For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MKRLEGKRILVTGAASGIGQATALRLLDEGAAVAASDVAVDGLERTRDRAAQAGTAERLVTVTMDVGRED AVVDGVRVAVEQLGGLDSLVNAAGMLRAAHTHQTSLQLWNQIIGVNLTGTFLVVREALPALLDNARSAVV NFSSTSASFAHPYMAAYAASKGGIQAFTHSLALEYARRGLRAVCVAPGSIKSGITDATGGYIPEDADWSL FSRLLPVLPTTVESSGTGMAEPTAVAGVIAMLVSDDGAFITGTEIRIDGGTHA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_0672 | - | - | 100% (263) | oxidoreductase |
M. avium 104 | MAV_3034 | - | 3e-79 | 56.27% (263) | oxidoreductase |
M. avium 104 | MAV_1572 | - | 1e-32 | 35.14% (259) | short chain dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1385 | fabG | 3e-30 | 34.50% (258) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. gilvum PYR-GCK | Mflv_4541 | - | 1e-76 | 56.93% (267) | short-chain dehydrogenase/reductase SDR |
M. tuberculosis H37Rv | Rv1350 | fabG | 3e-30 | 34.50% (258) | 3-ketoacyl-(acyl-carrier-protein) reductase |
M. leprae Br4923 | MLBr_01740 | - | 2e-21 | 32.81% (192) | short chain dehydrogenase |
M. abscessus ATCC 19977 | MAB_4680c | - | 4e-24 | 29.57% (257) | putative short-chain dehydrogenase/reductase |
M. marinum M | MMAR_4967 | - | 1e-116 | 79.85% (263) | short-chain type dehydrogenase/reductase |
M. smegmatis MC2 155 | MSMEG_2852 | - | 9e-79 | 58.05% (267) | 3-oxoacyl- |
M. thermoresistible (build 8) | TH_2959 | - | 2e-77 | 58.58% (268) | PUTATIVE short-chain dehydrogenase/reductase SDR |
M. ulcerans Agy99 | MUL_4041 | - | 1e-117 | 80.23% (263) | short-chain type dehydrogenase/reductase |
M. vanbaalenii PYR-1 | Mvan_2848 | - | 2e-76 | 56.13% (269) | short-chain dehydrogenase/reductase SDR |
CLUSTAL 2.0.9 multiple sequence alignment Mb1385|M.bovis_AF2122/97 ----------MASLLNARTAVITGGAQGLGLAIGQRFVAEGARVVLGDVN Rv1350|M.tuberculosis_H37Rv ----------MASLLNARTAVITGGAQGLGLAIGQRFVAEGARVVLGDVN MAB_4680c|M.abscessus_ATCC_199 -------MNGNSALLQGKNVIVTGGARGLGAAFSRHIVSQGGRVVIADVL MMAR_4967|M.marinum_M -----------MTRLVGQRILVTGAGSGIGQATVLRLLDEGATVVGADID MUL_4041|M.ulcerans_Agy99 -----------MTRLVGQRILVTGAGSGIGQATVLRLLDEGATVVGADID MAV_0672|M.avium_104 -----------MKRLEGKRILVTGAASGIGQATALRLLDEGAAVAASDVA Mflv_4541|M.gilvum_PYR-GCK ------------MRYSGRRVLITGGGSGIGQACALRILAEGGRVAAADIS Mvan_2848|M.vanbaalenii_PYR-1 MSATPTGSSPQLTRYAGRRVLITGGGSGIGQACVLRILAEGGRVVAADIS MSMEG_2852|M.smegmatis_MC2_155 MPDLQAESPIAPSRYAGRRVLITGGGSGIGQACVLRILAEGAQVVAADIS TH_2959|M.thermoresistible__bu -------VSDLSARYAARRVLITGGGSGIGQACVLRILAEGGRVAAADIS MLBr_01740|M.leprae_Br4923 -------MVKTAQYFVGKRCFVTGAASGIGRATALRLAAYGAELYLTDRH .: .:**.. *:* * :: *. : * Mb1385|M.bovis_AF2122/97 