For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PKGSFATIFEPGWRPSMNAPDARQGGLQVWAPSVIPPIGVELSDAQALAVAFRHLAGIGFAENMAGHITW QPDGQTDMLVNPWGLWWQELTASDICTVDADARVVKGRWDVTPAIHIHTQLHRVRDDARVVIHNHPYYVC VLAALGRLPDLVHQTGSLFLDDMCLVESYDGEIDSAARAADLAAHIGSANLTILANHGVIATGRNLAQAV YRAASIEQVCKLAYDVMLTGAEPTQMKWSDMAGMRSSLIERAADVYWAGAARMTIKADPAVLS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. ulcerans Agy99 | MUL_3144 | araD | - | 100% (274) | ribulose-5-phosphate 4-epimerase, AraD |
| M. ulcerans Agy99 | MUL_0822 | fucA | 2e-10 | 23.08% (195) | L-fuculose-phosphate aldolase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0748c | fucA | 6e-08 | 22.05% (195) | L-fuculose-phosphate aldolase |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | Rv0727c | fucA | 6e-08 | 22.05% (195) | L-fuculose-phosphate aldolase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2912c | - | 3e-21 | 30.16% (189) | aldolase |
| M. marinum M | MMAR_2617 | araD | 1e-149 | 99.22% (257) | ribulose-5-phosphate 4-epimerase, AraD |
| M. avium 104 | MAV_2994 | - | 1e-134 | 87.89% (256) | putative class II aldolase |
| M. smegmatis MC2 155 | MSMEG_6863 | - | 6e-15 | 27.02% (248) | hypothetical protein MSMEG_6863 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0451 | - | 2e-16 | 27.42% (186) | hypothetical protein Mvan_0451 |
CLUSTAL 2.0.9 multiple sequence alignment
MUL_3144|M.ulcerans_Agy99 MPKGSFATIFEPGWRPSMNAPDARQGGLQVWAPSVIPPIGVELSDAQALA
MMAR_2617|M.marinum_M -----------------MNAPDARQGGLQVWAPSVIPPIGVELSDAQALA
MAV_2994|M.avium_104 -----------------MNAPDARRGGLEVWAPSVVPPIGVELSDEQALA
MAB_2912c|M.abscessus_ATCC_199 -----MTSGNVVAGEELSAYMVGSADGVQLGPAAAETVTQERERRLRELA
MSMEG_6863|M.smegmatis_MC2_155 ------------------------MKMEQRSPAPTEAELR------RELA
Mb0748c|M.bovis_AF2122/97 ---------------------------MNFVDDPES-----------AVL
Rv0727c|M.tuberculosis_H37Rv ---------------------------MNFVDAPES-----------AVL
Mvan_0451|M.vanbaalenii_PYR-1 --------MTSTMHDSKSDLMRRALDGLSRNVTESSLTLR------EKLA
. :
MUL_3144|M.ulcerans_Agy99 VAFRHLAGIGFAENMAGHITWQ-PDGQTDMLVNPWGLWWQELTASDICTV
MMAR_2617|M.marinum_M VAFRHLAGIGFAENMAGHITWQ-PDGQTDMLVNPWGLWWQELTASDICTV
MAV_2994|M.avium_104 VAFRHLAGIGFAENMAGHITWQ-RDGRTDMFVNPWGLWWQEITASDICVV
MAB_2912c|M.abscessus_ATCC_199 AAFRIFGTFGFSEGVAGHITVRDPEFPDTFWVNPFGMNFRHITVSDLIQV
MSMEG_6863|M.smegmatis_MC2_155 AVYRLVAHYRMTDLVFTHISVRLPGNDHHFLINPYGLLFEEITASSLVRV
Mb0748c|M.bovis_AF2122/97 AAAKDMLRRGLVEGTAGNISAR--RSDGNVVITPSSVDYAEMLLHDLVLV
Rv0727c|M.tuberculosis_H37Rv AAAKDMLRRGLVEGTAGNISAR--RSDGNVVITPSSVDYAEMLLHDLVLV
