For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TNDIRPVCVVGGGRMGAGISQVFALAGFTVFVYEVNEQVRTSVVDRVRESLACAELDVAVADRIIITDDL SAAVADACFVTEAVGEKLELKREVLAGIAAAAPHDAILASNTSVIPISEIAAGSPAIDRIVGTHWWNPAP LIPLVEVVQATGTSVETVSRTMKLLAAIGKKPMHVRKEVPGFVGNRLQHALWREAIALVQEGVCDATTVD DVVKNSFGLRLAVLGPLENADLVGLDLTLDIHRVVVPALDCQGGPNPVLVDKVARGMLGCKTGEGFRRWS PADIAEMNNRLEGHLVRLLHPRNTGPVG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4489c | - | - | 100% (309) | 3-hydroxyacyl-CoA dehydrogenase family protein |
M. abscessus ATCC 19977 | MAB_0904 | - | 3e-44 | 40.21% (281) | putative 3-hydroxyacyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_4094c | - | 4e-32 | 36.11% (288) | 3-hydroxybutyryl-CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1742 | fadB3a | 7e-34 | 42.62% (183) | 3-hydroxybutyrul-CoA dehydrogenase |
M. gilvum PYR-GCK | Mflv_0106 | - | 6e-32 | 34.86% (284) | 3-hydroxybutyryl-CoA dehydrogenase |
M. tuberculosis H37Rv | Rv1715 | fadB3 | 6e-68 | 46.80% (297) | 3-hydroxybutyryl-CoA dehydrogenase FADB3 |
M. leprae Br4923 | MLBr_02461 | fadB2 | 6e-32 | 34.98% (283) | 3-hydroxybutyryl-CoA dehydrogenase |
M. marinum M | MMAR_0793 | fadB2 | 1e-32 | 36.62% (284) | 3-hydroxybutyryl-CoA dehydrogenase FadB2 |
M. avium 104 | MAV_4681 | - | 5e-31 | 35.69% (283) | 3-hydroxybutyryl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_6791 | - | 8e-42 | 34.07% (317) | 3-hydroxybutyryl-CoA dehydrogenase |
M. thermoresistible (build 8) | TH_3443 | - | 3e-27 | 34.51% (255) | PUTATIVE 3-hydroxybutyryl-CoA dehydrogenase FadB2 |
M. ulcerans Agy99 | MUL_4537 | fadB2 | 2e-32 | 36.27% (284) | 3-hydroxybutyryl-CoA dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_0802 | - | 3e-32 | 35.56% (284) | 3-hydroxybutyryl-CoA dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0793|M.marinum_M -----MG----SDAAIQRVGVVGAGQMGSGIAEVSVRAGVEVTVFETTEA MUL_4537|M.ulcerans_Agy99 -----MG----SDAAIQRVGVVGAGQMGSGIAEVSVRAGVEVTAFETTEA MAV_4681|M.avium_104 MHDKTIGGETVSDAAIQRVGVVGAGQMGSGIAEVSVRADVDVTVFETTEA MLBr_02461|M.leprae_Br4923 ----------MSDAAIQRVGVVGAGQMGSGIAEVAVRAGVGVTVFETTDT TH_3443|M.thermoresistible__bu ------------------------------LRWWHARERCPX-VYDISEE Mflv_0106|M.gilvum_PYR-GCK -------------MSIERVGVVGAGQMGSGIAEVAAKAGANVVVYEPSDA Mvan_0802|M.vanbaalenii_PYR-1 -------------MSIERVGVVGAGQMGSGIAEVAAKAGANVVVYEPSEA Mb1742|M.bovis_AF2122/97 ---------MLTSHGFSRAAVVGAGLMGRRIAGVLASAGLDVAITDTNAE Rv1715|M.tuberculosis_H37Rv ---------MLTSHGFSRAAVVGAGLMGRRIAGVLASAGLDVAITDTNAE MAB_4489c|M.abscessus_ATCC_199 -----------MTNDIRPVCVVGGGRMGAGISQVFALAGFTVFVYEVNEQ MSMEG_6791|M.smegmatis_MC2_155 ------------MRKINTVTVVGAGYMGGGIAQVLALNGFKVQIADVNAE : . : . MMAR_0793|M.marinum_M LITAGRNRIVKSLERGVSSGKVTERERDRALSR--LTFTTDLNDLADRQL MUL_4537|M.ulcerans_Agy99 LITAGRNRIVKSLERGVSSGKVTERERDRALSR--LTFTTDLNDLADRQL MAV_4681|M.avium_104 LITAGRNRIVKSLERGVSAGKVTERERDRALSK--LTFTTDLKDLADRQL MLBr_02461|M.leprae_Br4923 LVTAGRNRIVKSLERGVSAGKVTERERDSALGH--LVFTTDLNDLADRQL TH_3443|M.thermoresistible__bu LTTAGRERIAKSLTRGVQAGKLSEDERSAALDR--LRFTTTLADLSDRQL Mflv_0106|M.gilvum_PYR-GCK LVNAGRERITASLERAKAKGKLAADDFEITLAR--LTFTTDLADLADRQL Mvan_0802|M.vanbaalenii_PYR-1 LVAAGRDRITASLERAKAKGKLAADDFDATVAR--LTFTTNLGDLADRQL Mb1742|M.bovis_AF2122/97 ILHAAAVEAARVA---------GAGRGSVAAAA------DLAAAIPDADL Rv1715|M.tuberculosis_H37Rv ILHAAAVEAARVA---------GAGRGSVAAAA------DLAAAIPDADL MAB_4489c|M.abscessus_ATCC_199 VRTSVVDRVRESL---------ACAELDVAVADRIIITDDLSAAVADACF MSMEG_6791|M.smegmatis_MC2_155 ATQEALKRLDREAREFEQQGLFGPGSADTIMSN-LTASDSLDDAVSDVDY . . :.* MMAR_0793|M.marinum_M VIEAIIEDEAVKTKVFADLDRVVTDPDAVLASNTSSIPIMKVAAATKNPR MUL_4537|M.ulcerans_Agy99 VIEAIIEDEAVKTKVFADLDRVVTDPDAVLASNTSSIPIMKVAAATKNPR MAV_4681|M.avium_104 VIEAIIEDDAVKAQVFAELDRVVTDPDAVLASNTSSIPIMKLAAATKNPQ MLBr_02461|M.leprae_Br4923 VIEAIVEDEAVKTKVFAELDRVITDPDAVLASNTSSIPIMKIAAATKNPQ TH_3443|M.thermoresistible__bu VIEAIVEDENVKATVFAELDELLTDPDAVLASNTSSIPIMKLAAATKNPG Mflv_0106|M.gilvum_PYR-GCK VIEAIIEDEAVKAKVFAQLDEVVTDPDAVLASNTSSIPIMKIAAATKNPS Mvan_0802|M.vanbaalenii_PYR-1 VIEAIVENEAVKAKVFAELDAVVTDPDAVLASNTSSIPIMKIAAATKNPS Mb1742|M.bovis_AF2122/97 VIEAVVENLAVKQELFERLATLAP--DAVLATNTSVLPIGAVTERVEDGS Rv1715|M.tuberculosis_H37Rv VIEAVVENLAVKQELFERLATLAP--DAVLATNTSVLPIGAVTERVEDGS MAB_4489c|M.abscessus_ATCC_199 VTEAVGEKLELKREVLAGIAAAAPH-DAILASNTSVIPISEIAAGSPAID MSMEG_6791|M.smegmatis_MC2_155 VMEAVFEDVDVKKEVLARVCASARP-DTIIGTNTSTIPVKVLVDAVTHPE * **: *. :* :: : *:::.:*** :*: :. MMAR_0793|M.marinum_M RVLGLHFFNPVPVLPLVELVSTLVTDEAAVARTEEFASAVLGKQVVRCSD MUL_4537|M.ulcerans_Agy99 RVLGLHFFNPVPVLPLVELVNTLVTDEAAVARTEEFASAVLGKQVVRCSD MAV_4681|M.avium_104 RVLGLHFFNPVPVLPLVELVSTLVTDEAAAARTEEFASAVLGKQVVRCSD MLBr_02461|M.leprae_Br4923 RVLGLHFFNPVPVLPLVELVSTLVTDEAAATRAEEFASGVLGKQVVRCSD TH_3443|M.thermoresistible__bu RVLGLHFFNPVPVLPLVELINTLVTTDEAIARTEKFAAEVLGKQVVRCGD Mflv_0106|M.gilvum_PYR-GCK RVLGLHFFNPVPVLPLVEVINTLVTSEEAVARVEQFASEVLGKKVVRCGD Mvan_0802|M.vanbaalenii_PYR-1 RVLGLHFFNPVPVLPLVELVNTLVTSDDAIARVERFAGEVLGKKVVRCGD Mb1742|M.bovis_AF2122/97 RVIGTHFWNPPDLIPVVEVVPSARTAPDTADRVVALLTQVGKLPVRVGRD Rv1715|M.tuberculosis_H37Rv RVIGTHFWNPPDLIPVVEVVPSARTAPDTADRVVALLTQVGKLPVRVGRD MAB_4489c|M.abscessus_ATCC_199 