For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ADGRGWFPGQGGWQENEGPEDLAALRRTNRMIDAIAADLPVATSDSDEYAVAMMLAAWREDVGREPMPAK PTLGQARNALRDRGGRSRMLATTVGSAAAVTLLFGGFGAAVYQSHPGDALYGLRTSLFGAPPAVRTDPVV LSAQTELAQVEKLISQGDWEEAQQQLGVAAARVNEVGDAQQKAELASRVQQAEVRIDAKDPQATVPPEMV TETPRIMLSPPSIAPITSTTTTSTTSTTSASTTTSDSTSASTSTTETSGSASPSTSSSTSTSATASTSVT SVPTSTPTTVTITTTPPSSAATITSTPASATETTTAPSVSTAPTTSVPGVTASTTVPPTASIVTVPTTPE GVTIVTTRPGVVNTPVITAPTTIEAPVPITRTPDNPAPAYQAPVNSPGSGNLHGYPGSGGNAGSGSDGPS RHMPAMTSVPVAPANPGSGSANQGSGSGSHTDE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3723c | - | - | 100% (454) | hypothetical protein MAB_3723c |
M. abscessus ATCC 19977 | MAB_2960 | - | 7e-16 | 27.63% (228) | hypothetical protein MAB_2960 |
M. abscessus ATCC 19977 | MAB_1026c | - | 3e-10 | 31.21% (157) | hypothetical protein MAB_1026c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3447c | - | 1e-31 | 31.25% (288) | hypothetical protein Mb3447c |
M. gilvum PYR-GCK | Mflv_4911 | - | 2e-62 | 38.74% (382) | hypothetical protein Mflv_4911 |
M. tuberculosis H37Rv | Rv3413c | - | 1e-31 | 31.25% (288) | hypothetical protein Rv3413c |
M. leprae Br4923 | MLBr_00877 | mmpS3 | 4e-07 | 36.00% (100) | hypothetical protein MLBr_00877 |
M. marinum M | MMAR_1135 | - | 2e-36 | 31.02% (303) | hypothetical protein MMAR_1135 |
M. avium 104 | MAV_4358 | - | 2e-27 | 31.93% (238) | hypothetical protein MAV_4358 |
M. smegmatis MC2 155 | MSMEG_1600 | - | 1e-56 | 36.88% (442) | hypothetical protein MSMEG_1600 |
M. thermoresistible (build 8) | TH_3373 | - | 5e-53 | 38.29% (410) | PUTATIVE hypothetical protein Mjls_1192 |
M. ulcerans Agy99 | MUL_0898 | - | 8e-38 | 29.88% (338) | hypothetical protein MUL_0898 |
M. vanbaalenii PYR-1 | Mvan_1509 | - | 2e-64 | 41.34% (387) | hypothetical protein Mvan_1509 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4911|M.gilvum_PYR-GCK -------MPDFGRRD-----PGGGDPSLTDINRTDQFLDALAAQQQPF-- Mvan_1509|M.vanbaalenii_PYR-1 -------MPDHGRWN-----SGG-DPSLNEINRTDQFLDALASQQPVY-- MSMEG_1600|M.smegmatis_MC2_155 -------MPDFGRWT-----SNGGDPSLNEINRTDRFIEALSLEQPVY-- TH_3373|M.thermoresistible__bu -------MADFGRWNPNWNPDDGGQPSLQDIHRSEQFIEALSTGRPVY-- Mb3447c|M.bovis_AF2122/97 -------MREFGNPL-------GDRPPLDELARTDLLLDALAEREEVD-- Rv3413c|M.tuberculosis_H37Rv -------MREFGNPL-------GDRPPLDELARTDLLLDALAEREEVD-- MMAR_1135|M.marinum_M -------MPESGFAL-------GDQPGLDEVARTDLLLDALAGRERFS-- MUL_0898|M.ulcerans_Agy99 -------MPESGFTL-------GDQPGLDEVARTDLLLDALAGRERFS-- MAV_4358|M.avium_104 --------------M-------TVPESLDEFARTDLLLDALAQRRPVPRG MAB_3723c|M.abscessus_ATCC_199 