For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NAPDARRGGLEVWAPSVVPPIGVELSDEQALAVAFRHLAGIGFAENMAGHITWQRDGRTDMFVNPWGLWW QEITASDICVVDGDARVVRGRWDVTPAIHIHTELHRVRDDARVVIHNHPYYVCVLAALGTLPELVHQTGS LFLDDLCLVDTYDGEIDTPARAADLAARIGGANLTILANHGVIATGRNLPEAVYRAASIERVCKLAYDVM LTGREPVSMNWSDMAGMQRSLIERAADVYWAGAARMTIKADPDVLQ*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2994 | - | - | 100% (257) | putative class II aldolase |
M. avium 104 | MAV_3452 | - | 8e-18 | 27.51% (189) | hypothetical protein MAV_3452 |
M. avium 104 | MAV_4439 | - | 5e-10 | 23.04% (217) | L-fuculose-phosphate aldolase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0748c | fucA | 3e-10 | 23.94% (213) | L-fuculose-phosphate aldolase |
M. gilvum PYR-GCK | Mflv_0622 | - | 2e-05 | 25.48% (208) | class II aldolase/adducin family protein |
M. tuberculosis H37Rv | Rv0727c | fucA | 3e-10 | 23.94% (213) | L-fuculose-phosphate aldolase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2912c | - | 3e-21 | 32.43% (185) | aldolase |
M. marinum M | MMAR_2617 | araD | 1e-134 | 87.89% (256) | ribulose-5-phosphate 4-epimerase, AraD |
M. smegmatis MC2 155 | MSMEG_6863 | - | 2e-14 | 28.11% (249) | hypothetical protein MSMEG_6863 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3144 | araD | 1e-134 | 87.89% (256) | ribulose-5-phosphate 4-epimerase, AraD |
M. vanbaalenii PYR-1 | Mvan_0451 | - | 8e-18 | 26.72% (232) | hypothetical protein Mvan_0451 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2617|M.marinum_M -----------------MNAPDARQGGLQVWAPSVIPPIGVELSDAQALA MUL_3144|M.ulcerans_Agy99 MPKGSFATIFEPGWRPSMNAPDARQGGLQVWAPSVIPPIGVELSDAQALA MAV_2994|M.avium_104 -----------------MNAPDARRGGLEVWAPSVVPPIGVELSDEQALA MAB_2912c|M.abscessus_ATCC_199 -----MTSGNVVAGEELSAYMVGSADGVQLGPAAAETVTQERERRLRELA MSMEG_6863|M.smegmatis_MC2_155 ------------------------MKMEQRSPAPTEAELR------RELA Mb0748c|M.bovis_AF2122/97 ---------------------------MNFVDDPES-----------AVL Rv0727c|M.tuberculosis_H37Rv ---------------------------MNFVDAPES-----------AVL Mvan_0451|M.vanbaalenii_PYR-1 --------MTSTMHDSKSDLMRRALDGLSRNVTESSLTLR------EKLA Mflv_0622|M.gilvum_PYR-GCK ---------------------------MSSTPSGAGLDTER-----HAIA . : MMAR_2617|M.marinum_M VAFRHLAGIGFAENMAGHITWQ-PDGQTDMLVN---PWGLWWQELTASDI MUL_3144|M.ulcerans_Agy99 VAFRHLAGIGFAENMAGHITWQ-PDGQTDMLVN---PWGLWWQELTASDI MAV_2994|M.avium_104 VAFRHLAGIGFAENMAGHITWQ-RDGRTDMFVN---PWGLWWQEITASDI MAB_2912c|M.abscessus_ATCC_199 AAFRIFGTFGFSEGVAGHITVRDPEFPDTFWVN---PFGMNFRHITVSDL MSMEG_6863|M.smegmatis_MC2_155 AVYRLVAHYRMTDLVFTHISVRLPGNDHHFLIN---PYGLLFEEITASSL Mb0748c|M.bovis_AF2122/97 AAAKDMLRRGLVEGTAGNISAR--RSDGNVVIT---PSSVDYAEMLLHDL Rv0727c|M.tuberculosis_H37Rv AAAKDMLRRGLVEGTAGNISAR--RSDGNVVIT---PSSVDYAEMLLHDL Mvan_0451|M.vanbaalenii_PYR-1 VTCRALFDAGHDSGLAGQITAR-AEAPGTYYTQ---RLGLGFDEITAGNL Mflv_0622|M.gilvum_PYR-GCK