For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. ulcerans Agy99 MUL_3144 (araD)

annotation: ribulose-5-phosphate 4-epimerase, AraD
coordinates: 3492746 - 3493570
length: 274

PKGSFATIFEPGWRPSMNAPDARQGGLQVWAPSVIPPIGVELSDAQALAVAFRHLAGIGFAENMAGHITW
QPDGQTDMLVNPWGLWWQELTASDICTVDADARVVKGRWDVTPAIHIHTQLHRVRDDARVVIHNHPYYVC
VLAALGRLPDLVHQTGSLFLDDMCLVESYDGEIDSAARAADLAAHIGSANLTILANHGVIATGRNLAQAV
YRAASIEQVCKLAYDVMLTGAEPTQMKWSDMAGMRSSLIERAADVYWAGAARMTIKADPAVLS*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. ulcerans Agy99MUL_3144araD-100% (274)ribulose-5-phosphate 4-epimerase, AraD
M. ulcerans Agy99MUL_0822fucA2e-1023.08% (195) L-fuculose-phosphate aldolase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0748cfucA6e-0822.05% (195) L-fuculose-phosphate aldolase
M. gilvum PYR-GCK-----
M. tuberculosis H37RvRv0727cfucA6e-0822.05% (195) L-fuculose-phosphate aldolase
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_2912c-3e-2130.16% (189) aldolase
M. marinum MMMAR_2617araD1e-14999.22% (257) ribulose-5-phosphate 4-epimerase, AraD
M. avium 104MAV_2994-1e-13487.89% (256) putative class II aldolase
M. smegmatis MC2 155MSMEG_6863-6e-1527.02% (248) hypothetical protein MSMEG_6863
M. thermoresistible (build 8)-----
M. vanbaalenii PYR-1Mvan_0451-2e-1627.42% (186) hypothetical protein Mvan_0451

CLUSTAL 2.0.9 multiple sequence alignment


MUL_3144|M.ulcerans_Agy99           MPKGSFATIFEPGWRPSMNAPDARQGGLQVWAPSVIPPIGVELSDAQALA
MMAR_2617|M.marinum_M               -----------------MNAPDARQGGLQVWAPSVIPPIGVELSDAQALA
MAV_2994|M.avium_104                -----------------MNAPDARRGGLEVWAPSVVPPIGVELSDEQALA
MAB_2912c|M.abscessus_ATCC_199      -----MTSGNVVAGEELSAYMVGSADGVQLGPAAAETVTQERERRLRELA
MSMEG_6863|M.smegmatis_MC2_155      ------------------------MKMEQRSPAPTEAELR------RELA
Mb0748c|M.bovis_AF2122/97           ---------------------------MNFVDDPES-----------AVL
Rv0727c|M.tuberculosis_H37Rv        ---------------------------MNFVDAPES-----------AVL
Mvan_0451|M.vanbaalenii_PYR-1       --------MTSTMHDSKSDLMRRALDGLSRNVTESSLTLR------EKLA
                                                                .                   : 

MUL_3144|M.ulcerans_Agy99           VAFRHLAGIGFAENMAGHITWQ-PDGQTDMLVNPWGLWWQELTASDICTV
MMAR_2617|M.marinum_M               VAFRHLAGIGFAENMAGHITWQ-PDGQTDMLVNPWGLWWQELTASDICTV
MAV_2994|M.avium_104                VAFRHLAGIGFAENMAGHITWQ-RDGRTDMFVNPWGLWWQEITASDICVV
MAB_2912c|M.abscessus_ATCC_199      AAFRIFGTFGFSEGVAGHITVRDPEFPDTFWVNPFGMNFRHITVSDLIQV
MSMEG_6863|M.smegmatis_MC2_155      AVYRLVAHYRMTDLVFTHISVRLPGNDHHFLINPYGLLFEEITASSLVRV
Mb0748c|M.bovis_AF2122/97           AAAKDMLRRGLVEGTAGNISAR--RSDGNVVITPSSVDYAEMLLHDLVLV
Rv0727c|M.tuberculosis_H37Rv        AAAKDMLRRGLVEGTAGNISAR--RSDGNVVITPSSVDYAEMLLHDLVLV
Mvan_0451|M.vanbaalenii_PYR-1       VTCRALFDAGHDSGLAGQITAR-AEAPGTYYTQRLGLGFDEITAGNLLLV
                                    .. : .      .    :*: :             .: : .:   .:  *

