For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NSIWLEGRSGLVARVPLAPDDTTQTVDIAVIGAGITGLTTALLLARAGLEVVVLEARSAGDGTTGNSTGK ISALHGTKLSRIAHRHGHAVARAYTTGNTEGRDWLLRYCEEHGVPTQTEDAYTYAQTREGTAGARDEWNA CLQAGLPVRWETTADTPFPYYGGVRLPDQAQFNPAQLVESMVAQLEDHGAHFFSGMRVRSISGRGPLRIK GDYAHDAGAGEFALEAQRCVLATGTPILDRGGFFAKLTANRSYCMSFDVPGPITRAMYLSVDAPLRSVRY APSSTGDRLVVGGAGHVVGHPAHAREALRELAGWAQTHYPGATRTHSWAAQDYATISELPYAGPLLPGGK RIYLATGYDKWGMTNGIAASLALSSQILGGRMDWANAFASWSALDLRAIPAAIRLGSRVARDFASGWATA MLTSRPEHAPVCTHLGGITTWNDAEDIWECPLHGSCFDSGGSVLWGPATEPLDRLPADGAR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_2503c | - | - | 100% (482) | putative iron-sulfur binding oxidoreductase |
M. abscessus ATCC 19977 | MAB_2283 | - | 2e-07 | 27.05% (207) | putative oxidoreductase |
M. abscessus ATCC 19977 | MAB_2651c | - | 2e-05 | 37.66% (77) | oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3567 | - | 2e-05 | 34.21% (76) | 3-ketosteroid-delta-1-dehydrogenase |
M. gilvum PYR-GCK | Mflv_0732 | - | 1e-144 | 50.69% (505) | FAD dependent oxidoreductase |
M. tuberculosis H37Rv | Rv3537 | - | 2e-05 | 34.21% (76) | 3-ketosteroid-delta-1-dehydrogenase |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_2694 | - | 1e-06 | 33.00% (100) | flavoprotein |
M. avium 104 | MAV_2749 | - | 1e-138 | 49.01% (506) | FAD dependent oxidoreductase domain-containing protein |
M. smegmatis MC2 155 | MSMEG_0637 | - | 1e-146 | 50.59% (508) | iron-sulfur binding oxidoreductase |
M. thermoresistible (build 8) | TH_1303 | - | 1e-140 | 49.60% (504) | iron-sulfur binding oxidoreductase |
M. ulcerans Agy99 | MUL_3063 | - | 3e-07 | 31.67% (120) | flavoprotein |
M. vanbaalenii PYR-1 | Mvan_0117 | - | 1e-145 | 49.90% (505) | FAD dependent oxidoreductase |
CLUSTAL 2.0.9 multiple sequence alignment MAV_2749|M.avium_104 -------------------------------------------------- TH_1303|M.thermoresistible__bu -------------------------------------------------- MSMEG_0637|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0732|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0117|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_2503c|M.abscessus_ATCC_199 -------------------------------------------------- Mb3567|M.bovis_AF2122/97 -------------------------------------------------- Rv3537|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2694|M.marinum_M -------------------------------------------------- MUL_3063|M.ulcerans_Agy99 MNLSVRSPTQIAWVTPDLDATEAAFTGLLGARKWVRIPDVHFAPDSCSYR MAV_2749|M.avium_104 -------------------------------------------------- TH_1303|M.thermoresistible__bu -------------------------------------------------- MSMEG_0637|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_0732|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0117|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_2503c|M.abscessus_ATCC_199 -------------------------------------------------- Mb3567|M.bovis_AF2122/97 -------------------------------------------------- Rv3537|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2694|M.marinum_M -------------------------------------------------- MUL_3063|M.ulcerans_Agy99 GKPADFVASISLSYLGDMQLELISPVRGENIYSDFPRDCGPGLHHICLEV MAV_2749|M.avium_104 -------------------------------------------------- TH_1303|M.thermoresistible__bu -------------------------------------------------- MSMEG_0637|M.smegmatis_MC2_155 ----------------------------------------MSGRSFRFGH Mflv_0732|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_0117|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_2503c|M.abscessus_ATCC_199 -------------------------------------------------- Mb3567|M.bovis_AF2122/97 -------------------------------------------------- Rv3537|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_2694|M.marinum_M -------------------------------------------------- MUL_3063|M.ulcerans_Agy99 EGPEQLEIALAEAADHGASVVQRGSMPGGIQFAYVAAPQAGVPFVEIAYF MAV_2749|M.avium_104 ---------MTSLWMSERTE-RPWAASQLDQGPASADVIVVGAGITGLMT TH_1303|M.thermoresistible__bu ---------MTSLWLADRTN-QPPPPRTLDAGDRRADVVVVGAGITGLIT MSMEG_0637|M.smegmatis_MC2_155 DGYREAMTAATSLWLAGRAE-RPTPP-YLDETNCTADVVVVGAGITGLIT Mflv_0732|M.gilvum_PYR-GCK ---------MSSLWTDGRVE-TPSRPDEVAAVR-TADVVVVGAGITGLTT Mvan_0117|M.vanbaalenii_PYR-1 ---------MSSLWTDGRIE-IASRPDEVAQAH-TADVLVVGAGITGLTT MAB_2503c|M.abscessus_ATCC_199 ---------MNSIWLEGRSGLVARVPLAPDDTTQTVDIAVIGAGITGLTT Mb3567|M.bovis_AF2122/97 ------------------------------MTVQEFDVVVVGSGAAGMVA Rv3537|M.tuberculosis_H37Rv ------------------------------MTVQEFDVVVVGSGAAGMVA MMAR_2694|M.marinum_M ----------------------------MTSWTDDVDVVVIGFGIAGGCA MUL_3063|M.ulcerans_Agy99 