For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4650 | - | - | 100% (536) | long chain fatty acid-CoA ligase |
| M. thermoresistible (build 8) | TH_3067 | - | 1e-59 | 33.08% (526) | PUTATIVE AMP-binding enzyme, putative |
| M. thermoresistible (build 8) | TH_2068 | fadD3 | 7e-59 | 33.14% (525) | PROBABLE FATTY-ACID-CoA LIGASE FADD3 (FATTY-ACID-CoA |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2533c | fadD35 | 3e-82 | 37.12% (528) | AMP-binding domain protein |
| M. gilvum PYR-GCK | Mflv_4867 | - | 5e-79 | 35.82% (536) | acyl-CoA synthetase |
| M. tuberculosis H37Rv | Rv2505c | fadD35 | 3e-82 | 37.12% (528) | AMP-binding domain protein |
| M. leprae Br4923 | MLBr_02546 | fadD2 | 5e-44 | 30.00% (490) | acyl-CoA synthetase |
| M. abscessus ATCC 19977 | MAB_4377c | - | 1e-76 | 35.98% (528) | AMP-binding domain protein |
| M. marinum M | MMAR_3852 | fadD35 | 5e-78 | 36.35% (520) | fatty-acid-CoA ligase FadD35 |
| M. avium 104 | MAV_5077 | - | 0.0 | 65.79% (535) | long chain fatty acid-CoA ligase |
| M. smegmatis MC2 155 | MSMEG_5649 | - | 2e-76 | 35.97% (531) | acyl-CoA synthetase |
| M. ulcerans Agy99 | MUL_4126 | fadD3 | 9e-46 | 30.66% (486) | acyl-CoA synthetase |
| M. vanbaalenii PYR-1 | Mvan_1563 | - | 1e-77 | 35.13% (538) | acyl-CoA synthetase |
CLUSTAL 2.0.9 multiple sequence alignment
TH_4650|M.thermoresistible__bu --------------MTHLEQAYWPADR--SVPLLETTVSELLRDR-----
MAV_5077|M.avium_104 --------------MRHLTEARWDADR--SVPLTDHTVGGLLAAR-----
Mflv_4867|M.gilvum_PYR-GCK -----------------MTGSYDAGPT--DVAILEETIGANFARI-----
Mvan_1563|M.vanbaalenii_PYR-1 -----------------MSQSYDAGPT--DTAILEETIGANFERI-----
MSMEG_5649|M.smegmatis_MC2_155 ------------------MKSYDAGPT--GAPVLEETIGANFERI-----
MAB_4377c|M.abscessus_ATCC_199 ------------------MKAYDAGAT--LSPIIEETIGENFERI-----
Mb2533c|M.bovis_AF2122/97 --------MAAAEVVDPNRLSYDRGPS--APSLLESTIGANLAAT-----
Rv2505c|M.tuberculosis_H37Rv --------MAAAEVVDPNRLSYDRGPS--APSLLESTIGANLAAT-----
MMAR_3852|M.marinum_M --------MATTAAADQNQLSYDRGPI--APALLEMTIGANLAAT-----
MUL_4126|M.ulcerans_Agy99 ------------------------------MTSDPRTVPTALDRL-----
MLBr_02546|M.leprae_Br4923 MTKLRHYLERGAAEVHYLRSIFESGALGFEPPLTYAAMAVAMRKWGDLAM
. :: :
TH_4650|M.thermoresistible__bu -----ADEFGERVALIGTRHGTGETERLSYAEVYAEAARVAAGLSALAR-
MAV_5077|M.avium_104 -----ALEHPHRVALVGQRHGSGDRVRLSYAELLDEACRAGDALSSLVT-
Mflv_4867|M.gilvum_PYR-GCK -----ARTHPGRDALVDVAG----GRRWTYAELDAEIDTVARGLMAIGVE
