For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_4411c (-)

annotation: GntR family transcriptional regulator
coordinates: 4489854 - 4490540
length: 228

TTLVPEEFAPLERQSTAELIAERLRIAIMRGVLAPGAQLGEASLAAQFAVSRGPLREAMQRLVSEGLLRS
ERNRGIFVIELTDDDVLDVYRSRSAIERAALECIMTGDTVTAYRRLLVPVAVMTEAAARGDVVAVTDADQ
DFHEVLVDCSGSPRLRRAMRTLLLETRMLLGELQGAYPDLSEQVREHEVLCAAIGAGDAPAAYRLIDEHM
HDAVTRLMARRDPGSVE*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_4411c--100% (228)GntR family transcriptional regulator
M. abscessus ATCC 19977MAB_0068-8e-1731.31% (198) GntR family transcriptional regulator
M. abscessus ATCC 19977MAB_1705c-9e-1330.35% (201) GntR family transcriptional regulator

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0170c-2e-1127.57% (214) GntR family transcriptional regulator
M. gilvum PYR-GCKMflv_0958-7e-1729.63% (216) GntR family transcriptional regulator
M. tuberculosis H37RvRv0165c-4e-1029.08% (141) GntR family transcriptional regulator
M. leprae Br4923-----
M. marinum MMMAR_2244-3e-2029.49% (217) GntR family transcriptional regulator
M. avium 104MAV_5020-9e-1629.73% (222) transcriptional regulator, GntR family protein
M. smegmatis MC2 155MSMEG_2489-9e-4247.85% (209) transcriptional regulator, GntR family protein, putative
M. thermoresistible (build 8)TH_0156-3e-1328.37% (215) POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY
M. ulcerans Agy99MUL_1833-7e-2029.03% (217) GntR family transcriptional regulator
M. vanbaalenii PYR-1Mvan_3051-1e-2032.08% (212) GntR family transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


MAB_4411c|M.abscessus_ATCC_199      --------------------------------------MTTLVPEEFAPL
MSMEG_2489|M.smegmatis_MC2_155      --------------------------------------MTSYL----EPL
MMAR_2244|M.marinum_M               ----------------------------------MLEEEAVVIPRADSPD
MUL_1833|M.ulcerans_Agy99           ----------------------------------MLEEEAVVIPRADSPD
Mb0170c|M.bovis_AF2122/97           MIKHDVVWVTLWPERPNNKPPPSPRQVPGNPGPTLKVLASHVNAPLSAKP
Rv0165c|M.tuberculosis_H37Rv        MIKHDVVWVTLWPERPNNKPPPSPRQVPGNPGPTLKVLASHVNAPLSAKP
MAV_5020|M.avium_104                ---------------------------------------------MSMQP
TH_0156|M.thermoresistible__bu      -----------------------------------------MNAPITSRL
Mflv_0958|M.gilvum_PYR-GCK          --------------------------------------MADAQLQLAALP
Mvan_3051|M.vanbaalenii_PYR-1       ---------------------------------------------MAAPT
                                                                                      

MAB_4411c|M.abscessus_ATCC_199      ERQ-------STAELIAERLRIAIMRGVLAPGAQLGEASLAAQFAVSRGP
MSMEG_2489|M.smegmatis_MC2_155      EQQ-------STPSLIADKLRQAIGAREFKPGQQLSEAALAQKLGVSRGP
MMAR_2244|M.marinum_M               QTCGRLPARGTIGEQVADLIQESILSGEAKRGAPLREELIADRYQVSRRT
MUL_1833|M.ulcerans_Agy99           QTCGRLPARGTVGEQVADLIQESILSGEAKRGSPLREELIADRYQVSRRT
Mb0170c|M.bovis_AF2122/97           RSQLP-LRRAQLSDEVAGHLRAAIMSGALRSGTFIRLDETAAELGVSVTP
Rv0165c|M.tuberculosis_H37Rv        RSQLP-LRRAQLSDEVAGHLRAAIMSGALRSGTFIRLDETAAELGVSVTP
MAV_5020|M.avium_104                RSRRP-LRRAQLSDEVAGHLRAAIMSGALRPGTFIRLDETAAELGVSVTP
TH_0156|M.thermoresistible__bu      GPNGGGRRRDQLSDEVAAQLRAEIMSGALRPGTYIRLDETAARLGVSITP
Mflv_0958|M.gilvum_PYR-GCK          AAEGR------RAEQVMAAVRAALDAGVMRPGVKYSVYQLADALQVSRTP
Mvan_3051|M.vanbaalenii_PYR-1       EEPSRLALPATLVEVAGNRLRDAILSGELAPGEKIIEEQLCADFGISRAP
                                                 .     ::  :       *        .    :*  .

MAB_4411c|M.abscessus_ATCC_199      LREAMQRLVSEGLLRSERNRGIFVIELTDDDVLDVYRSRSAIERAALECI
MSMEG_2489|M.smegmatis_MC2_155      LREGMQRLTQEGLLVSIRHRGLFVIEMTPDEVCDMYLAREAIERAAAAKI
MMAR_2244|M.marinum_M               VRDALRVLESNGLVRHQRHKGSTVVDFSAEDITDMYRSREVLELDAAKRW
MUL_1833|M.ulcerans_Agy99           VRDALRVLESNGLVRHQRHKGSTVVDFSAGDITDMYRSREVLELDAAKRW
Mb0170c|M.bovis_AF2122/97           VREALLKLRGEGMVGLEPHRGHVVLPLTRQDIDDIFWLQATIAQELATSA
Rv0165c|M.tuberculosis_H37Rv        VREALLKLRGEGMVGLEPHRGHVVLPLTRQDIDDIFWLQATIAQELATSA
MAV_5020|M.avium_104                VREALLKLRGEGMVQLEPHRGHVVLPLTRQDIEDIFWLQATIAKELAAAA
TH_0156|M.thermoresistible__bu      IREALRTLRGEGMVQLEPHRGHVVAPLTRGDIEDIFWLQATIARKLTAAA
Mflv_0958|M.gilvum_PYR-GCK          VRDALLRLEEIGLIRFEARQGFRILLPDPREIADIVAIRFALEPPAAGRA
Mvan_3051|M.vanbaalenii_PYR-1       LREALRRLAQQGLVEHLPRRGSRVTEWSPTDILQLFELRNVLERHAIESA
                                    :*:.:  *   *::    .:*  :      :: ::   : .:        

MAB_4411c|M.abscessus_ATCC_199      MTGDTVTAY---RRLLVPVAVMTEAAARGDVVAVTDADQDFHEVLVDCSG
MSMEG_2489|M.smegmatis_MC2_155      LRGDHVAAG---DALLEIVEQMTKARTP---AENSEVDIRFHIRLVELSD
MMAR_2244|M.marinum_M               CRAGEVDSGYRFHRLTEALGRLEQASRGTDSGLIVKSDLDFHAAIIGLLD
MUL_1833|M.ulcerans_Agy99           CRAGEVDSGYRFHRLTEALGRLEQASRGTDSGLIVKSDLDFHAAIIGLLD
Mb0170c|M.bovis_AF2122/97           TAHITDVEI---DELDRINNALAGAIGSGDAKTIASIEFAFHRVFNKASR
Rv0165c|M.tuberculosis_H37Rv        TAHITDVEI---DELDRINNALAGAIGSGDAKTIASIEFAFHRVFNKASR
MAV_5020|M.avium_104                TDHITDTEI---DELDRINDALAAAVGSGDAETIAGLEFGFHRVFNQASG
TH_0156|M.thermoresistible__bu      VDRITDAEL---DELTALNEALAAAVDRGVVGEVAAAMSAFHRVLHRTTG
Mflv_0958|M.gilvum_PYR-GCK          AAVCGPPLA---DRLAERMELLRRAAARGDEPGFAAHDLLLHDHILEAAG
Mvan_3051|M.vanbaalenii_PYR-1       LPLADLDRD-----LEPVRAALEQMDASSDVLSLDDAHRAFHAAVVGLAK
                                                  *      :                  :*  .     

MAB_4411c|M.abscessus_ATCC_199      SPRLRRAMRTLLLETRMLLGELQGA----YPDLSEQVREHEVLCAAIGAG
MSMEG_2489|M.smegmatis_MC2_155      SPRLSRMHQTFITETQMCIHALDES----YSVSDFRSEEHRAIAAAIKAG
MMAR_2244|M.marinum_M               SPRVDRFFAAIEAEMLYALAILEASEGEYKTDAAKAFGEHKAMYEALRDR
MUL_1833|M.ulcerans_Agy99           SPRVDRFFAAIEAEMLYALAILEASEGEYKTDAAKAFGEHKAMYEALRDR
Mb0170c|M.bovis_AF2122/97           RIKLAWFLLNAARYMPAQVFAADPR------WGADAVNSHRQLIAALRRR
Rv0165c|M.tuberculosis_H37Rv        RIKLAWFLLNAARYMGAGVRGRP----------AMGRGRGEQSSAADRR-
MAV_5020|M.avium_104                RIKLAWFLLNAARYMPVLVYAADPQ------WGRAAVDNHRQLIAALRRR
TH_0156|M.thermoresistible__bu      RIKLAWFLYHVARYMPPQIYATDQQ------WGTATVARHRELIAALRRR
Mflv_0958|M.gilvum_PYR-GCK          NNRARRIVRSLRESTRLLGGITADR----SRTMSDIDAEHQPVVDAVIAN
Mvan_3051|M.vanbaalenii_PYR-1       NRQLDIALEPILLKLQLPMARNMREEAR---QHAGPGRRHRPGAADEGIG
                                      :                                     .         

MAB_4411c|M.abscessus_ATCC_199      DAPAAYRLIDEHMHDAVTRLMARRDPGSVE-------------------
MSMEG_2489|M.smegmatis_MC2_155      DRELTDELLIAHMDDALNRLIPPDGNGNGDGSGKGKGKRKGNSDGGGKG
MMAR_2244|M.marinum_M               DEQRSTQLISEHLRINRDVLIRIVAS-----------------------
MUL_1833|M.ulcerans_Agy99           DEQRSTQLISEHLRINRDVLIRIVAS-----------------------
Mb0170c|M.bovis_AF2122/97           DTAAVIEHTVWQFTDGARRLTEALAETEVFG------------------
Rv0165c|M.tuberculosis_H37Rv        --AAPPRHSRR---NRAHRLAVHRWGTQADGGPG---------------
MAV_5020|M.avium_104                DTAAVIEHTVWQFTDAAARLTAMRDRTGTPSNRG---------------
TH_0156|M.thermoresistible__bu      DTETATRVTVDLFTDSAQRLIAQLEKVGIWT------------------
Mflv_0958|M.gilvum_PYR-GCK          DPAAAAAAMRTHLTSTGRLLVAQAVRDQDSPLDAAAVWAEAVGANTELP
Mvan_3051|M.vanbaalenii_PYR-1       RHKAILSALETNDPAAVVTAIRDHGHLHYLGLAP---------------