SPEIKAFYDYIKRAALNTEIPATVSSDTVTSWTDDVDVVVIGFGIAGGCA *: *:* * :* : MAV_2749|M.avium_104 AALLARAGKDVLVLEARTVGACATANTTAKISLLQGSQLSKVLPRHGR-- TH_1303|M.thermoresistible__bu AVLLARGGKDVLVVEAAYVGAGATGNTTAKISVLQGSRMSKILAKHGP-- MSMEG_0637|M.smegmatis_MC2_155 AVLLARAGKDVLVLEAYTAGAGTTGNTTAKVSLLQGTKMSKILRKHGA-- Mflv_0732|M.gilvum_PYR-GCK ALLLARAGKKVVVVEARHIGACATGNTTGKVSVLQGSKLANVAGKHGT-- Mvan_0117|M.vanbaalenii_PYR-1 AVLLARAGKKVLVVEARHVGACATGNTTGKVSVLQGTKLARIRAKHGP-- MAB_2503c|M.abscessus_ATCC_199 ALLLARAGLEVVVLEARSAGDGTTGNSTGKISALHGTKLSRIAHRHGH-- Mb3567|M.bovis_AF2122/97 ALVAAHRGLSTVVVEKAPHYGGSTARSGGGVWIPN-NEVLKRRGVRDTPE Rv3537|M.tuberculosis_H37Rv ALVAAHRGLSTVVVEKAPHYGGSTARSGGGVWIPN-NEVLKRRGVRDTPE MMAR_2694|M.marinum_M AVAAAAAGARVLVLERAAAAGGTTSLAGGHFYLGGGTAVQQATGHSDTPD MUL_3063|M.ulcerans_Agy99 AVAAAAAGARVLVLERAAAAGGTTSLAGGHFYLGGGTAVQQATGHSDTPD * * * .:*:* :*. : . . . : . . MAV_2749|M.avium_104 ----------------EVTRAYVDGNREGQEWVLGHCEAHGVAVQREDAY TH_1303|M.thermoresistible__bu ----------------RRARQYVEGNLEGLEWLVRHCAAHGLSVQREDAY MSMEG_0637|M.smegmatis_MC2_155 ----------------KVAGQYVQGNLEGQEWLAGYCDANGLSLQREDAY Mflv_0732|M.gilvum_PYR-GCK ----------------DTLRAYVLGNTEGRDWLLRYCDEHGISAQREDDH Mvan_0117|M.vanbaalenii_PYR-1 ----------------DVLSAYVTGNAEGRDWLIRYHDDHGLAYQREDDH MAB_2503c|M.abscessus_ATCC_199 ----------------AVARAYTTGNTEGRDWLLRYCEEHGVPTQTEDAY Mb3567|M.bovis_AF2122/97 AARTYLHGIVGEIVEPERIDAYLDRGPEMLSFVLKH-TPLKMCWVPGYSD Rv3537|M.tuberculosis_H37Rv AARTYLHGIVGEIVEPERIDAYLDRGPEMLSFVLKH-TPLKMCWVPGYSD MMAR_2694|M.marinum_M EMYKYLVAVS-RQPDHAKIRAYCDGSVEHFNWLEDLGFQFERSYFPGKAV MUL_3063|M.ulcerans_Agy99 EMYKYLAAVS-RQPDHAKIRAYCDGSVEHFNWLEDLGFQFERSYFPGKAV * . * .:: MAV_2749|M.avium_104 TYAQSVRGVPSARAEFE---ACQAVGLPVVWQDDAE-------------- TH_1303|M.thermoresistible__bu TFAQSLQGVPAARTEYL---AAKIAGLDVEWVDDAEG-G----------- MSMEG_0637|M.smegmatis_MC2_155 TYAQSEKGLASARAEYD---ACREVGLDADWVDAADAPD----------- Mflv_0732|M.gilvum_PYR-GCK AYAQNEKGLGTARKILA---ACREANLDAQWVDEAD-------------- Mvan_0117|M.vanbaalenii_PYR-1 SYAQAESGLSTARDVLA---ACREAGVDAQWVDEAD-------------- MAB_2503c|M.abscessus_ATCC_199 TYAQTREGTAGARDEWN---ACLQAGLPVRWETTAD-------------- Mb3567|M.bovis_AF2122/97 YYPEAPGGRPGGRSIEPKPFNARKLGADMAGLEPAYGKVPLNVVVMQQDY Rv3537|M.tuberculosis_H37Rv YYPEAPGGRPGGRSIEPKPFNARKLGADMAGLEPAYGKVPLNVVVMQQDY