LACRVLAARDLAPGILGHISLRVDRDRLLIRCRGPRERGLAFTSAEDIRM . : . :*: : .: : : MMAR_2617|M.marinum_M CTVDADARVVKGR---WDVTPAIHIHTQLHRVRDDARVVIHNHPYYVCVL MUL_3144|M.ulcerans_Agy99 CTVDADARVVKGR---WDVTPAIHIHTQLHRVRDDARVVIHNHPYYVCVL MAV_2994|M.avium_104 CVVDGDARVVRGR---WDVTPAIHIHTELHRVRDDARVVIHNHPYYVCVL MAB_2912c|M.abscessus_ATCC_199 IQVDHDGNVITGS-R-PVNRAAFCIHSEVHKARPDVIAAAHAHSVHGKAF MSMEG_6863|M.smegmatis_MC2_155 VRVDLNGNVIGETPY-CVNPAGFVIHSAIHAAREDAACVLHTHTLAGCAV Mb0748c|M.bovis_AF2122/97 VLVDAGGAVLHAKDG-RSPSTELNLHLACYRAFDDIGSVIHSHPVWATMF Rv0727c|M.tuberculosis_H37Rv VLVDAGGAVLHAKDG-RSPSTELNLHLACYRAFDDIGSVIHSHPVWATMF Mvan_0451|M.vanbaalenii_PYR-1 LLVDEDLKVLDGE---GMANPANRFHSWIYRARPDVNCIVHTHPFHVAAL Mflv_0622|M.gilvum_PYR-GCK VTLDGTAGGKGELDDGYQPPNELPLHTEVLRTRRDVNAVVHAHPEAVVAA :* :* . * * *. MMAR_2617|M.marinum_M AALGRLPDLVH--QTGSLFLDDMCLVESYDG--EIDSAARAADLAAHIGS MUL_3144|M.ulcerans_Agy99 AALGRLPDLVH--QTGSLFLDDMCLVESYDG--EIDSAARAADLAAHIGS MAV_2994|M.avium_104 AALGTLPELVH--QTGSLFLDDLCLVDTYDG--EIDTPARAADLAARIGG MAB_2912c|M.abscessus_ATCC_199 SSLGQPLLPIT--QDACAFYQDHAVYTDYRG--VVGDLEEGRAIGSALGP MSMEG_6863|M.smegmatis_MC2_155 AASASGLLPVN--QISMEFFN-RVGYHDYEG--VALNLDEQKRLVEDLGT Mb0748c|M.bovis_AF2122/97 AVAHEPIPACI--DEFAIYCGGDVRCTEYA---ASGTPEVGRNAVRALEG Rv0727c|M.tuberculosis_H37Rv AVAHEPIPACI--DEFAIYCGGDVRCTEYA---ASGTPEVGRNAVRALEG Mvan_0451|M.vanbaalenii_PYR-1 SMLEVPLVVSQ--MDIAPLYGDCAFLPDWPG--VPVGNEEGEIISAALGD Mflv_0622|M.gilvum_PYR-GCK DLAGLAVRPIVGAFDIPGFRLAAAGVPVYRRGVLVRNRQLAQEMVAAMAD : : MMAR_2617|M.marinum_M ANLTILANHGVIATGRNLAQAVYRAASIERVCKLAYDVMLTGA----EPT MUL_3144|M.ulcerans_Agy99 ANLTILANHGVIATGRNLAQAVYRAASIEQVCKLAYDVMLTGA----EPT MAV_2994|M.avium_104 ANLTILANHGVIATGRNLPEAVYRAASIERVCKLAYDVMLTGR----EPV MAB_2912c|M.abscessus_ATCC_199 AKAVILQNHGLLTVGHSVAEAAWWFITMERSCQAQLLAMAAGE-----PR MSMEG_6863|M.smegmatis_MC2_155 HDALILRNHGLLTVGATPARAFLRMYYLNKACEIQIAASQLGELVIPDPR Mb0748c|M.bovis_AF2122/97 RAAALIANHGLVAVGPRPDQVLRVTALVERTAQIVWGARALGG-----PV Rv0727c|M.tuberculosis_H37Rv RAAALIANHGLVAVGPRPDQVLRVTALVERTAQIVWGARALGG-----PV Mvan_0451|M.vanbaalenii_PYR-1 KKAILLAHHGHVVAGASVEEACSLAMLVERGAKLQLAAMAAGT-----IA Mflv_0622|M.gilvum_PYR-GCK RPVVVLRAHGLTSAADTVERAVLQAISVDTISRLSLQIASAGG----TLA :: ** .. .. :: .. * MMAR_2617|M.marinum_M QMKWSDMAAMRSSLIERAADVY-----WAGAARMTIKADPAVLS-- MUL_3144|M.ulcerans_Agy99 QMKWSDMAGMRSSLIERAADVY-----WAGAARMTIKADPAVLS-- MAV_2994|M.avium_104 SMNWSDMAGMQRSLIERAADVY-----WAGAARMTIKADPDVLQ-- MAB_2912c|M.abscessus_ATCC_199 TIDHDTAVSVYNQIGTPVAGWFQFQPLWDDVIRTAPEALH------ MSMEG_6863|M.smegmatis_MC2_155 IIEHAAQQLVGDAAGDDYTDDVGYDLAWAAMVRMLDRTQPDYRD-- Mb0748c|M.bovis_AF2122/97 PIPEDVCRNFTGVYGYLRANPL------------------------ Rv0727c|M.tuberculosis_H37Rv PIPEDVCRNFTGVYGYLRANPL------------------------ Mvan_0451|M.vanbaalenii_PYR-1 PLPDRLAREAHDWTLTPKRSQAN----FAYYARRALANHPDALDR- Mflv_0622|M.gilvum_PYR-GCK DLPDADAAELP-DLGNAFNETIAWRHELARLETHGLSCHPSEKRSS :