For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_5244 (-)

annotation: cholesterol oxidase
coordinates: 5395404 - 5396225
length: 273

MSQSLTGKVALITGAARGQGRAHAARLAAEGADIIAVDLAGPLPPSVPYDSSTPEDLAATAELVRAAGRR
VVTAQTDVRDLDALTSSVDRAVGELGRLDVIVANAGICSPAPWNRITAQAFRDTIDTNVVGTWNTVMAGA
QHIIDGGRGGSIILIGSAAGINMQSFMVHYTASKHAVVGMARAFAAELGRYNIRVNSLNPGAVATPMGTG
RMRDALRAAADDYPHLRGLHKPLLPEGIAQPEDIADAVAWLASDQSRLVTASQVSVDLGVGYV
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_5244--100% (273)cholesterol oxidase
M. avium 104MAV_3098-e-12080.38% (265) carveol dehydrogenase ((+)-trans-carveol dehydrogenase)
M. avium 104MAV_1570-1e-9563.94% (269) carveol dehydrogenase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2771-1e-5647.45% (274) 3-ketoacyl-(acyl-carrier-protein) reductase
M. gilvum PYR-GCKMflv_4371-1e-9966.79% (265) short-chain dehydrogenase/reductase SDR
M. tuberculosis H37RvRv2750-1e-5647.45% (274) 3-ketoacyl-(acyl-carrier-protein) reductase
M. leprae Br4923MLBr_01807fabG18e-2229.12% (261) 3-oxoacyl-
M. abscessus ATCC 19977MAB_3844c-4e-5943.75% (272) putative short-chain dehydrogenase/reductase
M. marinum MMMAR_4754-1e-6148.90% (272) short-chain type dehydrogenase/reductase
M. smegmatis MC2 155MSMEG_2204-1e-10772.12% (269) carveol dehydrogenase ((+)-trans-carveol dehydrogenase)
M. thermoresistible (build 8)TH_3169-3e-9766.17% (269) PUTATIVE carveol dehydrogenase
M. ulcerans Agy99MUL_3392fabG2e-5345.93% (270) 3-ketoacyl-(acyl-carrier-protein) reductase
M. vanbaalenii PYR-1Mvan_1973-6e-9866.42% (265) short-chain dehydrogenase/reductase SDR

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_4371|M.gilvum_PYR-GCK          ------MRLEGRVAFITGAARGQGRAHAVRMAKEGADIIAVDIAGPLPPC
Mvan_1973|M.vanbaalenii_PYR-1       -----MSRLEGRVAFITGAARGQGRAHAVRMATEGADIIAVDIAGPLPPC
MSMEG_2204|M.smegmatis_MC2_155      ----MAERLTGRVAFITGAARGQGRAHAVRMAKEGADIIAVDIAGPLPPS
TH_3169|M.thermoresistible__bu      ----MTGRLAGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPDC
MAV_5244|M.avium_104                ----MSQSLTGKVALITGAARGQGRAHAARLAAEGADIIAVDLAGPLPPS
Mb2771|M.bovis_AF2122/97            ---MIDRPLEGKVAFITGAARGLGRAHAVRLAADGANIIAVDICEQIAS-
Rv2750|M.tuberculosis_H37Rv         ---MIDRPLEGKVAFITGAARGLGRAHAVRLAADGANIIAVDICEQIAS-
MUL_3392|M.ulcerans_Agy99           MSRPLDGPLSGRVAFITGAARGQGRAHALRLARDGADVIAVDLCDQIAS-
MMAR_4754|M.marinum_M               MTEQLGGRVAGKVAFITGAARGQGRSHAVRLAQEGADIIAVDVCKPIVEN
MAB_3844c|M.abscessus_ATCC_199      ---MADQPLAGKVAFVTGAARGQGRQHAVRLAQAGADVVAIDACAPVSEY
MLBr_01807|M.leprae_Br4923          ---------MTDAAAKVSAAPGRGK-----PAFVSRSILVTGGNRGIGLA
                                                .*  ..** * *:      *  . .::. .    :   