MADGRGWFPGQGGWQ-----ENEGPEDLAALRRTNRMIDAIAADLPVA-- MLBr_00877|M.leprae_Br4923 ---------------------------MSGPNPPGRENEESDSGNELSG- : . : Mflv_4911|M.gilvum_PYR-GCK -VTDRDD---VELAQLLAGWRDDIRETPMGHVVTPLQAEAALDRVTRPAA Mvan_1509|M.vanbaalenii_PYR-1 -ATDRGE---AELAHLLAGWRDDVRETPMGHVMTAEDAAIALGRVTKP-- MSMEG_1600|M.smegmatis_MC2_155 -STDPEE---AELAFLLAGWRDDVRQAPMTGIINPREAVVALDRAVAR-- TH_3373|M.thermoresistible__bu -ANDPGE---DELAYLMAGWRDRARNAPMRATITEQDAVAALQRGLPRPR Mb3447c|M.bovis_AF2122/97 -FADPRD---DALAALLGQWRDDLRWPPASALVSQDEAVAALRAGVAQRR Rv3413c|M.tuberculosis_H37Rv -FADPRD---DALAALLGQWRDDLRWPPASALVSQDEAVAALRAGVAQRR MMAR_1135|M.marinum_M -LNDPDD---DALAALMGEWRDDLRWPPASALVSQNEAVDALILGLSERR MUL_0898|M.ulcerans_Agy99 -LNDPDD---DALAALMGEWRDDLRWPPASALVSQNEAVDALILGLSERR MAV_4358|M.avium_104 QVEDPDDPDFQMLTTLLEDWRDNLRWPPASALVTPEEAVNALRAGLAERR MAB_3723c|M.abscessus_ATCC_199 -TSDSDE---YAVAMMLAAWREDVGREPMPAKPTLGQARNALRDRGGRSR MLBr_00877|M.leprae_Br4923 -ELDPHN---------GVESVDELVPVPDSDLVTASDHTSETEVYSQAYS * : : * . : Mflv_4911|M.gilvum_PYR-GCK -----PRRRFSLAVVGSAAAAVLAIGGFGAVVAGSGPGDALYGLRTMLFG Mvan_1509|M.vanbaalenii_PYR-1 -----PRRRLSLAVIGSAAAAVLAIGGVGAVVAGSGPGDALYGLRTMLFG MSMEG_1600|M.smegmatis_MC2_155 -----NRPRLPLALVGSAAAAVLCLGGFGAAVYGSSPGDALYGLRGMIFG TH_3373|M.thermoresistible__bu GGAPRPGRRFSLTVVGSAAAAVICLGGFGALVAGAGPGDPLYGLRTMLFG Mb3447c|M.bovis_AF2122/97 ------RARRSLAAVGSVAAALLVLSGFGAVVADARPGDLLYGLHAMMFN Rv3413c|M.tuberculosis_H37Rv ------RARRSLAAVGSVAAALLVLSGFGAVVADARPGDLLYGLHAMMFN MMAR_1135|M.marinum_M ------RSRRAWAAIGSVAATLLALSGLGAVVADARPGDLLYGLHAMLFN MUL_0898|M.ulcerans_Agy99 ------RSRRAWAAIGSVAATLLALSGLGAVVADARPGDLLYGLHAMLFN MAV_4358|M.avium_104 ------RGHRGLAVVGSVAATLMLLSGFGAMVVEARPGSTLYGLHAMFFD MAB_3723c|M.abscessus_ATCC_199 ---------MLATTVGSAAAVTLLFGGFGAAVYQSHPGDALYGLRTSLFG MLBr_00877|M.leprae_Br4923 ------APEAEHFTAVPYVPADLRLYDYDESSVYDEPGAAPR--WPWVVG . ... : : . . ** ... Mflv_4911|M.gilvum_PYR-GCK EQVQMRDDAVILAAQTEMQQVQQLIEQGDWQQAQAKLEAVTTTVATVDDV Mvan_1509|M.vanbaalenii_PYR-1 EQAQTRDDAVILAAQTEMQQVQQLIEQGDWAGAQAKLEAVTTTVATVADV MSMEG_1600|M.smegmatis_MC2_155 EQATR--DVQVELASTELEQVQQLIEQGDWQAAQQKLQTLTTTVATVNDE TH_3373|M.thermoresistible__bu DVVRD--DPVVLAAQTQLAEVEQLIAQGDWEAAQERLQAVTTTVATVGDE Mb3447c|M.bovis_AF2122/97 RSRVSD-DQIVLSAKANLAKVEQMIAQGQWAEAQDELAEVSSTVQAVTDG Rv3413c|M.tuberculosis_H37Rv RSRVSD-DQIVLSAKANLAKVEQMIAQGQWAEAQDELAEVSSTVQAVTDG MMAR_1135|M.marinum_M EPRVSE-DQIMLSAKADLAKAEQMIAQGQWDQAESQLAEVSSTLQTVNDG MUL_0898|M.ulcerans_Agy99 EPRVSE-DQIMLSAKADLAKAEQMIAQGQWDQAESQLAEVSSTLQTVNDG MAV_4358|M.avium_104 QPRVNEKDQVMLAAKADLAKVAESIDKGQWDQARTQLTEVSSLVASIDDP MAB_3723c|M.abscessus_ATCC_199 APPAVRTDPVVLSAQTELAQVEKLISQGDWEEAQQQLGVAAARVNEVGDA MLBr_00877|M.leprae_Br4923 -------VAAILAAISLVVSVSLLFTR----TDTSKLSTPTTGRSTPPVQ : * : : .. : : .