MMAR_2694|M.marinum_M IQPNTEGLMFTG-NEKVWPFFEKAVPAPRGHKVPVPGDT----------- MUL_3063|M.ulcerans_Agy99 IQPNTEGLMFTG-NEKVWPFFEKAVPAPRGHKVPVPGDT----------- .: . . MAV_2749|M.avium_104 -----------------------------------VPFAYHGGVRLADQA TH_1303|M.thermoresistible__bu -----------------------------------VPFPFHGAVRLADQA MSMEG_0637|M.smegmatis_MC2_155 -----------------------------------VPFPFAGGVRLPDQA Mflv_0732|M.gilvum_PYR-GCK -----------------------------------VPFPFAGGVRLREQA Mvan_0117|M.vanbaalenii_PYR-1 -----------------------------------VPFPFQGGVRVREQA MAB_2503c|M.abscessus_ATCC_199 -----------------------------------TPFPYYGGVRLPDQA Mb3567|M.bovis_AF2122/97 VRLNQLKRHPRGVLRSMKVGARTMWAKATGKNLVGMGRALIGPLRIGLQR Rv3537|M.tuberculosis_H37Rv VRLNQLKRHPRGVLRSMKVGARTMWAKATGKNLVGMGRALIGPLRIGLQR MMAR_2694|M.marinum_M ----------------------------------GGASMVIDLLLKRAAS MUL_3063|M.ulcerans_Agy99 ----------------------------------GGASMVIDLLLKRGAS . : MAV_2749|M.avium_104 QFDPMPFLDSLAVELLGRGGRLVEHTRVRRVSWRGKGVRVHANQGS---D TH_1303|M.thermoresistible__bu QFDPMPLLDSLVVELEERGGRLVQGLRVHKVSGRGDGLTLHARSG----- MSMEG_0637|M.smegmatis_MC2_155 QFDPMPLLDKLIVELDERNGRLVEGTRVLGVSQDSSGLKIKVRSH----- Mflv_0732|M.gilvum_PYR-GCK QIDPMPYLSSVVAELESHGGTVLQGVRATSVSG-VRSVTVTLRMTTRPDD Mvan_0117|M.vanbaalenii_PYR-1 QLDPVPYLGSLVTELEKHGGTLLQGVRATTVTG-TDPVRVRFRLTDTAQD MAB_2503c|M.abscessus_ATCC_199 QFNPAQLVESMVAQLEDHGAHFFSGMRVRSISG-RGPLRIKGDYAH---D Mb3567|M.bovis_AF2122/97 AGVPVELNTAFTDLFVENGVVSGVYVRDSHEAESAEPQLIRARRG---VI Rv3537|M.tuberculosis_H37Rv AGVPVELNTAFTDLFVENGVVSGVYVRDSHEAESAEPQLIRARRG---VI MMAR_2694|M.marinum_M LGVQIRYETGATELIVD-GSGTAARVAGVMWKRFTETGAIKAKS----VI MUL_3063|M.ulcerans_Agy99 LGVQIRYETGATELIVA-GSGTAARVAGVMWKRFTETGAIKAKS----VI : . : MAV_2749|M.avium_104 AAGHDVELHADQLVLATGIPILDRGGYFARVKPSRSYCLAFKVPGNITRP TH_1303|M.thermoresistible__bu -AGDEFDLRADRCVLATGIPILDRGGFFARLEPNRSYCLAYEVPGEITRG MSMEG_0637|M.smegmatis_MC2_155 -TGTELDVRAGQCVLATGIPILDRGGFFARLSPHRSYCLAFRVPGAVTRG Mflv_0732|M.gilvum_PYR-GCK TRDEDFSITAERCVLATGIPVLDRGFFFARAEPMRSYCMAFDVPGELTRS Mvan_0117|M.vanbaalenii_PYR-1 TRDEQFSVTARHCVLATGTPILDRGMFFARVEAKRSYCLAFDVPGDITTP MAB_2503c|M.abscessus_ATCC_199 AGAGEFALEAQRCVLATGTPILDRGGFFAKLTANRSYCMSFDVPGPITRA Mb3567|M.bovis_AF2122/97 LACGGFEHNEQMRIKYQRAPITTEWTVGASANTGDGILAAEKLGAALDLM