Mvan_0451|M.vanbaalenii_PYR-1 VTCRALFDAGHDSGLAGQITAR-AEAPGTYYTQRLGLGFDEITAGNLLLV
.. : . . :*: : .: : .: .: *
MUL_3144|M.ulcerans_Agy99 DADARVVKGR--WDVTPAIHIHTQLHRVRDDARVVIHNHPYYVCVLAALG
MMAR_2617|M.marinum_M DADARVVKGR--WDVTPAIHIHTQLHRVRDDARVVIHNHPYYVCVLAALG
MAV_2994|M.avium_104 DGDARVVRGR--WDVTPAIHIHTELHRVRDDARVVIHNHPYYVCVLAALG
MAB_2912c|M.abscessus_ATCC_199 DHDGNVITGS-RPVNRAAFCIHSEVHKARPDVIAAAHAHSVHGKAFSSLG
MSMEG_6863|M.smegmatis_MC2_155 DLNGNVIGETPYCVNPAGFVIHSAIHAAREDAACVLHTHTLAGCAVAASA
Mb0748c|M.bovis_AF2122/97 DAGGAVLHAKDGRSPSTELNLHLACYRAFDDIGSVIHSHPVWATMFAVAH
Rv0727c|M.tuberculosis_H37Rv DAGGAVLHAKDGRSPSTELNLHLACYRAFDDIGSVIHSHPVWATMFAVAH
Mvan_0451|M.vanbaalenii_PYR-1 DEDLKVLDGE--GMANPANRFHSWIYRARPDVNCIVHTHPFHVAALSMLE
* . *: . :* : . * * *. .:
MUL_3144|M.ulcerans_Agy99 RLPDLVHQTGSLFLDDMCLVESYDGEIDSAARAADLAAHIGSANLTILAN
MMAR_2617|M.marinum_M RLPDLVHQTGSLFLDDMCLVESYDGEIDSAARAADLAAHIGSANLTILAN
MAV_2994|M.avium_104 TLPELVHQTGSLFLDDLCLVDTYDGEIDTPARAADLAARIGGANLTILAN
MAB_2912c|M.abscessus_ATCC_199 QPLLPITQDACAFYQDHAVYTDYRGVVGDLEEGRAIGSALGPAKAVILQN
MSMEG_6863|M.smegmatis_MC2_155 SGLLPVNQISMEFFN-RVGYHDYEGVALNLDEQKRLVEDLGTHDALILRN
Mb0748c|M.bovis_AF2122/97 EPIPACIDEFAIYCGGDVRCTEYA-ASGTPEVGRNAVRALEGRAAALIAN
Rv0727c|M.tuberculosis_H37Rv EPIPACIDEFAIYCGGDVRCTEYA-ASGTPEVGRNAVRALEGRAAALIAN
Mvan_0451|M.vanbaalenii_PYR-1 VPLVVSQMDIAPLYGDCAFLPDWPGVPVGNEEGEIISAALGDKKAILLAH
: : :: :
MUL_3144|M.ulcerans_Agy99 HGVIATGRNLAQAVYRAASIEQVCKLAYDVMLTGA----EPTQMKWSDMA
MMAR_2617|M.marinum_M HGVIATGRNLAQAVYRAASIERVCKLAYDVMLTGA----EPTQMKWSDMA
MAV_2994|M.avium_104 HGVIATGRNLPEAVYRAASIERVCKLAYDVMLTGR----EPVSMNWSDMA
MAB_2912c|M.abscessus_ATCC_199 HGLLTVGHSVAEAAWWFITMERSCQAQLLAMAAGE-----PRTIDHDTAV
MSMEG_6863|M.smegmatis_MC2_155 HGLLTVGATPARAFLRMYYLNKACEIQIAASQLGELVIPDPRIIEHAAQQ
Mb0748c|M.bovis_AF2122/97 HGLVAVGPRPDQVLRVTALVERTAQIVWGARALGG-----PVPIPEDVCR
Rv0727c|M.tuberculosis_H37Rv HGLVAVGPRPDQVLRVTALVERTAQIVWGARALGG-----PVPIPEDVCR
Mvan_0451|M.vanbaalenii_PYR-1 HGHVVAGASVEEACSLAMLVERGAKLQLAAMAAGT-----IAPLPDRLAR
** :..* .. ::: .: . * :
MUL_3144|M.ulcerans_Agy99 GMRSSLIERAADVY-----WAGAARMTIKADPAVLS-
MMAR_2617|M.marinum_M AMRSSLIERAADVY-----WAGAARMTIKADPAVLS-
MAV_2994|M.avium_104 GMQRSLIERAADVY-----WAGAARMTIKADPDVLQ-
MAB_2912c|M.abscessus_ATCC_199 SVYNQIGTPVAGWFQFQPLWDDVIRTAPEALH-----
MSMEG_6863|M.smegmatis_MC2_155 LVGDAAGDDYTDDVGYDLAWAAMVRMLDRTQPDYRD-
Mb0748c|M.bovis_AF2122/97 NFTGVYGYLRANPL-----------------------
Rv0727c|M.tuberculosis_H37Rv NFTGVYGYLRANPL-----------------------
Mvan_0451|M.vanbaalenii_PYR-1 EAHDWTLTPKRSQAN----FAYYARRALANHPDALDR
.