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VVRAGDRTDEFEALRPRLQAVAYRLTGSVADAEDIVQDAWLRLYSTTAEIEDLAAWLTTVVSRLGLDRLR SAVYRRETYVGEWLPEPVVTGLDGDDPLAALVASEDARFAAMVVLDRLAPDQRVAFVLHDGFSVPFKQIA DILGISDAAARQLASRARRMVTATPEPVADAEHNEVVGELLEALMSGSVEAVVRLLHPDVTMTGDSDGKA PTAVRVIHGPDKVARFLLGLMERYGPQMTQAINPALVNGQFGMYLTETDTDPNFRPVLPRVSAFTVRDGR VLAVWDVSNPDKFSGTPLREA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3678c | - | - | 100% (302) | RNA polymerase sigma factor SigJ |
M. abscessus ATCC 19977 | MAB_1126c | - | 7e-41 | 34.77% (302) | putative sigma factor |
M. abscessus ATCC 19977 | MAB_4200 | - | 3e-37 | 31.42% (296) | putative sigma factor |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3361c | sigJ | 1e-108 | 65.65% (294) | RNA polymerase sigma factor SigJ |
M. gilvum PYR-GCK | Mflv_4852 | - | 1e-105 | 66.78% (298) | RNA polymerase sigma factor SigJ |
M. tuberculosis H37Rv | Rv3328c | sigJ | 1e-108 | 65.65% (294) | RNA polymerase sigma factor SigJ |
M. leprae Br4923 | MLBr_01076 | sigE | 1e-08 | 28.57% (168) | RNA polymerase sigma factor SigE |
M. marinum M | MMAR_1196 | sigJ | 1e-106 | 63.07% (306) | alternative RNA polymerase sigma factor SigJ |
M. avium 104 | MAV_4301 | - | 1e-110 | 65.10% (298) | RNA polymerase sigma factor SigJ |
M. smegmatis MC2 155 | MSMEG_1666 | - | 1e-112 | 66.33% (300) | RNA polymerase sigma factor SigJ |
M. thermoresistible (build 8) | TH_1142 | - | 7e-41 | 36.03% (297) | RNA polymerase sigma factor, sigma-70 family protein |
M. ulcerans Agy99 | MUL_3630 | - | 2e-45 | 42.86% (294) | alternative RNA polymerase sigma factor SigJ- like |
M. vanbaalenii PYR-1 | Mvan_1575 | - | 1e-101 | 64.75% (295) | RNA polymerase sigma factor SigJ |
CLUSTAL 2.0.9 multiple sequence alignment Mb3361c|M.bovis_AF2122/97 --------------------MEVSEFEALRQHLMSVAYRLTGTVADAEDI Rv3328c|M.tuberculosis_H37Rv --------------------MEVSEFEALRQHLMSVAYRLTGTVADAEDI MAV_4301|M.avium_104 MSLVSLTPGPMAYARFMTSAQQVSEFESLRPHLMSVAYRLTGTVADAEDI MMAR_1196|M.marinum_M --------------MAVLGAQAASTFESLRPHLMSVAYRLTGTVADAEDI Mflv_4852|M.gilvum_PYR-GCK ------MPHGGIYTRRMTASARVAEFEQMRPHLLSVAYRLTGTVADAEDI Mvan_1575|M.vanbaalenii_PYR-1 ----------------MTTSARVGEFEQLRPHLLSVAYRLTGTLADAEDI MSMEG_1666|M.smegmatis_MC2_155 ----------------MTTAARTDQFEALRPHLLAVAYRLTGTYADAEDI MAB_3678c|M.abscessus_ATCC_199 --------------MVVRAGDRTDEFEALRPRLQAVAYRLTGSVADAEDI MUL_3630|M.ulcerans_Agy99 ----------------MTDPALLARFQAARPRLGALAYRMLGSLADAEDV TH_1142|M.thermoresistible__bu --------MTGSGAPSARGDEHAERFTHLRPLLFTIAYEILGSATEADDV MLBr_01076|M.leprae_Br4923 ---------MGDGIGMEREGRWTGNTQCPLRVVPGDESPTLDGRASPEDL : . :..:*: Mb3361c|M.bovis_AF2122/97 VQEAWLRWDSQDT------VIADPRAWLTTVVSRLGLDKLRSAAHRRETY Rv3328c|M.tuberculosis_H37Rv VQEAWLRWDSPDT------VIADPRAWLTTVVSRLGLDKLRSAAHRRETY MAV_4301|M.avium_104 VQDAWLRWHGQDG------AITDLRAWLTTVVSRLGLDRLRSATHRRETY MMAR_1196|M.marinum_M VQEAWLRWDAAPGR----DDVADLRAWLTTVVSRLGLDKLRSAARRRETY Mflv_4852|M.gilvum_PYR-GCK VQDAWLRWSTHRG-----AAVEDLKAWLTTVVSRLALDKLRSAAHRRETY Mvan_1575|M.vanbaalenii_PYR-1 VQDAWLRWEANSA-----TVIEDLKAWLTTVVSRLALDRLRSAAHRRETY MSMEG_1666|M.smegmatis_MC2_155 VQEAWIRWAGQEA------PIENLQAWLTTVVSRLGLDRLRSAAHRRESY MAB_3678c|M.abscessus_ATCC_199 VQDAWLRLYSTTA------EIEDLAAWLTTVVSRLGLDRLRSAVYRRETY MUL_3630|M.ulcerans_Agy99 VQEAWLRLNATTDRPEGAQELVNLDAWLTTVVARLCLNLLRDRRGRGREE TH_1142|M.thermoresistible__bu LQESYLRWAEVDLA-----AVRDTKSYLAKLVSRQALNALRAGARRREDY MLBr_01076|M.leprae_Br4923 IITNLLSPTIMSHP-----PPSRDDDWVEPFDALQGTAVFDATGDKATMP : : :: . : : : Mb3361c|M.bovis_AF2122/97 TGTWLPEPVVTGLD---ATDPLAAVVAAEDARFAAMVVLERLRPDQRVAF Rv3328c|M.tuberculosis_H37Rv TGTWLPEPVVTGLD---ATDPLAAVVAAEDARFAAMVVLERLRPDQRVAF MAV_4301|M.avium_104 TGNWLPEPVVTGLGPHSGADPLAAVVAGEDARFAAMVVLERLSPDQRVAF MMAR_1196|M.marinum_M TGHWLPEPVVTGLGDAGGADPLSAVVAAEDARFAVMVVLERLSPDQRVAF Mflv_4852|M.gilvum_PYR-GCK VGEWLPEPVVTGLD---GRDPLSALVADEDARFAAMVVLENLTPDQRVAF Mvan_1575|M.vanbaalenii_PYR-1 VGEWLPEPVVTGFD---GVDPLASVVAGEDARFAAMVVLENLTPDQRVAF MSMEG_1666|M.smegmatis_MC2_155 YGEWLPEPVVTGID---GNDPLNAVVAGEDARFAAMVVLEQLSPDQRVAF MAB_3678c|M.abscessus_ATCC_199 VGEWLPEPVVTGLD---GDDPLAALVASEDARFAAMVVLDRLAPDQRVAF MUL_3630|M.ulcerans_Agy99 LVGQLPDPIVDGVA---AFDPEHHAMLADAVGLALFVVLDTLAPAERLAF TH_1142|M.thermoresistible__bu VGPWLPEPLLLEER-----DASADVVLAESVSMAMMVVLESLTPDERAVF MLBr_01076|M.leprae_Br4923 SWEELVRQHAARVY------WLAYRLSGNQHDAEDLTQETFIRVFRSVQN * : : :. : . Mb3361c|M.bovis_AF2122/97 VLHDGFAVPFAEVAEVLGTSEAAARQLASRARKAVTAQPALISGDPDPAH Rv3328c|M.tuberculosis_H37Rv VLHDGFAVPFAEVAEVLGTSEAAARQLASRARKAVTAQPALISGDPDPAH MAV_4301|M.avium_104 VLHDGFAVPFSEVAEVLGTSEAAARQLASRARKVVSAQP---PPEPDPSH MMAR_1196|M.marinum_M VLHDGFAMPFAEVAGVIGASEAAARQLASRARKAVAAAP---PPQPDPTH Mflv_4852|M.gilvum_PYR-GCK VLHDGFAVPFSAIAEVLGTSTQAARQLASRARRAVSSAP-----PPAADH Mvan_1575|M.vanbaalenii_PYR-1 VLHDGFAVPFAEIAEVLGSSPESARQLASRARRAASAAP-----PPADEH MSMEG_1666|M.smegmatis_MC2_155 VLYDGFGVPFPDIADVLGVSAASARQLASRARRAVADAP---PPVDDNTH MAB_3678c|M.abscessus_ATCC_199 VLHDGFSVPFKQIADILGISDAAARQLASRARRMVTATP---EPVADAEH MUL_3630|M.ulcerans_Agy99 VLHDVFAVPFDQIAPILERTPEATRKLASRARRRIERAEP-FPDRDLCAQ TH_1142|M.thermoresistible__bu VLREVFGFEYGEIATTVGKSVTAVRQIAHRARSHVHARRKRFEPVDPEVS MLBr_01076|M.leprae_Br4923 