Rv3537|M.tuberculosis_H37Rv LACGGFEHNEQMRIKYQRAPITTEWTVGASANTGDGILAAEKLGAALDLM MMAR_2694|M.marinum_M IAAGGFVMNPEMVAKYTPKLAEKPFVLGNTYDDGLGIRMGVSAGGATEHM MUL_3063|M.ulcerans_Agy99 IAAGGFVMNPEMVAKYTPKLAEKPFVLGNTYDDGLGIRMGVSAGGATEHM . . . . MAV_2749|M.avium_104 MMISTDSPTRSVRYAPVPDGER-----LIVGGAG-HTVGREKSPSAALDE TH_1303|M.thermoresistible__bu MYISTDSPTRSLRYAPTGAGDL-----LIVGGAG-HPVGHEKNPASSVAE MSMEG_0637|M.smegmatis_MC2_155 MYISTDSPTRSVRYAPTADGDR-----LIVGGAG-HTVGRRSHPSDDVDE Mflv_0732|M.gilvum_PYR-GCK MYISVDSPTRSVRYAPTPGGEK-----LIVGGAG-HPVGRADDPKSAVDE Mvan_0117|M.vanbaalenii_PYR-1 MFLSVDSPTRSVRYAPTAAGSK-----LIVGGAG-HPVGRADNPSKAVAE MAB_2503c|M.abscessus_ATCC_199 MYLSVDAPLRSVRYAPSSTGDR-----LVVGGAG-HVVGHPAHAREALRE Mb3567|M.bovis_AF2122/97 DDAWWGPTVPLVGKPWFALSERNSPGSIIVNMSGKRFMNESMPYVEACHH Rv3537|M.tuberculosis_H37Rv DDAWWGPTVPLVGKPWFALSERNSPGSIIVNMSGKRFMNESMPYVEACHH MMAR_2694|M.marinum_M DQIFVTAPP---YPPSILLTG------VIVNKLGRRFVAEDSYHSRTAGF MUL_3063|M.ulcerans_Agy99 DQIFVTAPP---YPPSILLTG------VIVNKLGRRFVAEDSYHSRTAGF .. . ::*. * : : . MAV_2749|M.avium_104 LSAWTRKHFPG---AVQTHFWSAQDYTPIDHLPYVGPILPNSETIFVATG TH_1303|M.thermoresistible__bu LDEWARRHFPG---AQQRYFWSAQDYSPIDDLPYVGPILPGNESIFVAIG MSMEG_0637|M.smegmatis_MC2_155 LASWAKVHWPG---AIQTHYWSAQDYTPVDELPYVGPLLPGNEKVFVATG Mflv_0732|M.gilvum_PYR-GCK LGRWATLHYPG---AVQTHFWSAQDYHPADELPYVGPLLPKLENILVATG Mvan_0117|M.vanbaalenii_PYR-1 LSHWAALHYPG---AVQTHYWSAQDYHPDDEVPFIGPLLPMHESVLVATG MAB_2503c|M.abscessus_ATCC_199 LAGWAQTHYPG---ATRTHSWAAQDYATISELPYAGPLLPGGKRIYLATG Mb3567|M.bovis_AF2122/97 MYGGEHGQGPGPGENIPAWLVFDQRYRDRYIFAGLQPGQRIPSRWLDSGV Rv3537|M.tuberculosis_H37Rv MYGGEHGQGPGPGENIPAWLVFDQRYRDRYIFAGLQPGQRIPSRWLDSGV MMAR_2694|M.marinum_M IMD---------QPDSAAYLIVDEAHLQHPKMP-LVP------------L MUL_3063|M.ulcerans_Agy99 IMD---------QPDSAAYLIVDEAHLQHPKMP-LVP------------L : : : .. * MAV_2749|M.avium_104 FNKWGMTNGAAAALALSSRILGGRMDWARAFASWS-PHELSGLATAVQAN TH_1303|M.thermoresistible__bu FDKWGMTNGAAAALALSSRILGGRTDWAEAFASWS-PHEVSGIPKAMMLN MSMEG_0637|M.smegmatis_MC2_155 FDKWGMTNGTAAALALSSRILGGRMDWSQAFDSWS-PHELSGIPTALKVN Mflv_0732|M.gilvum_PYR-GCK FDKWGMTNGVAAALALTSRILGGRMDWARAFASWS-PHELSGIPTALQMN Mvan_0117|M.vanbaalenii_PYR-1 FDKWGMTNGVAAALALSARILGGRMDWAQTFASWR-LHELRGVPTALQAN MAB_2503c|M.abscessus_ATCC_199 YDKWGMTNGIAASLALSSQILGGRMDWANAFASWS-ALDLRAIPAAIRLG