For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_4541 (-)

annotation: TetR family transcriptional regulator
coordinates: 4625438 - 4626040
length: 200

MTNLIPESETPNKRERAKADRRDQLLRAAARLLAMRGYARVRLEDLGSAVGISGPAIYRHFPNKEALLVD
LLTDVSRRLLEGGMTVAAAASSPAEALDGLIDFHLDFALNESDLIRVQDRDLDSLPENARRQVRQYQRRY
VEAWVQVLCRSQQGLDESDARIKAHAAFGLMNSTPYSAGRSAPSQTRTVLRQMVVAALRS
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_4541--100% (200)TetR family transcriptional regulator
M. abscessus ATCC 19977MAB_2061c-3e-2637.22% (180) TetR family transcriptional regulator
M. abscessus ATCC 19977MAB_4912c-1e-1022.28% (193) TetR family transcriptional regulator

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2534-3e-5960.91% (197) TetR family transcriptional regulator
M. gilvum PYR-GCKMflv_2551-5e-6160.91% (197) TetR family transcriptional regulator
M. tuberculosis H37RvRv2506-3e-5960.91% (197) TetR family transcriptional regulator
M. leprae Br4923MLBr_01070-2e-0833.77% (77) putative TetR-family transcriptional regulator
M. marinum MMMAR_3853-2e-5960.61% (198) putative regulatory protein
M. avium 104MAV_1669-1e-5660.32% (189) transcriptional regulator, TetR family protein
M. smegmatis MC2 155MSMEG_4718-1e-6160.42% (192) transcriptional regulator, TetR family protein
M. thermoresistible (build 8)TH_2855-4e-1529.15% (199) PUTATIVE -
M. ulcerans Agy99MUL_3785-2e-5959.90% (197) putative regulatory protein
M. vanbaalenii PYR-1Mvan_4092-8e-6060.10% (198) TetR family transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2551|M.gilvum_PYR-GCK          ------------------------MAPTEISSPRSRAKSDRRDQLVAAAE
Mvan_4092|M.vanbaalenii_PYR-1       ------------------------MTTTDATSPRSRAKSDRRGQLIGAAE
MSMEG_4718|M.smegmatis_MC2_155      ------------------------MSS---VTRRSQAKSDRRSQLIAAAE
Mb2534|M.bovis_AF2122/97            ---------------MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAE
Rv2506|M.tuberculosis_H37Rv         ---------------MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAE
MAV_1669|M.avium_104                ------------------------------------MKSDRRLQLLSAAE
MMAR_3853|M.marinum_M               ---------------MAASAPDEQTATP---NRRSQQKSDRRLQLLSAAE
MUL_3785|M.ulcerans_Agy99           ---------------MAASAPDEQTATP---NRRSQQKSDRRLQLLSAAE
MAB_4541|M.abscessus_ATCC_1997      --------------------MTNLIPESETPNKRERAKADRRDQLLRAAA
TH_2855|M.thermoresistible__bu      LSQSPDNATSSSRAGSGAGSGAGSGAEPIGRDTPRRRPRIRPEEIVSAAA
MLBr_01070|M.leprae_Br4923          ------------MIVVGNFTQSNYVPASRGRRSSQLSGDDREQAILAVAE
                                                                            *   :: .* 

Mflv_2551|M.gilvum_PYR-GCK          RLFAEHGYLAVRLEDIGSAAGISGPAVYRHFPNKEALLVELLVGISTRLL
Mvan_4092|M.vanbaalenii_PYR-1       RLIAEHGYLAVRLEDIGAAAGISGPAIYRHFPNKEALLVELLVGISTRLL
MSMEG_4718|M.smegmatis_MC2_155      RLVAERGYLAVRLEDIGAAVGVSGPAIYRHFPNKEAMLVELLVGISTRLL
Mb2534|M.bovis_AF2122/97            RLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL
Rv2506|M.tuberculosis_H37Rv         RLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPNKESLLVELLVGVSARLL
MAV_1669|M.avium_104                RLFAERGFLAVRLEDIGASAGVSGPAIYRHFPNKESLLVELLVGISTRLL
MMAR_3853|M.marinum_M               RLFAERGFLAVRLEDIGAAAGISGPAIYRHFPNKESLLVELLVGISSRLL
MUL_3785|M.ulcerans_Agy99           RLFAERGFLAVRLEDIGAAAGISGPAIYRHFPNKESLLVELLVGISSRLL
MAB_4541|M.abscessus_ATCC_1997      RLLAMRGYARVRLEDLGSAVGISGPAIYRHFPNKEALLVDLLTDVSRRLL
TH_2855|M.thermoresistible__bu      EFFAREGYANVGMRDVAEAVGIRGASLYHHFGSKEEILYAICLTVTKEPN
MLBr_01070|M.leprae_Br4923          RLLAERPLGDFSVDELAKGAGISRPTFYFYFPSKNAVLLSLLDDLNMKSR
                                    .:.* .    . : ::. ..*:  .:.* :* .*: :*  :   :. .  