YQPGTFEGWLHRITTNLFLD-----MVRRRARIRMDALP----------- * :: : : *** Mb3361c|M.bovis_AF2122/97 NEVVGRLMAAMAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKV Rv3328c|M.tuberculosis_H37Rv NEVVGRLMAAMAAGDLDTVVSLLHPDVTFTGDSNGKAPTAVRAVRGSDKV MAV_4301|M.avium_104 DEVVGQLMAAMAAGNLEAVVALLHPDVMFTGDSNGKAPTAVQVIHGADKV MMAR_1196|M.marinum_M NEVVGRLMAAMASGDLHSVVSLLHPDVTFTGDANGRAPTAARVICGADKV Mflv_4852|M.gilvum_PYR-GCK AEVVGKLLAAMASGDLTAVVSLLHPDVTFTGDSNRRAPTAARVIRGSDKV Mvan_1575|M.vanbaalenii_PYR-1 AEVVGKLLAAMASGDLTEVVAVLHPDVTFTGDSNRRAPTAARVIHGSDKV MSMEG_1666|M.smegmatis_MC2_155 NEIAGALMAALAAGDMDGVVRLLHPDVTFTGDSNRKAPTAPRVIHGPEKV MAB_3678c|M.abscessus_ATCC_199 NEVVGELLEALMSGSVEAVVRLLHPDVTMTGDSDGKAPTAVRVIHGPDKV MUL_3630|M.ulcerans_Agy99 REVVDAFFAAGRSGNFERLVSVLHPDVVLRGDFGPNTPRFR--AQGAATV TH_1142|M.thermoresistible__bu MEITERFLTAASTGDMDGLLAMLAPDATWTADGGGKATAARRPIVGAEKV MLBr_01076|M.leprae_Br4923 -DDYDRVPADEPNPEQIYHDSRLGPDLQAALDSLPPEFRAAVVLCDIEGL : . . * ** * . : Mb3361c|M.bovis_AF2122/97 VRFILGLVQRYGP-GLFGANQLALVNGELGAYTAGLPGVDGYRAMAPRIT Rv3328c|M.tuberculosis_H37Rv VRFILGLVQRYGP-GLFGANQLALVNGELGAYTAGLPGVDGYRAMAPRIT MAV_4301|M.avium_104 VRFMLGLARRYGP-GFYSAYQLGLVNGELGIYTAGLPGGDGYREMCPRIM MMAR_1196|M.marinum_M ARFMLGLARRYGP-AFYTANQLALVNGELGSYTLGTAGDGGHWAMLPRIT Mflv_4852|M.gilvum_PYR-GCK ARFLLGLGAKYGPERLLAGSELGLVNGELGVYSPGADATPDAPRIMPRIQ Mvan_1575|M.vanbaalenii_PYR-1 ARFLLGLARRYGEQRFFGSGVLGMVNGELGVYTMGAPATEDAPAIAPRIQ MSMEG_1666|M.smegmatis_MC2_155 ARFLFGLARRYGP-NWLAGAQLALINGELGTYTPGAPAGDGYPELLPRIT MAB_3678c|M.abscessus_ATCC_199 ARFLLGLMERYGP-QMTQAINPALVNGQFGMYLTETDTDPNFRPVLPRVS MUL_3630|M.ulcerans_Agy99 AKLARSYAGPERT------VLNTLVNGAAGAVIS-------ISEQASAVM TH_1142|M.thermoresistible__bu AAVILGIFRAGQR--------LPDVRIETAIYNCAPAVVVYSRDNLEGVF MLBr_01076|M.leprae_Br4923 SYEEIGAT----------------LGVKLGTVRSRIHR--GRQALRDYLL . : . : Mb3361c|M.bovis_AF2122/97 AITVRDGKVCALWDIANPDKFTGSPLKERRAQPTGRGRHHRN Rv3328c|M.tuberculosis_H37Rv AITVRDGKVCALWDIANPDKFTGSPLKERRAQPTGRGRHHRN MAV_4301|M.avium_104 AMTVREGKVCALWDIANPDKFTGSPL--------GR------ MMAR_1196|M.marinum_M AMTVRDGKVCALWDIANPDKFSGSPLRDLVG----------- Mflv_4852|M.gilvum_PYR-GCK ALAVRDGLVVAIYDVANPDKFTASPLAR-------------- Mvan_1575|M.vanbaalenii_PYR-1 ALTVHRGQVVAIYDIANPDKFTASPLR--------------- MSMEG_1666|M.smegmatis_MC2_155 AMTVRDGKVCAVWDVANPDKFTGSPLGTAVRRP--------- MAB_3678c|M.abscessus_ATCC_199 AFTVRDGRVLAVWDVSNPDKFSGTPLREA------------- MUL_3630|M.ulcerans_Agy99 RFLVRNGRIAAIDVLADPQRIATLDISGLSGPGG-------- TH_1142|M.thermoresistible__bu TVEVVDGRITHFYAVRNPEKLAAVDTPRQISR---------- MLBr_01076|M.leprae_Br4923 TAHPRDGATTDATHVKSA------------------------ * : ..