* :: Mflv_4911|M.gilvum_PYR-GCK AQKEELIAQWQELTVKVEAQDPVATVPPGAPLPTFPELPAAVLDQATTSS Mvan_1509|M.vanbaalenii_PYR-1 ERKQELVTQWQELTVKVEAQDPVATVPPGSPLPTFPDVPVAVLDPGTSSE MSMEG_1600|M.smegmatis_MC2_155 AQKQQLVTQWQQLSVKVENQDPNATVAPDAPPPVFPEVTITPPAPTDTSA TH_3373|M.thermoresistible__bu TRKQELVAEWQELSVKVESRNPDATVPPDAPPVTLPVIDPATSTEPTEPG Mb3447c|M.bovis_AF2122/97 SRRQDLINEVNLLNTKVETRDPNATLRPGSPSNPAAPGSVG------NSW Rv3413c|M.tuberculosis_H37Rv SRRQDLINEVNLLNTKVETRDPNATLRPGSPSNPAAPGSVG------NSW MMAR_1135|M.marinum_M SRRQHLLNELNQLNTKVEKRDPNATLPAGGPPQSGPTGVLAPQVPPGNSL MUL_0898|M.ulcerans_Agy99 SRRQHLLNELNQLNTKVEKRDPNATLPAGGPPQSGPTGVLAPQVPPGNSL MAV_4358|M.avium_104 ATKQDLMTQLNLLNAKVDTRNPNATLPAAAPS------------------ MAB_3723c|M.abscessus_ATCC_199 QQKAELASRVQQAEVRIDAKDPQATVPPEMVTETPRIMLSPPSIAPITST MLBr_00877|M.leprae_Br4923 DEITTVKPPPPSTETSTATETQTVTVTPLPPPS--------------ATS : . . .*: . Mflv_4911|M.gilvum_PYR-GCK ETTAGTTSDTTAPSSE----TTAPSSETTGPSSETTTAPSETTGPAPTTT Mvan_1509|M.vanbaalenii_PYR-1 TTSTAPSSETTSPTS-----PSETTSPTSPSETTSPTSPSETTSPAPSSE MSMEG_1600|M.smegmatis_MC2_155 VETTPGSATPSEPTSPGESATPSDTSDTSEPSSETTVPSSPTPSTAPSSS TH_3373|M.thermoresistible__bu TPSTEP-AEPGEPTEPGDPDMPVDGTEPTSPGTEPTAGPDQPTVPPTVGP Mb3447c|M.bovis_AF2122/97 TPLAPVVEPPTPP-------------------TPASAAEPSMSAGVSESP Rv3413c|M.tuberculosis_H37Rv TPLAPVVEPPTPP-------------------TPASAAEPSMSAGVSESP MMAR_1135|M.marinum_M TPLVPETVSPVPPNESG-----------APESAPAPSASPTTTGAKPSAS MUL_0898|M.ulcerans_Agy99 TPLAPETVSPVPPNESG-----------APESAPAPSASPTTTGAKPSAS MAV_4358|M.avium_104 --MAPSVAVPAAP-------------------PPAASIAP--TPAAPPAP MAB_3723c|M.abscessus_ATCC_199 TTTSTTSTTSASTTTSDSTSASTSTTETSGSASPSTSSSTSTSATASTSV MLBr_00877|M.leprae_Br4923 TAVPPSSVVPPPP------------------TTPTTTVTTLTGPRQVTYS . . . .. Mflv_4911|M.gilvum_PYR-GCK APTSAPTTTA--PAPSTTP-TTSVGQTR---SSAAPSTPPSSAP--TSTT Mvan_1509|M.vanbaalenii_PYR-1 TTSAPTSSPS--PTPSTAPTTTSVGAAPP--SSSAPATTTPTST--TATR MSMEG_1600|M.smegmatis_MC2_155 VPTATSQTPTSTQVPTSTPTSSAAVQLPSPVEEEEPAEPQPTSVPQAPTS TH_3373|M.thermoresistible__bu TSEPATSEPAMTAPTTTVPTSAPGSAVRTTTSAPTTATTTSGSTTAGPTA Mb3447c|M.bovis_AF2122/97 MPNSTSTVAASPSTPSSKP----------------------------EPG Rv3413c|M.tuberculosis_H37Rv MPNSTSTVAASPSTPSSKP----------------------------EPG MMAR_1135|M.marinum_M LPPAGATATSPAPTSVPTP----------------------------PVS MUL_0898|M.ulcerans_Agy99 