LE---ATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVM Rv1350|M.tuberculosis_H37Rv LE---ATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVM MAB_4680c|M.abscessus_ATCC_199 DG---DGRQLAAELG--DAARFTHLDVTDAEQWRELIDTTLAGFGTITGL MMAR_4967|M.marinum_M AAGLSRTQARTAEAGTGARLTTCQIDVADEKSVVDGVGAAVQALGGLDAL MUL_4041|M.ulcerans_Agy99 ADGLSRTQARTAEAGTGARLTTCQIDVADEKSVVDGVGAAVQALGGLDAL MAV_0672|M.avium_104 VDGLERTRDRAAQAGTAERLVTVTMDVGREDAVVDGVRVAVEQLGGLDSL Mflv_4541|M.gilvum_PYR-GCK GDGLADTVQKAGDLAT--NLMTVVMDVGDEPSVSSGVAEAIAALGGLDTL Mvan_2848|M.vanbaalenii_PYR-1 ADGLADTAEKAGALGT--GLSTVVMDVGDEQSVSAGLAEALNTLGGLDTL MSMEG_2852|M.smegmatis_MC2_155 PEGLDDTTGKAGEFSS--RLTTVTLDVGDEDSVRAGVAAAVAELGGLDTL TH_2959|M.thermoresistible__bu PSGLRDTVNQAGAAAE--RLTTVTMDVADEQSVRHGVGQAITALGGLDAL MLBr_01740|M.leprae_Br4923 CDGLAQTVSEARALGA-QVPEYRALDISDYDEVAAFGADIHARHPSMDIV : . *: : : Mb1385|M.bovis_AF2122/97 VNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRG-A Rv1350|M.tuberculosis_H37Rv VNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRG-A MAB_4680c|M.abscessus_ATCC_199 VNNAGISSAAMVADEPLEHFRKVIEINLVGVFIGMQAVIPAMRAHGCG-S MMAR_4967|M.marinum_M VNAAGMLRAAHTHQTSIQQWNQIIAVNLTGTFLVVREALPALLDNQRS-T MUL_4041|M.ulcerans_Agy99 VNAAGMLRAAHTHQTSIQQWNQIIAVNLTGTFLVVREALPALLDNQRS-T MAV_0672|M.avium_104 VNAAGMLRAAHTHQTSLQLWNQIIGVNLTGTFLVVREALPALLDNARS-A Mflv_4541|M.gilvum_PYR-GCK VNAAGILRSAHLADTTLADFEQVLRINLIGTFLVTRESLAALRDGRGP-A Mvan_2848|M.vanbaalenii_PYR-1 VNAAGILRSAHLAQTTLADFEQVLRINLIGTFLVTREAVTALHQGDGS-A MSMEG_2852|M.smegmatis_MC2_155 VNAAGILRSSHLAQTSLADFEQVLRINLTGTFLVTREAIGALLEGHRP-A TH_2959|M.thermoresistible__bu VNAAGILRSAHLVQTTLADFEQVIRINLTGTFLVTRECIPALLDGNGP-A MLBr_01740|M.leprae_Br4923 MNIAGVSVWGTVDRLTHDQWSNVVAINLMGPIHIIETFVPAILAAGRGGH :* **: . . : ::: ::* * . : Mb1385|M.bovis_AF2122/97 IVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPG Rv1350|M.tuberculosis_H37Rv IVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPG MAB_4680c|M.abscessus_ATCC_199 IVNISSAAGLVGLALTSGYGASKWGVRGLSKVAAIELGRERIRVNSVHPG MMAR_4967|M.marinum_M VVNFSSTSAAFAHPYMAAYAASKGGVQAFTHSLALEYARDGLRAVCVAPG MUL_4041|M.ulcerans_Agy99 VVNFSSTSAAFAHPYMAAYAASKGGVQAFTHSLALEYARDGLRAVCVAPG MAV_0672|M.avium_104 VVNFSSTSASFAHPYMAAYAASKGGIQAFTHSLALEYARRGLRAVCVAPG Mflv_4541|M.gilvum_PYR-GCK VVNFSSTSAHFAHPYMAAYAASKGGVLAMTHAWALEFAKAGIRFNCVQPG Mvan_2848|M.vanbaalenii_PYR-1 VVNFSSTSAQFAHPYMAAYAASKGGVLAMTHAWALEFAKAGIRFNCVQPG MSMEG_2852|M.smegmatis_MC2_155 VVNFSSTSAHFAHPYMAAYAASKGGVLAMTHAWALEFAKAGIRFNSVQPG TH_2959|M.thermoresistible__bu VVNFSSTSAHFAHPYMAAYAASKGGVLAMTHTWAAEFAKAGIRFNAVQPG MLBr_01740|M.leprae_Br4923 LVNVSSAAGLVALPWHAAYSASKYGLRGLSEVLRFDLARYRIGVSVVVPG :**.