Mvan_1563|M.vanbaalenii_PYR-1 -----AATYPDHEALVDVTG----GRRWTYAELDREIDTVAKGLMSLGTE
MSMEG_5649|M.smegmatis_MC2_155 -----AATYPEHEALVEVAT----GRRWTYAELNDEIDATARGLMALGVD
MAB_4377c|M.abscessus_ATCC_199 -----ARAHPDVGALVDVSG----DRRWTYRELDAEINRVARGLMSLGVA
Mb2533c|M.bovis_AF2122/97 -----AARYGHREALVDMVA----RRRFNYSELLTDVHRLATGLVRAGIG
Rv2505c|M.tuberculosis_H37Rv -----AARYGHREALVDMVA----RRRFNYSELLTDVHRLATGLVRAGIG
MMAR_3852|M.marinum_M -----ASQCESRDALVDVRS----GRRWSYAQLLTDVRQLATGLVRAGIG
MUL_4126|M.ulcerans_Agy99 -----VRRLPNHDALVTD------ERSFTVSELNDEVYRAAAALIELGVK
MLBr_02546|M.leprae_Br4923 LPAMPARRSPHRAALIDEEG------TLTYKELDRAAHALANGLIAKGVR
. **: . :: . .*
TH_4650|M.thermoresistible__bu PGSLVALWAPNVIEWPIIQYGAALAGVVLVALNPVLRDDELEYALRHSRA
MAV_5077|M.avium_104 PGGFLALWAPNVVEWPIIQYGAALAGVVLVALNPVLREDELAYALRHCGA
Mflv_4867|M.gilvum_PYR-GCK RGDRVGIWAPNCPEWVIVQYATAKIGAILVNINPAYRTHELRYVLEQSGV
Mvan_1563|M.vanbaalenii_PYR-1 SGDRVGIWAPNCPEWTIVQYATAKIGAILVNINPAYRTHELSYVLEQSGV
MSMEG_5649|M.smegmatis_MC2_155 KGDRVGIWAPNCAEWIMTQFAAAKVGAILVNINPAYRTHEVAYVLRQSGV
MAB_4377c|M.abscessus_ATCC_199 AGDRVGIWAPNCAEWVLVQYATAKIGAILVNINPAYRTHELAYALNQSGV
Mb2533c|M.bovis_AF2122/97 PGDRVGIWAPNRWEWVLVQYATAEIGAILVTINPAYRVREVEYALRQSGV
Rv2505c|M.tuberculosis_H37Rv PGDRVGIWAPNRWEWVLVQYATAEIGAILVTINPAYRVREVEYALRQSGV
MMAR_3852|M.marinum_M RGDRVGIWAPNRWEWVLVQYATAEIGAVLVTINPAYQARELEYALRQSGV
MUL_4126|M.ulcerans_Agy99 PAARVGIWSPNTWHWVVACLAIHHVGAAMVPLNTRYTADEAADILARTEA
MLBr_02546|M.leprae_Br4923 GGDGIAILARNHRWFVIANYGCARVGARIILLNSEFSGPQIKEVSEREGA
. :.: : * : : . *. :: :*. : : .
TH_4650|M.thermoresistible__bu EVLLHADVSRDYPMAEVAERVCARIPGLRRVSLSETTVWRAAEP------
MAV_5077|M.avium_104 DVLLHADTSRDYAMLEVAQRVCDAIPGLRRVSLSETARWRSTTP------
Mflv_4867|M.gilvum_PYR-GCK ATLISATQFKTSDYVAMVDEVRPDVPALQRVLFIGTADWDTLRAAGSGVD
Mvan_1563|M.vanbaalenii_PYR-1 STLISATRFKTSDYVAMVDEVRPDVPALQRVLFIGTDDWDRLRSRADVID
MSMEG_5649|M.smegmatis_MC2_155 RTLVSASSFKTSDYASMIAEVRPECPDLLDVVFLDNDDWDRLR--ANQVD
MAB_4377c|M.abscessus_ATCC_199 RTLICAKAFKSSDYVAMASQVMPDAPGLRDVVFIGTSDWTELVAGAERVT
Mb2533c|M.bovis_AF2122/97 AMVIAVASFKDADYAAMLAEVGPRCPDLADVILLESDRWDALAG--AEPD
Rv2505c|M.tuberculosis_H37Rv AMVIAVASFKDADYAAMLAEVGPRCPDLADVILLESDRWDALAG--AEPD
MMAR_3852|M.marinum_M AMVIAASGFKGSDYAAILAEVAPGCPELHDVAFLDGDGWAKLAG--SGAD
MUL_4126|M.ulcerans_Agy99 PVLFAMGHFLGSDRVAGLDRKALPALRHIVRIPIEEPDGTWDEFIETGTD
MLBr_02546|M.leprae_Br4923 KVIIYDD-----EYTKVVSKAEPALGKLRALGVNPDEEEPPGSTDETLAE
:. .
