For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SSTPSGAGLDTERHAIALACRVLAARDLAPGILGHISLRVDRDRLLIRCRGPRERGLAFTSAEDIRMVTL DGTAGGKGELDDGYQPPNELPLHTEVLRTRRDVNAVVHAHPEAVVAADLAGLAVRPIVGAFDIPGFRLAA AGVPVYRRGVLVRNRQLAQEMVAAMADRPVVVLRAHGLTSAADTVERAVLQAISVDTISRLSLQIASAGG TLADLPDADAAELPDLGNAFNETIAWRHELARLETHGLSCHPSEKRSS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0622 | - | - | 100% (259) | class II aldolase/adducin family protein |
M. gilvum PYR-GCK | Mflv_0540 | - | e-145 | 100.00% (259) | class II aldolase/adducin family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0748c | fucA | 1e-06 | 22.77% (202) | L-fuculose-phosphate aldolase |
M. tuberculosis H37Rv | Rv0727c | fucA | 8e-07 | 22.77% (202) | L-fuculose-phosphate aldolase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1048c | - | 2e-13 | 30.73% (218) | class II aldolase/adducin domain protein |
M. marinum M | MMAR_2153 | - | 2e-10 | 28.84% (215) | hypothetical protein MMAR_2153 |
M. avium 104 | MAV_3514 | - | 1e-76 | 60.17% (236) | FliH protein |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_0822 | fucA | 7e-08 | 23.22% (211) | L-fuculose-phosphate aldolase |
M. vanbaalenii PYR-1 | Mvan_0543 | - | 1e-145 | 100.00% (259) | class II aldolase/adducin family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb0748c|M.bovis_AF2122/97 --MNFVD----------------------DPESAVLAAAKDMLRRGLVEG Rv0727c|M.tuberculosis_H37Rv --MNFVD----------------------APESAVLAAAKDMLRRGLVEG MUL_0822|M.ulcerans_Agy99 --MKFVD----------------------NAQVAVLAAAKDMLRRGLVEG MAB_1048c|M.abscessus_ATCC_199 MASTLHDTKSELMDRAERSMQTHFSDSQWTTRQKVALTCRALFDRGHDSG MMAR_2153|M.marinum_M MATTFSDSKSELMRRAQERLDAQTPESQLTTRQKVALTCRVLFDAGHDSG Mflv_0622|M.gilvum_PYR-GCK MSSTPSGA------------------GLDTERHAIALACRVLAARDLAPG Mvan_0543|M.vanbaalenii_PYR-1 MSSTPSGA------------------GLDTERHAIALACRVLAARDLAPG MAV_3514|M.avium_104 MSGR-----------------------LDEQRALVAQGCRVAAAHGLVDG . : .: . * Mb0748c|M.bovis_AF2122/97 TAGNISARRSD-GNVVITP----SSVDYAEMLLHDLVLVD-AGGAVLHAK Rv0727c|M.tuberculosis_H37Rv TAGNISARRSD-GNVVITP----SSVDYAEMLLHDLVLVD-AGGAVLHAK MUL_0822|M.ulcerans_Agy99 TAGNISARCAD-GNLVITP----SSVDYADMTLDDLVQVD-ADGTVLHAK MAB_1048c|M.abscessus_ATCC_199 LAGQITARAEEPGTFYTQR----LGLGFDEITEENLLLVD-EDLNVLEGS MMAR_2153|M.marinum_M LAGQITARAQRPGTYYTQQ----LGLGFDEITEDNLLLVD-EDLNVLEGS Mflv_0622|M.gilvum_PYR-GCK ILGHISLRVDRDRLLIRCRGPRERGLAFTSAEDIRMVTLDGTAGGKGELD Mvan_0543|M.vanbaalenii_PYR-1 ILGHISLRVDRDRLLIRCRGPRERGLAFTSAEDIRMVTLDGTAGGKGELD MAV_3514|M.avium_104 ILGHVSLRIDDERLLVRCRSDTDDGVAFTRPGDIRLVRFDGTAGAPGELD *::: * .: : :: .