PYR-GCK THFDADHIGGLADFPDAQVHVTAQEVLSAMKSP--------SVQNRIRFQ Mvan_5078|M.vanbaalenii_PYR-1 THFDADHIGGLADFPDALVHVTTTEAFGAMRSP--------SIQERIRFR MSMEG_3427|M.smegmatis_MC2_155 THLHMDHIGGLLSHGLKERLRPDLRIHVASAEA--------NFWESPDFS TH_0195|M.thermoresistible__bu THLHMDHVGGLLTDGLMGRLRPDLRVHLAAAEA--------EFWAAPDFS MAB_4947|M.abscessus_ATCC_1997 THLHLDHCG----WNTRLVEGTWRPTFPAATYL--------FHHTELKYI MLBr_00270|M.leprae_Br4923 THAHIDHMGSAIWFASKHRTPVYCHADEVGHTKREYLEQVSLLNIAMRVW ** . ** * . MMAR_3523|M.marinum_M SVQWAHGPKLVEHGHDG---ESWRG-FAAAKPLDAIADGVVLVPMP---- MUL_2742|M.ulcerans_Agy99 SVQWAHGPKLVEHGHDG---ESSPG-FAAAKTLDAIADGVVLVPMP---- Mb2322c|M.bovis_AF2122/97 RGQWAHGPKLVEHGPDG---EPWRG-FASAKPLDSIGTGVVLVPMP---- Rv2300c|M.tuberculosis_H37Rv RGQWAHGPKLVEHGPDG---EPWRG-FASAKPLDSIGTGVVLVPMP---- Mflv_1675|M.gilvum_PYR-GCK PSQWAHGPRIVEHTADG---EPWRG-FAAAKELSEIGPGFALVPLP---- Mvan_5078|M.vanbaalenii_PYR-1 PPQWAHGPRIVEHDIDG---EAWRG-FAAAKELTQIGPGFVLVSLP---- MSMEG_3427|M.smegmatis_MC2_155 HTEMPAPVPPALRAIAGRFLDEYRGQIQTFDSEYDITPGVHVARTG---- TH_0195|M.thermoresistible__bu RTAMPHPVPDVLRAVASRFLDVYRDRLRPFDTQYEVAPGVSVHRTG---- MAB_4947|M.abscessus_ATCC_1997 RAQWESAPIDQWQDNGGWVYEDSILPVLEHAPYGFVKSGQVLHSYGSTHI MLBr_00270|M.leprae_Br4923 QPRWAIWSGHVLRSGGLIRGGIPTAQPLTAETAAGLPGHPMAIFTP---- : : MMAR_3523|M.marinum_M ------GHTRGHAAVAVDAGDRWILHCGDAFYHVG-TLDG--QSKVPFVL MUL_2742|M.ulcerans_Agy99 ------GHTRGHAAVAVDAGDRWILHCGDAFYHVG-TLDG--QSKVPFVL Mb2322c|M.bovis_AF2122/97 ------GHTRGHAAVAVDAGHRWVLHCGDAFYHRG-TLDG--RFRVPFVM Rv2300c|M.tuberculosis_H37Rv ------GHTRGHAAVAVDAGHRWVLHCGDAFYHRG-TLDG--RFRVPFVM Mflv_1675|M.gilvum_PYR-GCK ------GHTEGHACVAVDAGHRWLLHAGDAFYHHS-EIDGGGPPPMPASL Mvan_5078|M.vanbaalenii_PYR-1 ------GHTRGHACVAVDAGHRWLLHAGDSFYHPG-TLAG--APPVPKWT MSMEG_3427|M.smegmatis_MC2_155 ------GHTPGHSVVRLASGEDRLTFAGDAVFAPG-FDNPQWHNGFEHDP TH_0195|M.thermoresistible__bu ------GHTPGHSIVRLESGKDRLTFAGDAVFQVG-FDNPQWHNGFEHDP MAB_4947|M.abscessus_ATCC_1997 RALDAGGHTPGHVAIEVRAADTGLLIAGDALHHPMQAQFPDLPFYADADP MLBr_00270|M.leprae_Br4923 ------GHTGGHCSYVVDG----VLISGDALITGHPLLRHRGPQLLTAVF *** ** : . : .**:. MMAR_3523|M.marinum_M RSQEELFSFDRRQLRDNQARLAELQRRQDPGLLIICAHDPSLYALAKDLS MUL_2742|M.ulcerans_Agy99 RSQEELFSFDRRQLRDNQARLAELQRRQDPGLLIICAHDPSLYAVAKDLS Mb2322c|M.bovis_AF2122/97 RAEEKLLSYNRNQLRDNQARIVELHRRHDPDLLIVCAHDPDLYQLARDTA Rv2300c|M.tuberculosis_H37Rv RAEEKLLSYNRNQLRDNQARIVELHRRHDPDLLIVCAHDPDLYQLARDTA Mflv_1675|M.gilvum_PYR-GCK RAFEMAVAADRKMVLDNHSRLTELYRRQDPDLLIVCSHDRKLYEHAKATA Mvan_5078|M.vanbaalenii_PYR-1 ARLEMLVASDKQKVKQNHVRLAELYRRQDPDLMILCSHDVTLYEQARATA MSMEG_3427|M.smegmatis_MC2_155 EESVRVRVELLRELAATGESLVATHLP-FPSVCHVAAAGDAFRCVPAVWD TH_0195|M.thermoresistible__bu EEAARVRVRLLQEIAASGETLVATHLP-FPSLCRVAPRGEAFRFVPTVWD MAB_4947|M.abscessus_ATCC_1997 AQAVATRRALLGRCADENLKLLTAHFPAHSPLGVRRSGAAFTWDGSRAID MLBr_00270|M.leprae_Br4923 SHSQKQCLRSLDALGLLETRILAPGHGELWHGPIREATEAALKQAGALTR : . MMAR_3523|M.marinum_M -- MUL_2742|M.ulcerans_Agy99 -- Mb2322c|M.bovis_AF2122/97 -- Rv2300c|M.tuberculosis_H37Rv -- Mflv_1675|M.gilvum_PYR-GCK GD Mvan_5078|M.vanbaalenii_PYR-1 QT MSMEG_3427|M.smegmatis_MC2_155 Y- TH_0195|M.thermoresistible__bu H- MAB_4947|M.abscessus_ATCC_1997 -- MLBr_00270|M.leprae_Br4923 --