Mflv_4371|M.gilvum_PYR-GCK          VPYDHATADDLAETVELVKATGRRIIASAVDTRDGDALTAAVDSGVAELG
Mvan_1973|M.vanbaalenii_PYR-1       VPYDHATPDDLAETVKLVEATGRRILASKVDTRDGEALRATVEKGVAELG
MSMEG_2204|M.smegmatis_MC2_155      VPYDSATPEDLAETTRLVEATGRRILAARADTRDLEALRDVVGKGVAEFG
TH_3169|M.thermoresistible__bu      VPYEPATPEDLDETVRLVTATGRRIHAAVADTRDLDGLREAVDAGVAALG
MAV_5244|M.avium_104                VPYDSSTPEDLAATAELVRAAGRRVVTAQTDVRDLDALTSSVDRAVGELG
Mb2771|M.bovis_AF2122/97            VPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLSVALQAGLDEFG
Rv2750|M.tuberculosis_H37Rv         VPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLSVALQAGLDEFG
MUL_3392|M.ulcerans_Agy99           VPYPLGTAEELATTVKLVEDTGARIVASQADVRDREALAAALQAGIDELG
MMAR_4754|M.marinum_M               TTIPASTPEDLAETADLVKGHNRRIFTAEADVRDYDALKAAVDAGVDELG
MAB_3844c|M.abscessus_ATCC_199      AGYEAATPEDLKETVRLVEAAGRKIIAEQADVRNGAALQSVVEEAVAQFG
MLBr_01807|M.leprae_Br4923          VARRLVADGHRVAVTHRASVVPDWFFGVECDVTDNDAIGAAFKAVEEHQG
                                    .     :  .   ..  .      .     *. :  .:   .       *

Mflv_4371|M.gilvum_PYR-GCK          RLDIIVANAGVTAP-QAWDDISAEDFRDVIDVNVTGTWNTVMAGAHKIVD
Mvan_1973|M.vanbaalenii_PYR-1       RLDVIVANAGITAP-QAWDDIGADDFRDVMDVNVTGTWNTVMAGAHKIID
MSMEG_2204|M.smegmatis_MC2_155      RLDVIVANAGITVP-EPWNETTPESFRDVMDINVTGTWNTVMAGAQHIID
TH_3169|M.thermoresistible__bu      RLDVIVANAGICAP-QTWDAITPADFRDVMDINVTGTWNTVMAGARHIID
MAV_5244|M.avium_104                RLDVIVANAGICSP-APWNRITAQAFRDTIDTNVVGTWNTVMAGAQHIID
Mb2771|M.bovis_AF2122/97            RLDIVVANAGIA-----MMQAGDDGWRDVIDVNLTGVFHTVQVAIPTLIE
Rv2750|M.tuberculosis_H37Rv         RLDIVVANAGIA-----MMQAGDDGWRDVIDVNLTGVFHTVQVAIPTLIE
MUL_3392|M.ulcerans_Agy99           QVDIVVANAGIA-----PMQSGDDGWRDVIDVNLSGAYYTVEVAIPTMIE
MMAR_4754|M.marinum_M               RLDIIVANAGIGNGGATLDKTSEHDWQEMIDVNLSGVWKSVKAAVPHLIA
MAB_3844c|M.abscessus_ATCC_199      HIDILIANAGVLSW-GRLWEMSDQQWEDIIDTNLTGTWKTVKAVVPTMIE
MLBr_01807|M.leprae_Br4923          PVEVLVANAGITSD-MLIMRMSEEQFQKVIDVNLTGVFRVAKLASRNMIK
                                     :::::****:              :.. :* *: *.:  .      :: 