* . . Mb0748c|M.bovis_AF2122/97 DGRSPSTELNLHLACYRAFDDIGSVIHSHPVWATMFAVAHEPIPACIDEF Rv0727c|M.tuberculosis_H37Rv DGRSPSTELNLHLACYRAFDDIGSVIHSHPVWATMFAVAHEPIPACIDEF MUL_0822|M.ulcerans_Agy99 AGRAPSTEMHLHLACYQAFDDIGSVIHSHPVWATMFAIAHQPIPACIDEF MAB_1048c|M.abscessus_ATCC_199 GMANP--ANRFHSWIYRARPDVQCIVHTHPFHVAALSMLETPLIVSQMDI MMAR_2153|M.marinum_M AMANP--ANRFHSWIYRERPDVQCIVHTHGFHTAALSMLKVPLIVSHMDT Mflv_0622|M.gilvum_PYR-GCK DGYQPPNELPLHTEVLRTRRDVNAVVHAHPEAVVAADLAGLAVRPIVGAF Mvan_0543|M.vanbaalenii_PYR-1 DGYQPPNELPLHTEVLRTRRDVNAVVHAHPEAVVAADLAGLAVRPIVGAF MAV_3514|M.avium_104 -GYRVPNELPIHVETMLADPRHTAVAHLHPPAVVAADLAGITLRPIYGAH :* .: * * .. : .: Mb0748c|M.bovis_AF2122/97 AI----YCGGDVRCTEYAASGTP-EVGRNAVRALEGRAAALIANHGLVAV Rv0727c|M.tuberculosis_H37Rv AI----YCGGDVRCTEYAASGTP-EVGRNAVRALEGRAAALIANHGLVAV MUL_0822|M.ulcerans_Agy99 AV----YCGGDVRCAEYAASGTP-EVGRNAVAALQGRAAALIANHGLVAV MAB_1048c|M.abscessus_ATCC_199 AP----LYDDCAFLPDWPGVPVGNEEGEIISAALGDKKAILLAHHGHVVA MMAR_2153|M.marinum_M TP----LYDDCAFLADWPGVPVGNEEGEIISAALGNKKAILLAHHGQLIA Mflv_0622|M.gilvum_PYR-GCK DIPGFRLAAAGVPVYRRGVLVRNRQLAQEMVAAMADRPVVVLRAHGLTSA Mvan_0543|M.vanbaalenii_PYR-1 DIPGFRLAAAGVPVYRRGVLVRNRQLAQEMVAAMADRPVVVLRAHGLTSA MAV_3514|M.avium_104 DIPGARLARGGVPVYERAVLIRDSRLARDMVAAMRGRPVVICRGHGITSA . . .. *: .: . : ** . Mb0748c|M.bovis_AF2122/97 GPRPDQVLRVTALVERTAQIVWGARALG-GPVPIPEDVCRN--------- Rv0727c|M.tuberculosis_H37Rv GPRPDQVLRVTALVERTAQIVWGARALG-GPVPIPEDVCRN--------- MUL_0822|M.ulcerans_Agy99 GPRPDKVLHVTALVERTAQIVWGARALG-GPVPIPEDVNRN--------- MAB_1048c|M.abscessus_ATCC_199 GASVEESCSLAVLIERGAKLQLAAMAAG-TIAPLPDRLAREAHDWTLTPK MMAR_2153|M.marinum_M GISIEEACTLAVLIERAAKLQLAAMSAG-TIAELPDQLAREAHDWTLTPS Mflv_0622|M.gilvum_PYR-GCK ADTVERAVLQAISVDTISRLSLQIASAGGTLADLPDADAAELPDLG---N Mvan_0543|M.vanbaalenii_PYR-1 ADTVERAVLQAISVDTISRLSLQIASAGGTLADLPDADAAELPDLG---N MAV_3514|M.avium_104 AATVPQAVLQAISVDALARMSLRVRAAGGTLRDIADADWDDLPDLG---P . . : :: ::: : * :.: : Mb0748c|M.bovis_AF2122/97 -FTGVYGYLRANPL---------------- Rv0727c|M.tuberculosis_H37Rv -FTGVYGYLRANPL---------------- MUL_0822|M.ulcerans_Agy99 -FAGVYAYLRANPM---------------- MAB_1048c|M.abscessus_ATCC_199 RSIANFAYYARTALAHHPETLTLPTTQGNS MMAR_2153|M.marinum_M RSRANFAYYARRALARHPDALSS------- Mflv_0622|M.gilvum_PYR-GCK AFNETIAWRHELARLETHGLSCHPSEKRSS Mvan_0543|M.vanbaalenii_PYR-1 AFNETIAWRHELARLETHGLSCHPSEKRSS MAV_3514|M.avium_104 AFTAEAAWRHEVARIEG------------- .: .