TH_4650|M.thermoresistible__bu -VDAAP--VPHDPDT-VAMLQYTSGTTGKPKGVVLNHRAIVNVARLTMET
MAV_5077|M.avium_104 -SAGMINRAPSDPDQ-PVMLQYTSGTTGRPKGVVLTHRALVNVAKLTMEA
Mflv_4867|M.gilvum_PYR-GCK DADLRRRSGALSNRD-PINIQYTSGTTGFPKGATLSHRNILNNGFFVTEQ
Mvan_1563|M.vanbaalenii_PYR-1 DALLRERSASLSHHD-PVNIQYTSGTTGFPKGATLSHRNILNNGFFVTEQ
MSMEG_5649|M.smegmatis_MC2_155 DAAFHERMATLANTD-PINIQYTSGTTGFPKGATLSHRNILNNGFFVTEL
MAB_4377c|M.abscessus_ATCC_199 ETALRARMSQLSNTD-PINIQYTSGTTGYPKGATLSHRNVLNNGFFVAES
Mb2533c|M.bovis_AF2122/97 LPALQQTAARLDGSD-PVNIQYTSGTTAYPKGVTLSHRNILNNGYLVGEL
Rv2505c|M.tuberculosis_H37Rv LPALQQTAARLDGSD-PVNIQYTSGTTAYPKGVTLSHRNILNNGYLVGEL
MMAR_3852|M.marinum_M LVALQEIATTLSADD-PINIQYTSGTTGFPKGVTLSHRNILNNGYLVGEL
MUL_4126|M.ulcerans_Agy99 TGAVTARAAAVSPDD-VSDILFTSGTTGRSKGVLCAHRQSLSASASWAAN
MLBr_02546|M.leprae_Br4923 LIARSSSAPAPKVRKRASIIILTSGTTGTPKGANRNTPASLAPLGGILSK
: *****. .**. :
TH_4650|M.thermoresistible__bu LRVPPGAVSFNPLPMFHTAGCVIATLGPLWVG-GTAILAERFTPQSALEV
MAV_5077|M.avium_104 VEAPPAAICVNPLPLFHTAGCVIATLGPLWVG-GTAVPCGRPAPGAVLET
Mflv_4867|M.gilvum_PYR-GCK IRLQPGDRLCIPVPFYHCFGMVMGNLGCTTHGATIVIPAPAFDPGLTLRA
Mvan_1563|M.vanbaalenii_PYR-1 IRLGPGDRLCIPVPFYHCFGMVMGNLGCTTHGATMVIPAPGFDPGQTLKT
MSMEG_5649|M.smegmatis_MC2_155 IALGPDDRLCIVPPFYHCFGMVMGTLGAVSHGTTIVIPAPGFDPGITLSA
MAB_4377c|M.abscessus_ATCC_199 IQLQAGDRLCIPVPFYHCFGMVMGNLGCTTHGATIVMPAPGFDPGRTLEA
Mb2533c|M.bovis_AF2122/97 LGYTAQDRICIPVPFYHCFGMVMGNLAATSHGAAMVIPAPGFDPAATLRA
Rv2505c|M.tuberculosis_H37Rv LGYTAQDRICIPVPFYHCFGMVMGNLAATSHGAAMVIPAPGFDPAATLRA
MMAR_3852|M.marinum_M LEYTAEDRICIPVPFYHCFGMVMGNLAATSHGACMVIPAPGFDPAATLRA
MUL_4126|M.ulcerans_Agy99 GKITADDRHLCINPFFHNFGYKAGILACLQTG-ATLFPHLTFDPLRTLQA
MLBr_02546|M.leprae_Br4923 VPFRAHEVTLLPAPMFHALGYLHATLAMFLGS--TLVLRRRFKPATVLED
. *::* * . *. . . * .*
TH_4650|M.thermoresistible__bu MRAEGVQVLFYVPTVLAALLDQQR--SSTQPAPRLGIIMGGASNVDPALI
MAV_5077|M.avium_104 LREQHAAVLFYVPAVLRALVEYQR--ESTETAPKLDIIMGGASEVSAELI
Mflv_4867|M.gilvum_PYR-GCK IETERCTAVYGVPTMFIAMQNHPD--FAERDLSTLRTGIMAGAVCPVEVM
Mvan_1563|M.vanbaalenii_PYR-1 IETERCTAVYGVPTMFIAMQNHAD--FAERDLSSLRTGIMAGAVCPVEVM
MSMEG_5649|M.smegmatis_MC2_155 VESEKCTGLYGVPTMFIAMLGHPD--FANFDLSSLRTGIMAGSVCPIEVM
MAB_4377c|M.abscessus_ATCC_199 IERERCVGVYGVPTMFIAMLADPG--FAHRDLSTLRTGIMAGSVCPVEVM
Mb2533c|M.bovis_AF2122/97 VQDERCTSLYGVPTMFIAELGLPD--FTDYELGSLRTGIMAGAACPVEVM