RIVGTHWWNPAPLIPLVEVVQATGTSVETVSRTMKLLAAIGKKPMHVRKE MSMEG_6791|M.smegmatis_MC2_155 RFLTVHFSNPAPFIPGVELVAGEATTQEVIDSVKDLLARAGREGAQVA-D *.: *: ** .:* **:: * . . : : MMAR_0793|M.marinum_M RSGFVVNALLVPYLLSAIRMVEAGFATVEDVDKAVVAGLSHPMG---PLR MUL_4537|M.ulcerans_Agy99 RSGFVVNALLVPYLLSAIRMVEAGFATVEDVDKAVVAGLSHPMG---PLR MAV_4681|M.avium_104 RSGFVVNALLVPYLLSAIRMVEAGFATVEDVDKAVVAGLSHPMG---PLR MLBr_02461|M.leprae_Br4923 RSGFVVNALLVPYLLSAIRIVEAGFATVEDVDKAVLAGLSHPMG---PLR TH_3443|M.thermoresistible__bu RSGFVVNALLVPYLLSAIRMVESGYASVEDVDKAVVAGLSHPMG---PLR Mflv_0106|M.gilvum_PYR-GCK RSGFIVNALLVPYLLSAIRMAEAGVATVEDIDTAVVAGLSHPMG---PLR Mvan_0802|M.vanbaalenii_PYR-1 RSGFVVNALLVPYLLSAIRMAEAGVATVEDIDTAVVAGLSHPMG---PLR Mb1742|M.bovis_AF2122/97 VPGFIGNRLQHAL------------------------------------- Rv1715|M.tuberculosis_H37Rv VPGFIGNRLQHALWREAIALVAEGVCDPKTVDLVVRNTIGLRLATLGPLE MAB_4489c|M.abscessus_ATCC_199 VPGFVGNRLQHALWREAIALVQEGVCDATTVDDVVKNSFGLRLAVLGPLE MSMEG_6791|M.smegmatis_MC2_155 TPGMALNRLQYALLKEATLIVEEGVATKEDVDTIVRTTFGFRLGFFGPFA .*: * * . MMAR_0793|M.marinum_M LSDLVGLDTLKLIADKMFEEFKEPHYGPPPLLLRMVEAGQLGKKSGQGFY MUL_4537|M.ulcerans_Agy99 LSDLVGLDTLKLIADKMFEEFKEPHYGPPPLLLRMVEAGQLGKKSGQGFY MAV_4681|M.avium_104 LSDLVGLDTLKLIADKMFEEFKEPQYGAPPLLLRMVEAGRLGKKTGQGFY MLBr_02461|M.leprae_Br4923 LSDLVGLDTLKLIADKMFEEFKEPHYGPPPLLLRMVEAGLLGKKSGQGFY TH_3443|M.thermoresistible__bu LSDLVGLDTLKLIADKMFDEFKEPHYGPPPLLVRMVEAGHLGKKTGRGFY Mflv_0106|M.gilvum_PYR-GCK LSDLIGLDTMKLIADSMYDEYKDPNFAPPPLLQRMVEAGQLGKKSGKGFY Mvan_0802|M.vanbaalenii_PYR-1 LSDLIGLDTMKLIADSMYDEYKDPHYAPPPLLQRMVEAGQLGKKSGKGFY Mb1742|M.bovis_AF2122/97 -------------------------------------------------- Rv1715|M.tuberculosis_H37Rv NADYIGLDLTLAIHDAVIPSLN-HDPHPSPLLRELVAAGQLGARTGHGFL MAB_4489c|M.abscessus_ATCC_199 NADLVGLDLTLDIHRVVVPALD-CQGGPNPVLVDKVARGMLGCKTGEGFR MSMEG_6791|M.smegmatis_MC2_155 IADQAGLDVYVKGYHTLENAFG-ERMATPKLLTDNVDAGRYGTKNGKGWT MMAR_0793|M.marinum_M TY---------------------------------- MUL_4537|M.ulcerans_Agy99 TY---------------------------------- MAV_4681|M.avium_104 TY---------------------------------- MLBr_02461|M.leprae_Br4923 TY---------------------------------- TH_3443|M.thermoresistible__bu TY---------------------------------- Mflv_0106|M.gilvum_PYR-GCK SY---------------------------------- Mvan_0802|M.vanbaalenii_PYR-1 TY---------------------------------- Mb1742|M.bovis_AF2122/97 ------------------------------------ Rv1715|M.tuberculosis_H37Rv ----DWPAGAREATTARLAQHIAAQLQANEKGRGT- MAB_4489c|M.abscessus_ATCC_199 ----RWSPADIAEMNNRLEGHLVRLLHPRNTGPVG- MSMEG_6791|M.smegmatis_MC2_155 GDFDDETKAAVIAYRNKAYSRMGELLRELGPAPKGA