MUL_3144|M.ulcerans_Agy99           DADARVVKGR--WDVTPAIHIHTQLHRVRDDARVVIHNHPYYVCVLAALG
MMAR_2617|M.marinum_M               DADARVVKGR--WDVTPAIHIHTQLHRVRDDARVVIHNHPYYVCVLAALG
MAV_2994|M.avium_104                DGDARVVRGR--WDVTPAIHIHTELHRVRDDARVVIHNHPYYVCVLAALG
MAB_2912c|M.abscessus_ATCC_199      DHDGNVITGS-RPVNRAAFCIHSEVHKARPDVIAAAHAHSVHGKAFSSLG
MSMEG_6863|M.smegmatis_MC2_155      DLNGNVIGETPYCVNPAGFVIHSAIHAAREDAACVLHTHTLAGCAVAASA
Mb0748c|M.bovis_AF2122/97           DAGGAVLHAKDGRSPSTELNLHLACYRAFDDIGSVIHSHPVWATMFAVAH
Rv0727c|M.tuberculosis_H37Rv        DAGGAVLHAKDGRSPSTELNLHLACYRAFDDIGSVIHSHPVWATMFAVAH
Mvan_0451|M.vanbaalenii_PYR-1       DEDLKVLDGE--GMANPANRFHSWIYRARPDVNCIVHTHPFHVAALSMLE
                                    * .  *:         .   :*   : .  *     * *.     .:   

MUL_3144|M.ulcerans_Agy99           RLPDLVHQTGSLFLDDMCLVESYDGEIDSAARAADLAAHIGSANLTILAN
MMAR_2617|M.marinum_M               RLPDLVHQTGSLFLDDMCLVESYDGEIDSAARAADLAAHIGSANLTILAN
MAV_2994|M.avium_104                TLPELVHQTGSLFLDDLCLVDTYDGEIDTPARAADLAARIGGANLTILAN
MAB_2912c|M.abscessus_ATCC_199      QPLLPITQDACAFYQDHAVYTDYRGVVGDLEEGRAIGSALGPAKAVILQN
MSMEG_6863|M.smegmatis_MC2_155      SGLLPVNQISMEFFN-RVGYHDYEGVALNLDEQKRLVEDLGTHDALILRN
Mb0748c|M.bovis_AF2122/97           EPIPACIDEFAIYCGGDVRCTEYA-ASGTPEVGRNAVRALEGRAAALIAN
Rv0727c|M.tuberculosis_H37Rv        EPIPACIDEFAIYCGGDVRCTEYA-ASGTPEVGRNAVRALEGRAAALIAN
Mvan_0451|M.vanbaalenii_PYR-1       VPLVVSQMDIAPLYGDCAFLPDWPGVPVGNEEGEIISAALGDKKAILLAH
                                                          :                :      :: :

MUL_3144|M.ulcerans_Agy99           HGVIATGRNLAQAVYRAASIEQVCKLAYDVMLTGA----EPTQMKWSDMA
MMAR_2617|M.marinum_M               HGVIATGRNLAQAVYRAASIERVCKLAYDVMLTGA----EPTQMKWSDMA
MAV_2994|M.avium_104                HGVIATGRNLPEAVYRAASIERVCKLAYDVMLTGR----EPVSMNWSDMA
MAB_2912c|M.abscessus_ATCC_199      HGLLTVGHSVAEAAWWFITMERSCQAQLLAMAAGE-----PRTIDHDTAV
MSMEG_6863|M.smegmatis_MC2_155      HGLLTVGATPARAFLRMYYLNKACEIQIAASQLGELVIPDPRIIEHAAQQ
Mb0748c|M.bovis_AF2122/97           HGLVAVGPRPDQVLRVTALVERTAQIVWGARALGG-----PVPIPEDVCR
Rv0727c|M.tuberculosis_H37Rv        HGLVAVGPRPDQVLRVTALVERTAQIVWGARALGG-----PVPIPEDVCR
Mvan_0451|M.vanbaalenii_PYR-1       HGHVVAGASVEEACSLAMLVERGAKLQLAAMAAGT-----IAPLPDRLAR
                                    ** :..*    ..      ::: .:    .   *         :      

MUL_3144|M.ulcerans_Agy99           GMRSSLIERAADVY-----WAGAARMTIKADPAVLS-
MMAR_2617|M.marinum_M               AMRSSLIERAADVY-----WAGAARMTIKADPAVLS-
MAV_2994|M.avium_104                GMQRSLIERAADVY-----WAGAARMTIKADPDVLQ-
MAB_2912c|M.abscessus_ATCC_199      SVYNQIGTPVAGWFQFQPLWDDVIRTAPEALH-----
MSMEG_6863|M.smegmatis_MC2_155      LVGDAAGDDYTDDVGYDLAWAAMVRMLDRTQPDYRD-
Mb0748c|M.bovis_AF2122/97           NFTGVYGYLRANPL-----------------------
Rv0727c|M.tuberculosis_H37Rv        NFTGVYGYLRANPL-----------------------
Mvan_0451|M.vanbaalenii_PYR-1       EAHDWTLTPKRSQAN----FAYYARRALANHPDALDR
                                               .