LPPAGATATSPAPTSVPTP----------------------------PVS MAV_4358|M.avium_104 LSP------APVSTPSPSP----------------------------SVG MAB_3723c|M.abscessus_ATCC_199 TSVPTSTPTTVTITTTPPSSAATITSTPASATETTTAPSVSTAPTTSVPG MLBr_00877|M.leprae_Br4923 VTGTKAPGDIISVTYVDAS---------------------------GRRR . . Mflv_4911|M.gilvum_PYR-GCK VVLQSTTTSAAAPTTSAAP------------------------------- Mvan_1509|M.vanbaalenii_PYR-1 APSATSTTVVQSATTTSAP------------------------------- MSMEG_1600|M.smegmatis_MC2_155 APAVPAEPSGPSGDPARPP------------------------------- TH_3373|M.thermoresistible__bu GGPTSSGPATGPTSVPREPGA----------------------------- Mb3447c|M.bovis_AF2122/97 SIDPSLEPADEATNPAGQP------------------------------- Rv3413c|M.tuberculosis_H37Rv SIDPSLEPADEATNPAGQP------------------------------- MMAR_1135|M.marinum_M AVVPGETPADTSVVAPGSP------------------------------- MUL_0898|M.ulcerans_Agy99 AVVPGETPADTSVVAPGSP------------------------------- MAV_4358|M.avium_104 -----------KHHHHGQP------------------------------- MAB_3723c|M.abscessus_ATCC_199 VTASTTVPPTASIVTVPTTPEGVTIVTTRPGVVNTPVITAPTTIEAPVPI MLBr_00877|M.leprae_Br4923 TQHNVYIPWSMTVTPISQS------------------------------- . Mflv_4911|M.gilvum_PYR-GCK ----TTAAPTTAAPTTAVPTTPSAVETTPAVEEETPPSPVAPVTTTTP-- Mvan_1509|M.vanbaalenii_PYR-1 ----LSTSSSVAAPPTPTPSPSPTPTPAPTVDEESVPSPTAPALPTTTTP MSMEG_1600|M.smegmatis_MC2_155 ----VTATTTVTLPTQAGPAQGPNGRGNGPGNGAKPAEPAQPKAPEQP-A TH_3373|M.thermoresistible__bu ----GAGTTEPTAPAARAGEDGVGGDGTVGGDGAFAEETVGEVPQLTATT Mb3447c|M.bovis_AF2122/97 ------APETPVSPTH---------------------------------- Rv3413c|M.tuberculosis_H37Rv ------APETPVSPTH---------------------------------- MMAR_1135|M.marinum_M ------AAAGVAATGAG--------------------------------- MUL_0898|M.ulcerans_Agy99 ------AAAGVAAPGPAKLAAPGDATNPGSPVVQTSGQPEPVEPAPAGPV MAV_4358|M.avium_104 ------PAVAPVNPNQ---------------------------------- MAB_3723c|M.abscessus_ATCC_199 TRTPDNPAPAYQAPVNSPGSGNLHGYPGSGGNAGSGSDGPSRHMPAMTSV MLBr_00877|M.leprae_Br4923 ------DVGSVEAFSLFRVSKLNCLITTSDGTVLSSNSNDAPQTSC---- Mflv_4911|M.gilvum_PYR-GCK --VLPLPGE--------------- Mvan_1509|M.vanbaalenii_PYR-1 IILLPVPGEAG------------- MSMEG_1600|M.smegmatis_MC2_155 VQIPLLPGMGGN------------ TH_3373|M.thermoresistible__bu TVVLPQSGAADAAGD--------- Mb3447c|M.bovis_AF2122/97 ------------------------ Rv3413c|M.tuberculosis_H37Rv ------------------------ MMAR_1135|M.marinum_M ------------------------ MUL_0898|M.ulcerans_Agy99 S----------------------- MAV_4358|M.avium_104 ------------------------ MAB_3723c|M.abscessus_ATCC_199 PVAPANPGSGSANQGSGSGSHTDE MLBr_00877|M.leprae_Br4923 ------------------------