Mb3567|M.bovis_AF2122/97 IVQADTLAELAGKAGLPADELTATVQRFNAFARSGVDEDYHRGESAYDRY Rv3537|M.tuberculosis_H37Rv IVQADTLAELAGKAGLPADELTATVQRFNAFARSGVDEDYHRGESAYDRY MMAR_2694|M.marinum_M IDGWESVAEMEAALGIPDGNLVATLDRYNTYAARGEDPDFHKQPEFLAPQ MUL_3063|M.ulcerans_Agy99 IDGWESVAEMEAALGIPDCNLVAALDRYNTYAARGEDPDFHKQPEFLAPQ . .:. * . : .:: : MAV_2749|M.avium_104 LEVGFNLTKGWITPAVRIGRRSPVDGDGGVVSGPPWHLQARCRVDGTEHR TH_1303|M.thermoresistible__bu LQVGMYLARGWLTPVTRTGDRSPDDG-CGVVSGPPWHLQARSRVDGVEHR MSMEG_0637|M.smegmatis_MC2_155 LEVGFNMAKGWVTPILRRGDGVPDDG--GVVAGPPWRMEACSVVDGVERR Mflv_0732|M.gilvum_PYR-GCK FEVGLHLAKGWVTPVTTP-AGPPAEG-EGIVTGPPWNLRACSVVDGVERT Mvan_0117|M.vanbaalenii_PYR-1 MKVGLHLANGWLAPLTSS-AEEPADG-TGVVSGPPWRLRATSVVDGVQRT MAB_2503c|M.abscessus_ATCC_199 SRVARDFASGWATAMLTS-----------------------------RPE Mb3567|M.bovis_AF2122/97 YGDPSNKPNPNLGEVGHPPYYGAKMV--PGDLGTKGGIRTDVNGRALRDD Rv3537|M.tuberculosis_H37Rv YGDPSNKPNPNLGEVGHPPYYGAKMV--PGDLGTKGGIRTDVNGRALRDD MMAR_2694|M.marinum_M DKGPWGAFDMSLGKAMYAGFT-------------LGGLATSVDGEVLRSD MUL_3063|M.ulcerans_Agy99 DKGPWGAFDMSLGKAMYAGFT-------------LGGLATSVDGEVLRSD . MAV_2749|M.avium_104 VSPVCPHLGGIVNWNDADKAWECPLHGSRFAPDGTLLEGPATRDLTASR- TH_1303|M.thermoresistible__bu VSPVCPHLGGIVNWNDADQAWECPLHGSRFAPDGALLEGPATRGLTAS-- MSMEG_0637|M.smegmatis_MC2_155 VSPVCPHLGGIVEWNDSDEAWECPLHGSRFAPDGTLLEGPATHGLTPAP- Mflv_0732|M.gilvum_PYR-GCK VSPVCPHLGGIVEWNNIDHAWECPLHGSRFAPDGTLLEGPATRGLT---- Mvan_0117|M.vanbaalenii_PYR-1 VSPVCPHLGGIVKWNDSDRAWECPLHGSRFAPDGALLEGPATRGLSGCRP MAB_2503c|M.abscessus_ATCC_199 HAPVCTHLGGITTWNDAEDIWECPLHGSCFDSGGSVLWGPATEPLDRLPA Mb3567|M.bovis_AF2122/97 GSIIDGLYAAGNVSAPVMG-HTYPGPGGTIGPAMTFGYLAALHIADQAGK Rv3537|M.tuberculosis_H37Rv GSIIDGLYAAGNVSAPVMG-HTYPGPGGTIGPAMTFGYLAALHIADQAGK MMAR_2694|M.marinum_M GSVVAGLYAAGACASNIAQDGKGYASGTQLGEGSFFGRRAGAHAAAHAGA MUL_3063|M.ulcerans_Agy99 GSVVAGLYAAGACASNIAQDGKGYASGTQLGEGSFFGRRAGAHAAAHACA : : .. * : . .. . MAV_2749|M.avium_104 ------------ TH_1303|M.thermoresistible__bu ------------ MSMEG_0637|M.smegmatis_MC2_155 ------------ Mflv_0732|M.gilvum_PYR-GCK ------------ Mvan_0117|M.vanbaalenii_PYR-1 AQLRNVSEGLRP MAB_2503c|M.abscessus_ATCC_199 DGAR-------- Mb3567|M.bovis_AF2122/97 R----------- Rv3537|M.tuberculosis_H37Rv R----------- MMAR_2694|M.marinum_M RVAP-------- MUL_3063|M.ulcerans_Agy99 RVAP--------