Mflv_2551|M.gilvum_PYR-GCK          AGATDVVG-ADDDAASTLENLIDFHLDFALDESDLIRIQDRDLGNLPPAA
Mvan_4092|M.vanbaalenii_PYR-1       AGAVEVVDRAGDDADSALEGLIDFHLDFVFGEPDLIRIQDRDLGNLPPAA
MSMEG_4718|M.smegmatis_MC2_155      DGAREVVE-THDDPAKALDALVDFHLDFAFDESDLIRIQDRDLAHLPDTA
Mb2534|M.bovis_AF2122/97            AGARDVTT-RSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVA
Rv2506|M.tuberculosis_H37Rv         AGARDVTT-RSANLAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVA
MAV_1669|M.avium_104                AGARQVRA-RSADAAAALDGLIDFHLDFALNEPDLIRIQDRDLAYLPKPA
MMAR_3853|M.marinum_M               AGARQVTT-NSNDAAAALDGLIDFHLDFALGEPDLIRIQDRDLGHLPAAA
MUL_3785|M.ulcerans_Agy99           AGARQVTT-NSNDAAAALDGLIDFHLDFALGEPDLIRIQDRDLGHLPAAA
MAB_4541|M.abscessus_ATCC_1997      EGGMTVAA-AASSPAEALDGLIDFHLDFALNESDLIRVQDRDLDSLPENA
TH_2855|M.thermoresistible__bu      ELNLPLLD-AAGTPAERLSALIRAHLEHLIRRRVEHLVALHDINSLTPEH
MLBr_01070|M.leprae_Br4923          SAVEALAEQLPADPAAVWRSAITAFFEVCGTHR-AVAVAGAAAKATSPEV
                                         :               :  .::    .     :        .   

Mflv_2551|M.gilvum_PYR-GCK          KRQVRRKQRQYVEIWVDVLRR--CTPGLSEADARLMAHGTFGLLNSTAHS
Mvan_4092|M.vanbaalenii_PYR-1       KRQVRRKQRQYVEIWVDVLRR--RTPGLTETDARLMAHAAFGLLNSTPHG
MSMEG_4718|M.smegmatis_MC2_155      KRQVRRAQRQYVEIWVSVLTR--LRRDLPEEEARVMAHATFGLLNSTPHS
Mb2534|M.bovis_AF2122/97            ERQVRKAQRQYVEVWVGVLRE--LNPGLAEADARLMAHAVFGLLNSTPHS
Rv2506|M.tuberculosis_H37Rv         ERQVRKAQRQYVEVWVGVLRE--LNPGLAEADARLMAHAVFGLLNSTPHS
MAV_1669|M.avium_104                ERQVRKAQRQYVEVWVGVLRE--LNPELAEADARLTAHAVFGLLNSTPHS
MMAR_3853|M.marinum_M               ERQVRKAQRQYVEIWVGVLRQ--LDPGLAEADARLMAHAAFGLLNSTPHS
MUL_3785|M.ulcerans_Agy99           ERQVRKAQRQYVEIWVGVLRQ--LDPGLAEADARLMAHAAFGLLNSTPHS
MAB_4541|M.abscessus_ATCC_1997      RRQVRQYQRRYVEAWVQVLCR--SQQGLDESDARIKAHAAFGLMNSTPYS
TH_2855|M.thermoresistible__bu      RAIIDDLRRYYQRRVRDVIVAGVRSGEFDVPDPKLAALLILDALNGVSGW
MLBr_01070|M.leprae_Br4923          RRLWSTVMQQWIDYNTAAIQAERKCGVAPDTIPAEDLAVALQLMTERVMA
                                    .       : :      .:             .       :  :.     

Mflv_2551|M.gilvum_PYR-GCK          MKPGTT--KT--AEAGSRTVLREMTVAALTSAERRRG
Mvan_4092|M.vanbaalenii_PYR-1       VKPGLN--KA--AEASSRTVLRTMTVAALTSAGRRA-
MSMEG_4718|M.smegmatis_MC2_155      VKPAVT--KAQSSTAQSRGVLRRMTVAALTATG----
Mb2534|M.bovis_AF2122/97            MKAADS---KPARTVRARAVLRAMTVAALSAADRCL-
Rv2506|M.tuberculosis_H37Rv         MKAADS---KPARTVRARAVLRAMTVAALSAADRCL-
MAV_1669|M.avium_104                MKSQDSGRGKPARAARSRAIMRAMTVAALAAGNQCP-
MMAR_3853|M.marinum_M               MKSADT---KSACAPHSRAVMRAMTVAALTVDVGA--
MUL_3785|M.ulcerans_Agy99           MESADT---KSACAPHSRAVMRAMTVAALTVDVGA--
MAB_4541|M.abscessus_ATCC_1997      AGRSAP--------SQTRTVLRQMVVAALRS------
TH_2855|M.thermoresistible__bu      FHPDRG-----HSLPDVIAAYTEMIVERVLRARIS--
MLBr_01070|M.leprae_Br4923          ATFSDE-----KPLIPDKKVIDTLVHIWLASIYGS--
                                                           :    :