**.:. .. : *.*:* *: .::. : .: : : ** Mb1385|M.bovis_AF2122/97 LIRSAMT---------------EAMPQRIWDQKLAEVP------MGRAGE Rv1350|M.tuberculosis_H37Rv LIRSAMT---------------EAMPQRIWDQKLAEVP------MGRAGE MAB_4680c|M.abscessus_ATCC_199 VIYTPMT---------------AKEGFREGEGNMPIAA------MGRVGN MMAR_4967|M.marinum_M SIKSGITDATGG-------YIPADANWSLFTRLMPILPTTETSSGAGMAD MUL_4041|M.ulcerans_Agy99 SIKSGITDATGG-------YIPADANWSLFTRLMPILPTTETSSGAGMAD MAV_0672|M.avium_104 SIKSGITDATGG-------YIPEDADWSLFSRLLPVLPTTVESSGTGMAE Mflv_4541|M.gilvum_PYR-GCK SISSGMTDGTGASRQSVGPGLPEDADYALFGKVAPMLP---LDDGAIFAA Mvan_2848|M.vanbaalenii_PYR-1 SISSGMTDGTGASRQSIGPGLPEDADYTLFAKVAPMLP---LDGGAIFAA MSMEG_2852|M.smegmatis_MC2_155 SISSGMTDGTGASRQSIGPGLPEDADFSLFGKVAPMLP---LDGGAIFAR TH_2959|M.thermoresistible__bu SISSGMTDGSGVSRQSVGPGLPEDADLALFAKVAPALP---LGDGTIFAD MLBr_01740|M.leprae_Br4923 AVRTPLVDTIEIAG--------VDRQDPRFSRWVDRFR------GHAVSA : : :. . Mb1385|M.bovis_AF2122/97 PSEVASVAVFLASDLSSYMTGTVLDVTGGRFI------------------ Rv1350|M.tuberculosis_H37Rv PSEVASVAVFLASDLSSYMTGTVLDVTGGRFI------------------ MAB_4680c|M.abscessus_ATCC_199 ADEVAGAVAYLLSDAASYVTGAELAVDGGWTAGPTLTTITGQ-------- MMAR_4967|M.marinum_M PSVVAGVIAMLVSEDGAFITGTEIRIDGGTHA------------------ MUL_4041|M.ulcerans_Agy99 PSVVAGVIAMLVSEDGAFITGTEIRIDGGTHA------------------ MAV_0672|M.avium_104 PTAVAGVIAMLVSDDGAFITGTEIRIDGGTHA------------------ Mflv_4541|M.gilvum_PYR-GCK PDAVAGVVAMLGSSDAYFITGTEVRIDGGSHM------------------ Mvan_2848|M.vanbaalenii_PYR-1 PDAVAGVVAMLGSRDAYFITGTEVRIDGGSHM------------------ MSMEG_2852|M.smegmatis_MC2_155 PDAVAGVVAMLGSADAYFITGTEVRIDGGSHM------------------ TH_2959|M.thermoresistible__bu PDAVAGVVAMLGSDDAFFITGTEVRIDGGAHM------------------ MLBr_01740|M.leprae_Br4923 ERAAEKILAGVAKNRYLIYTSHDIRVLYGFKRLAWWPYGVVMKQVNVVFT . . : . *. : : * Mb1385|M.bovis_AF2122/97 ---------------------------------- Rv1350|M.tuberculosis_H37Rv ---------------------------------- MAB_4680c|M.abscessus_ATCC_199 ---------------------------------- MMAR_4967|M.marinum_M ---------------------------------- MUL_4041|M.ulcerans_Agy99 ---------------------------------- MAV_0672|M.avium_104 ---------------------------------- Mflv_4541|M.gilvum_PYR-GCK ---------------------------------- Mvan_2848|M.vanbaalenii_PYR-1 ---------------------------------- MSMEG_2852|M.smegmatis_MC2_155 ---------------------------------- TH_2959|M.thermoresistible__bu ---------------------------------- MLBr_01740|M.leprae_Br4923 RALRPSPATMRCVEPIKVGVYSQPRSGEGGKSGN