Rv2505c|M.tuberculosis_H37Rv VQDERCTSLYGVPTMFIAELGLPD--FTDYELGSLRTGIMAGAACPVEVM
MMAR_3852|M.marinum_M VQAERCTSLYGVPTMFIAELGLAD--FATYDLSSLRTGIMAGSTCPVEVM
MUL_4126|M.ulcerans_Agy99 IERHRITVLPGPPTIYQTLLDHPA--RDDYDLSSLRFAVTGAATVPVVLV
MLBr_02546|M.leprae_Br4923 IEKHQATAMVVVPVMLSRILDTLENLETKSDLSSLRVVFVSGSQLGAELA
:. . : *.: * . ..: :
TH_4650|M.thermoresistible__bu TGAADIFGAP-VFNLYGQTELAPVLTLTRPDDGPQDRLSTVGRPLPQVEC
MAV_5077|M.avium_104 DSATATFNAR-VFNLYGQTELAPVLTVTRPGDSRRDRLYTVGRPLPQVDC
Mflv_4867|M.gilvum_PYR-GCK KRCVEEMHLTEMSIAYGMTETSPVSCQTLIDDDLERRTSTIGRVHPHVEI
Mvan_1563|M.vanbaalenii_PYR-1 KRCVEEMNMSEISIAYGMTETSPVSCQTLIDDDLERRTSSIGRVHPHVEI
MSMEG_5649|M.smegmatis_MC2_155 KRVVADMHMAEVAICYGMTETSPVSCQTLIDDDLDRRTATIGRAHPHVEI
MAB_4377c|M.abscessus_ATCC_199 KRCIDEMHMAGVAIAYGMTETSPVSCQTLFDDDLDRRTATVGRAHPHIEI
Mb2533c|M.bovis_AF2122/97 RKVISRMHMPGVSICYGMTETSPVSTQTRADDSVDRRVGTVGRVGPHLEI
Rv2505c|M.tuberculosis_H37Rv RKVISRMHMPGVSICYGMTETSPVSTQTRADDSVDRRVGTVGRVGPHLEI
MMAR_3852|M.marinum_M RKVIDQMHMAGISICYGMTETSPVATQTRSNDSLQRRVTTVGRVGPHLEI
MUL_4126|M.ulcerans_Agy99 ERMQSELDIDIVLTAYGLTEANGMGTMCRADDDALTVATTCGRPFADFEL
MLBr_02546|M.leprae_Br4923 TRALEELGPV-IYNMYGSTEIAFATIAG--PKDLQINSATVGPVVKGVKV
: : ** ** .. : * ..
TH_4650|M.thermoresistible__bu KIIDPHTQQTVPVGVEGEICARGYQQFLEYLHDPHATAQALDREGFVRTG
MAV_5077|M.avium_104 KIIDPIDGRVLPVGQVGEICARGYQQFVEYLHDPDATQSALDTEGFVRTG
Mflv_4867|M.gilvum_PYR-GCK KIVDPETGEIVERGTPGEFCTRGYSVMLGYWREDEKTAQAIDADGWMHTG
Mvan_1563|M.vanbaalenii_PYR-1 KIVDPDTGHVVERGTPGEFCTRGYSVMLGYWRDEEKTAQAVDADGWMHTG
MSMEG_5649|M.smegmatis_MC2_155 KIIDPDTGETVERGQPGEFCTRGYSVMLGYWNDDEKTREAVDADGWMHTG
MAB_4377c|M.abscessus_ATCC_199 KIVDPNSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHTG
Mb2533c|M.bovis_AF2122/97 KVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHTG
Rv2505c|M.tuberculosis_H37Rv KVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHTG
MMAR_3852|M.marinum_M KVVDPATGRIVPRGTAGEFCTRGYSVMSGYWKAPERTAEVIDPEGWMHTG
MUL_4126|M.ulcerans_Agy99 RIG-PDTGEVLLRGP---------NVMLGYLDDPRATAAAIDADGWLHTG
MLBr_02546|M.leprae_Br4923 KILDDSGK-EVPRGQVGRIFVGNAFPFEGYTGG----GGKQIIDGLLSSG
:: : * : * :* : :*
TH_4650|M.thermoresistible__bu DLGRMDERGYVTVTGRLKELIIRGGENIAPAEVEAVLNALDSRVQAVVLG
MAV_5077|M.avium_104 DLGAMDERGFVTVTGRRKELIIRGGENIAPAEVEESVAQHDCIDEVVAVG