Mflv_4371|M.gilvum_PYR-GCK          GGRGGSIILISSAAGIK----LQPFMIHYTASKHAVTGMARAFAAELGKH
Mvan_1973|M.vanbaalenii_PYR-1       GGRGGSIILISSAAGIK----LQPFMIHYTASKHAVTGMARAFAAELGKH
MSMEG_2204|M.smegmatis_MC2_155      GGRGGSIILISSAAGIK----MQPFMVHYTASKHAVAGMARAFAAELGKH
TH_3169|M.thermoresistible__bu      GRRGGSIILISSLAGMK----LQPFMVHYTTSKHAVAGMARAFAAELGRH
MAV_5244|M.avium_104                GGRGGSIILIGSAAGIN----MQSFMVHYTASKHAVVGMARAFAAELGRY
Mb2771|M.bovis_AF2122/97            QGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVVGLMRAYANHLAPQ
Rv2750|M.tuberculosis_H37Rv         QGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVVGLMRAYANHLAPQ
MUL_3392|M.ulcerans_Agy99           QGRGGSIVLISSAAGLVGISSADAGAIGYVASKHALVGLMRVYANLLAPH
MMAR_4754|M.marinum_M               GGNGGSIVLTSSVGGMKAYPHCG----NYVAAKHGVVGLMRSFAVELGQH
MAB_3844c|M.abscessus_ATCC_199      AGNGGSIVIVSSVSGLKG----TPGNGAYVASKFGLTGLTKSLTIELAEY
MLBr_01807|M.leprae_Br4923          QRFG-RYIFMGSVVGLSG----VPGQANYAASKSGLIGMARSLARELGSR
                                       *   :: .*  *:            *.::* .: *: :  :  *.  

Mflv_4371|M.gilvum_PYR-GCK          SIRVNSVHPGPVVTDMGTGD-----MVTALGKAMETNPQLSNMMTPFLPT
Mvan_1973|M.vanbaalenii_PYR-1       SIRVNSVHPGPVLTDMGTGD-----MVTALGKAMETNPQLSNMMTPFLPT
MSMEG_2204|M.smegmatis_MC2_155      RIRVNSLHPGAVNTPMGTGD-----MLAALTRANDTNPGLMQMVTPFLPD
TH_3169|M.thermoresistible__bu      RIRVNSLHPGAVATDMGGGE-----MVSALAATGESNPPLTQMITPFLPD
MAV_5244|M.avium_104                NIRVNSLNPGAVATPMGTGR-----MRDALRAAADDYPHLRGLHKPLLPE
Mb2771|M.bovis_AF2122/97            NIRVNSVHPCGVDTPMINNE----FFQQWLT---TADMDAPHNLGNALPV
Rv2750|M.tuberculosis_H37Rv         NIRVNSVHPCGVDTPMINNE----FFQQWLT---TADMDAPHNLGNALPV
MUL_3392|M.ulcerans_Agy99           SIRVNSLHPSGVDPPMINNE----FIRHWLADL-VAETGSGPGAGNALPV
MMAR_4754|M.marinum_M               MIRVNSVHPTHVRTPMLHNEGTFKMFRPDLENPGPDDMAPICQLFHTLPI
MAB_3844c|M.abscessus_ATCC_199      GIRVNSIHPYGVTTPMITGD----AMMKILAEHPNYLPSIAP--MPLSPT
MLBr_01807|M.leprae_Br4923          SITANVVAPGFIDTEMTRAM---------------DSKYQEAALQAIPLG
                                     * .* : *  : . *                                  

Mflv_4371|M.gilvum_PYR-GCK          WAVEPEDIADAVCWLASDESKFVTASAISVDQGSTHY-
Mvan_1973|M.vanbaalenii_PYR-1       WAVEPEDIADAVCWLASDESKFVTASAISVDQGSTHY-
MSMEG_2204|M.smegmatis_MC2_155      YIAEPEDIADAAVWLASDESRFVTASRVAVDLGSTQF-
TH_3169|M.thermoresistible__bu      WIAQVDDIADAAVWLASDESRFVTAAKIPVDMGSSQF-
MAV_5244|M.avium_104                GIAQPEDIADAVAWLASDQSRLVTASQVSVDLGVGYV-
Mb2771|M.bovis_AF2122/97            ELVQPTDIANAVAWLASEEARYVTGVTLPVDAGFVNKR
Rv2750|M.tuberculosis_H37Rv         ELVQPTDIANAVAWLASEEARYVTGVTLPVDAGFVNKR
MUL_3392|M.ulcerans_Agy99           QILQADDIAGALAWLVSDEARYITGVALPVDAGCVNKR
MMAR_4754|M.marinum_M               PWVEAEDISNAVLFLASDESRYITGVTLPVDAGGCLK-
MAB_3844c|M.abscessus_ATCC_199      KMLEPDEISDVVLWLASDASGTLAGAQVPVDKGHLTY-
MLBr_01807|M.leprae_Br4923          RIGAVEEIAGAVSFLASEDAGYISGAVIPVDGGLGMGH
                                          :*:..  :*.*: :  ::.  :.** *