Mflv_4867|M.gilvum_PYR-GCK DLAVMRPDGYCNIVGRIKDVVIRGGENIYPREIEEFLYTHPDVEDAHVIG
Mvan_1563|M.vanbaalenii_PYR-1 DLAVMRPDGYCNIVGRIKDVVIRGGENIYPREVEEFLYTHPDIEDAQVVG
MSMEG_5649|M.smegmatis_MC2_155 DLAVMREDGYCTIVGRIKDMVIRGGENIYPREIEEFLYTHPDIDDAQVIG
MAB_4377c|M.abscessus_ATCC_199 DLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVG
Mb2533c|M.bovis_AF2122/97 DLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIG
Rv2505c|M.tuberculosis_H37Rv DLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIG
MMAR_3852|M.marinum_M DLALMDECGYVQITGRIKDIVVRGGENISPREIEEFLHSHPDIVDAHVVG
MUL_4126|M.ulcerans_Agy99 DIGVLDEAGNLRITDRLKDMYICGGFNVYPAEVEQVLARLDGVADVAVIG
MLBr_02546|M.leprae_Br4923 DVGYFDEHDLLYISGRDDEMIVSGGENVFPAEVEDLISGHPEVVEATAIG
*:. : . : .* .:: : ** *: * *:* : : .:*
TH_4650|M.thermoresistible__bu VPDDRYGEVVAAVLRSDDKVDAAMKCRLVQQARDRLAGYKIPVRWFTVRE
MAV_5077|M.avium_104 LPDDHFGEIVAVVCRLATTASAGLKDSLLAHARARLAAFKVPARWFVADA
Mflv_4867|M.gilvum_PYR-GCK VPDDRYGEEVCAWIRMRPGRTALDAAAVREFATDKLAHYKIPRYVHVVDE
Mvan_1563|M.vanbaalenii_PYR-1 VPDARYGEEICAWIRMRPGRRALDAAAVREFAAGKLAHYKIPRYVHVVDE
MSMEG_5649|M.smegmatis_MC2_155 VPDERYGEEICAWIRMKPGRPPLDADKVREFASGKLAHYKIPRYVHVVDE
MAB_4377c|M.abscessus_ATCC_199 VPDEKYGEELCAWVRMRPDRVVIDAVAIRAFASGRLAHYKIPRYVHVVES
Mb2533c|M.bovis_AF2122/97 VPDAKYGEELMAVVKLRNDAPELTIERLREYCMGRIARFKIPRYLWIVDE
Rv2505c|M.tuberculosis_H37Rv VPDAKYGEELMAVVKLRNDAPELTIERLREYCMGRIARFKIPRYLWIVDE
MMAR_3852|M.marinum_M VPDERMGEELMAVVKLRAGAPELTTGLLREYCAGQIAKFKIPRYLRLVDE
MUL_4126|M.ulcerans_Agy99 IPDHRLGEVGRAFIVARPG-FNLDEKSVIDYTREHLANFKAPRSVRFVDT
MLBr_02546|M.leprae_Br4923 VDDKEWGARLRAFVVKKQD-ATIDEDAIKAYVRDHLARYKVPREVIFLEE
: * . * . : ::* :* *
TH_4650|M.thermoresistible__bu FPVTPTGKVQRFALRDAILRQEISEL-------
MAV_5077|M.avium_104 FPVTPTGKVRRFALREAILRDELEEL-------
Mflv_4867|M.gilvum_PYR-GCK FPMTVTGKIRKVEMREVSARLLGL---------
Mvan_1563|M.vanbaalenii_PYR-1 FPMTVTGKIRKVEMREVSAGLFAD---------
MSMEG_5649|M.smegmatis_MC2_155 FPMTVTGKIRKVQMREETVALLGLEA-------
MAB_4377c|M.abscessus_ATCC_199 FPMTVTGKVRKIEMRQQTIQIFGLPEPGRTDEQ
Mb2533c|M.bovis_AF2122/97 FPMTVTGKVRKVEMRQQALEYLRGQQ-------
Rv2505c|M.tuberculosis_H37Rv FPMTVTGKVRKVEMRQQALEYLRGQQ-------
MMAR_3852|M.marinum_M FPMTVTGKVRKVEMRQQAIEYLRGQH-------
MUL_4126|M.ulcerans_Agy99 LPRNAGGKVVKPQLRELA---------------
MLBr_02546|M.leprae_Br4923 LPRNPTGKVLKRELRDFEVH-------------
:* . **: : :*: