For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_4580 | - | - | 100% (419) | putative transcriptional regulator, AraC family protein |
M. thermoresistible (build 8) | TH_3797 | - | e-149 | 61.47% (423) | PUTATIVE virulence factor Mce family protein |
M. thermoresistible (build 8) | TH_3918 | - | e-138 | 59.52% (415) | PUTATIVE virulence factor Mce family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0607 | mce2Da | 1e-77 | 40.58% (382) | hypothetical protein Mb0607 |
M. gilvum PYR-GCK | Mflv_0649 | - | 1e-148 | 60.05% (438) | virulence factor Mce family protein |
M. tuberculosis H37Rv | Rv1969 | mce3D | 1e-156 | 65.70% (414) | MCE-family protein MCE3D |
M. leprae Br4923 | MLBr_02592 | mce1D | 5e-81 | 41.36% (382) | putative secreted protein |
M. abscessus ATCC 19977 | MAB_4150c | - | 1e-69 | 35.28% (411) | MCE-family protein |
M. marinum M | MMAR_2885 | mce3D | 1e-159 | 67.07% (416) | MCE-family protein Mce3D |
M. avium 104 | MAV_2535 | - | 1e-147 | 60.87% (437) | virulence factor mce family protein |
M. smegmatis MC2 155 | MSMEG_0349 | - | 1e-146 | 60.00% (425) | virulence factor mce family protein |
M. ulcerans Agy99 | MUL_2867 | mce3D | 1e-157 | 66.35% (416) | MCE-family protein Mce3D |
M. vanbaalenii PYR-1 | Mvan_3979 | - | 1e-153 | 63.94% (416) | virulence factor Mce family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb0607|M.bovis_AF2122/97 MSTIFDIRSLRLPKLSAKVVVVGGLVVVLAVVAAAAGARLYRKLTTTTVV MLBr_02592|M.leprae_Br4923 MSTIFDVRKLKLLRLSRAPVIVGSLVVVLALVVGFVGWRLYQKLTNNTVV MMAR_2885|M.marinum_M ----------MTTRLRRTRSVLATTLILVLVAGVIAAMRTAGDATRTLVV MUL_2867|M.ulcerans_Agy99 ----------MTTRLRRTRSVLATTLILVLVAGVIAAMRTAGDATRTLVV Rv1969|M.tuberculosis_H37Rv ----------MTTKLRRARSVLAT--ALVLVAGVILAMRTADAAARTTVV Mvan_3979|M.vanbaalenii_PYR-1 ----------MSARLRRARGGLAAVLVLTLAAGFLVAARAADHVERIWVT MSMEG_0349|M.smegmatis_MC2_155 ------------MRISKKQLTLAAGLVVVMVAGVLVGFRMTGPAARTTIT TH_4580|M.thermoresistible__bu ---------------------VAVALIVVLFAGIVGTVRLAQQGSRMTVV Mflv_0649|M.gilvum_PYR-GCK ------------MTNSRTKLGLAIILVSLVVGGAIAVTRAAHELDRVHVV MAV_2535|M.avium_104 ---------------------MAIALTAVLLGGIVTVVRSAAGVGRTTVV MAB_4150c|M.abscessus_ATCC_199 ------------MTTSKTWLKRGAFAMLSVALVGGLLYWVWPSRGTYKIV . :. Mb0607|M.bovis_AF2122/97 AYFSEALALYPGDKVQIMGVRVGSIDKIEPAGDKMRVTLHYSNKYQVPAT MLBr_02592|M.leprae_Br4923 VYFPAATALYTGDKVQIMGLRVGSIDSIVPAGDKMKVTFHYQNKYKVPAN MMAR_2885|M.marinum_M AYFDNSNGVFAGDDVLIRGVPVGKIVKIEPQPLRSKISFWFDRKYKVPAD MUL_2867|M.ulcerans_Agy99 AYFDNSNGVFAGDDVLIRGVPVGKIVKIEPQPLRSKISFWFDRKYKVPAD Rv1969|M.tuberculosis_H37Rv AYFDNSNGVFAGDDVLIRGVPVGKIVKIEPQPLRAKISFWFDRKYRVPAD Mvan_3979|M.vanbaalenii_PYR-1 AYFENSNGLFAGDDVRILGVPVGRVDSIRPEPTRARITFWVDRRYPVPAD MSMEG_0349|M.smegmatis_MC2_155 AYFANSNGLFAGDDVLILGVPVGKVKEIEPLPERAKVTFWVDKEFQVPAD TH_4580|M.thermoresistible__bu AYFENTTGVFPGDDVRILGVRVGQISAIEPQPDRVKVTFWVDERYPVPAE Mflv_0649|M.gilvum_PYR-GCK AYFDNSNGVFVGDDVRIKGVRVGRIEAIEPQPTQVRITFWFDAKYPVPAD MAV_2535|M.avium_104 GYFANSTGLYNGDSVVILGVPVGKIEKIEPEPDRVRITFWLNDKYKVPAD MAB_4150c|M.abscessus_ATCC_199 GHFASAVGLYPGDDVRILGVKAGRISAVEPREGDVKVTMEMPDKFKVPEG :* : .:: **.* * *: .* : : * :::: .: ** Mb0607|M.bovis_AF2122/97 ATASILNPSLVASRTIQLSPPYTGGPVLQDGAVIPIERTQVPVEWDQLRD MLBr_02592|M.leprae_Br4923 ASAVILNPTLVASRSIQLEPPYKGGPALGDNAVIPLERTQVPVEWDELRD MMAR_2885|M.marinum_M AKAAILSPQLVTGRAIQLTPPYSGGPTMASGAIISQQRTAVPVEWDDLRN MUL_2867|M.ulcerans_Agy99 AKAAILSPQLVTGRAIQLTPPYSGGPTTASGAIISQQRTAVPVEWDDLRN Rv1969|M.tuberculosis_H37Rv AAAAILSPQLVTGRAIQLTPPYAGGPTMADGTVIPQERTVVPVEWDDLRA Mvan_3979|M.vanbaalenii_PYR-1 AKAVILSPQLVTGRAIQLTPAYTGGPVMPTGTVVGQERTAVPVEWDDVRV MSMEG_0349|M.smegmatis_MC2_155 ATAAILSPQLVTGRAIQLTPPYESGPELPDDAVIPIERTAVPVSWDDFRV TH_4580|M.thermoresistible__bu VNAVILSPQLVTGRAIQLTPAYTSGPMLADGAEIPLARTAVPVEWDDVRE Mflv_0649|M.gilvum_PYR-GCK AKAVILSPTLVTSRAIQLTPGYTGGPTLQNNATIPRARTAVPVEFDEFRQ MAV_2535|M.avium_104 VKAAILSPSLVTPRSIQLTPAYTGGPALADHAVIPQQRTAVPVEYDDFRQ MAB_4150c|M.abscessus_ATCC_199 AQAIIMAPNLVTARFVQLTPAYTDGKALQDGASLGLDKTAVPIEWDEVKT . * *: * **: * :** * * .* : : :* **:.:*:.: Mb0607|M.bovis_AF2122/97 SINGILRQLGPTERQPKGPFGDLIESAADNLAGKGRQLNETLNSLSQALT MLBr_02592|M.leprae_Br4923 SITKIISKLGPTKEQPKGPFGDVIESFADGLAGKGKQINATLDSLSRALT MMAR_2885|M.marinum_M QLQRLTELLKPTEPGGVSTLGALINTAADNLRGQGSTIRDAIVELSQTVS MUL_2867|M.ulcerans_Agy99 QLQRLTELLKPTEPGGVSTLGALINTAADNLRGQGSTIRDAIVELSQTVS Rv1969|M.tuberculosis_H37Rv QLQRLTALLQPTRPGGVSTLGALINTAADNLRGQGATIRDTIIKLSQAIS Mvan_3979|M.vanbaalenii_PYR-1 QLQRLTKLLRPTEPGGVSTLGAFINTTADNLRGQGANIRQTVVKLSQALA MSMEG_0349|M.smegmatis_MC2_155 QLEKLTRTLQPETPGGTSALGNFINTAADNLRGEGDNIRDALVKLSKTVT TH_4580|M.thermoresistible__bu QLARVTQLLQPTAPGEPSTLGRAIDTAADNLRGQGPTIRDTIVRLSRAMS Mflv_0649|M.gilvum_PYR-GCK QLERLTALLQPTEPGEVSTLGSLVNTAADNLRGQGPAIRDAIIRLSQSVS MAV_2535|M.avium_104 QLEKLTQVLQPTAPGGTSTLGAFINTAADNLRGQGPDIRKTVIELSQAIS MAB_4150c|M.abscessus_ATCC_199 ELAKLSDSLGPQG-QSKGPVSDFINQAATTFDGNGDSFRNAVRELSQAAG .: : * * .... :: * : *:* :. :: **:: Mb0607|M.bovis_AF2122/97 ALNEGRGDFVAITRSLALFVSALYQNDQQFVALNENLAEFTDWFTKSDHD MLBr_02592|M.leprae_Br4923 ALNEGRGDFFAVLRSLALFVNALHTDDQQFVALNQNLADFTTRLAHSDTD MMAR_2885|M.marinum_M TLSDHRNDIFSTVRNLSTLVSALHDSADLLEQLNHNLAAVSSLLATDPNK MUL_2867|M.ulcerans_Agy99 TLSDHRNDIFSTVRNLSTLVSALHDSADLLEQLNHNLAAVSSLLATDPNK Rv1969|M.tuberculosis_H37Rv ALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDK Mvan_3979|M.vanbaalenii_PYR-1 ILGDHSDDIFTTFTNLSTLVSALHDSADLLEQLNQNMAAVTSLIADDPQK MSMEG_0349|M.smegmatis_MC2_155 TVSDHKDDVFSTLNNLATLVSALRDSTDVLAALNRNMAAVSALLADSPDE TH_4580|M.thermoresistible__bu ALGDHSQDVFGSLRNLSTLVSALHDSTGLLEQLNHNMAAVSALLAEDPDK Mflv_0649|M.gilvum_PYR-GCK ALADHSPDIFTSVRNLSTLVSALQDSTVLIRQLNQNLASVTGLLANEPTE MAV_2535|M.avium_104 ALGDHSNDLFSTVKNLSILVSALHDSSDLLQQLNQNLAEVTGLLANDPNE MAB_4150c|M.abscessus_ATCC_199 RLGDSRTDLFGTIKNLQTLVDALANSNEQIVQFSTHLASVSKVLAASTEN : : *.. .* :* ** . : :. ::* .: :: . Mb0607|M.bovis_AF2122/97 LADTVERIDDVLGTVRKFVSDNRSVLAADVNNLADATTTLVQPEPRDGLE MLBr_02592|M.leprae_Br4923 LSSALQQFNSMLSTVQSFLVKNREVLAADVNNLATVNNTVVQPEPLNGVE MMAR_2885|M.marinum_M VGQAVEDINAVVADVQSFAAENREAVGTASDKLASISNALVAS--LDDIK MUL_2867|M.ulcerans_Agy99 VGQAVKDINAVVADVQSFAAEYREAVGTASDKLASISNALVAS--LDDIK Rv1969|M.tuberculosis_H37Rv IGQAAEDLNAVVADVGSFAAEHREAIGTASDKLASITTALVDS--LDDIK Mvan_3979|M.vanbaalenii_PYR-1 VARTVQDLGGVIGDVKEFADDNREAIGTATDTLASVSTALVDS--LDDLK MSMEG_0349|M.smegmatis_MC2_155 VGQAIADLNSLAVDVKSFVVENRDAVGTTSDVSASISTALVQS--LDDIK TH_4580|M.thermoresistible__bu VGRVVADLHALVGDLQQFVADNREPLEIASTRLDSVGTALVDS--IDDIK Mflv_0649|M.gilvum_PYR-GCK VGDAVKNLNDVVGEVTAFVAANRDTIGATSDKLTSVSQALTDS--TDDIE MAV_2535|M.avium_104 VANAVRNLNDVVGDVRGFVAENRDALGTTSDKLASVTQAVTDS--LGDVK MAB_4150c|M.abscessus_ATCC_199 LGATLGALNQALTDVRGFLGDTNSALIDQVNKLSDFVKIFSDQ--SDDLE :. . : : * .. : . ..:: Mb0607|M.bovis_AF2122/97 TALHVLPTYASNFNNLYYPLHSSLVGQFVFPNFANPIQLICS-AIQAGSR MLBr_02592|M.leprae_Br4923 TFLHVAPTAAANMNQLYHPAHGSVVGVPTITNFANPMQFICS-AIQAGSR MMAR_2885|M.marinum_M QTLHIGPTVLQNFNNIFEPANGALTGALAANDFANPISFLCG-AIQSASR MUL_2867|M.ulcerans_Agy99 QTLHIGPTVLQNLNNIFEPANGALTGALAANDFANPISFLCG-AIQSASR Rv1969|M.tuberculosis_H37Rv QTLHISPTVLQNFNNIFEPANGALTGALAGNNMANPIAFLCG-AIQAASR Mvan_3979|M.vanbaalenii_PYR-1 QTLHIAPGTVANFHNIFEPANGSLTGALAVNNFANPISFICG-AIQAASR MSMEG_0349|M.smegmatis_MC2_155 QSLHIFPTTLANFGNIYEPANGSLTGALAINNFSDPISFICG-AIEAASR TH_4580|M.thermoresistible__bu QALHVAPTVLQNFSNIYEAANGSFTGALAANNFANPIQFLCG-AVQAASR Mflv_0649|M.gilvum_PYR-GCK QLLHIAPTTLSNAANLYQSAQGTLTGALNVANFSDPITFLCG-AVQAASR MAV_2535|M.avium_104 QLLHTAPTAFQNFLNIYQPAQGTLTGALAFNNFANTIQFLCG-AVEAASR MAB_4150c|M.abscessus_ATCC_199 QILHVAPNGLANFYNIYNPAAGTLNGMLSIPNLANPVQFICGGVFETGTK ** * * ::: . .:. * ::::.: ::*. ..::.:: Mb0607|M.bovis_AF2122/97 LGYQESAELCAQYLAPVLDALKFNYLPFGSNPFSSAATLPKEVAYS--EE MLBr_02592|M.leprae_Br4923 LGYQESAELCAQYLSPVLDAIKFNYFPFGLNLFSTAEVLPKEVAYS--EA MMAR_2885|M.marinum_M LGGEQAAKLCVQYLAPILKNRQYNFPPLGENLFVGAQARPNEVTYS--ED MUL_2867|M.ulcerans_Agy99 LGGEQAAKLCVQYLAPILKNRQYNFPPLGENLFVGAQARPNEVTYG--ED Rv1969|M.tuberculosis_H37Rv LGGEQAAKLCVQYLAPIVKNRQYNYPPLGANLFVGAQARPNEVTYS--ED Mvan_3979|M.vanbaalenii_PYR-1 HGAEQSAKLCAQYLAPIVKNRQYNFPPIGENLLVGTQARPNEVTYS--ED MSMEG_0349|M.smegmatis_MC2_155 LGAERSAKLCVQYLAPIVKNRQFNFPPFGENTFVGAQARPNEITFS--ED TH_4580|M.thermoresistible__bu LGAEQAAKLCVQYLAPIVKNRQYNFPPLGLNLFVGAQARPNEVTYS--EP Mflv_0649|M.gilvum_PYR-GCK LNNEQSAKLCVQYLAPIIKNRQYNFPPIGVNPFVGATVRPNEVTYS--ED MAV_2535|M.avium_104 LGAKESAKLCVQYLAPIIKNRQVNFPPLGENLFVGAAARPNELTYS--ED MAB_4150c|M.abscessus_ATCC_199 TEYLKRAEICRERMGPVLRRATFNYAPILLHPINQISAYKGQIIYDTPET . *::* : :.*:: *: *: : : . :: :. * Mb0607|M.bovis_AF2122/97 RLRPPPGYKDTTVPGIFSRDTPFSHGNHEPGWVVAPGMQGMQVQPFTANM MLBr_02592|M.leprae_Br4923 RLQPPSGYKDTTVPGIWVPDTPLSHRNTQPGWIVAPGMQGQQVGPITAAL MMAR_2885|M.marinum_M WMRP-----DYVPPQP----------------------DMPPAERPADVT MUL_2867|M.ulcerans_Agy99 WMRP-----DYVPPQP----------------------DMPPAEPPADVT Rv1969|M.tuberculosis_H37Rv WLRP-----DYVAPVA----------------------DTPP-DPAAAVT Mvan_3979|M.vanbaalenii_PYR-1 WLRP-----DFVPP------------------------AAPPADQPQAVA MSMEG_0349|M.smegmatis_MC2_155 WLRP-----DYIPPAQPVTQDL-------------DPEVLPAEAAPTDGS TH_4580|M.thermoresistible__bu WMRP-----DYVPPLP---------------------AEAAPAASPHGTT Mflv_0649|M.gilvum_PYR-GCK WMRP-----DYVPPQPTLPAATGADPDAPPPLTGPTLPAEAPVPMPDPSN MAV_2535|M.avium_104 WLRP-----DYVPPHPDSPPTGDAPAPPAAGATPAEAPPPAADAPPPAQA MAB_4150c|M.abscessus_ATCC_199 EAKSQAPREDLVWVRPNGAPPPPKPSPQDLSALMLGPDEVNAPPPPGTEV :. * Mb0607|M.bovis_AF2122/97 LTPESLAELLGGPDIAPPAAGNQLARTAECV------------------- MLBr_02592|M.leprae_Br4923 MTPDSLAELMGGPDIEPIQSNLQTPPGPPTAYDEHPVPPPIGLQASVPIP MMAR_2885|M.marinum_M VEPDPAAGLRG--MMVPPGGG----------------------------- MUL_2867|M.ulcerans_Agy99 VEPDPAAGLRG--MMVPPGGG----------------------------- Rv1969|M.tuberculosis_H37Rv VDP--ATGLRG--MMMPPGGGS---------------------------- Mvan_3979|M.vanbaalenii_PYR-1 VDP--DAGLQG--MMVPAGGGVS--------------------------- MSMEG_0349|M.smegmatis_MC2_155 ADP--SAGLPG--LMIPTEAGS---------------------------- TH_4580|M.thermoresistible__bu VAADPAAGLPG--LLLPHGGDR---------------------------- Mflv_0649|M.gilvum_PYR-GCK RQTDPAAGLPG--MMIPHGGGS---------------------------- MAV_2535|M.avium_104 APTNPAEGLRG--MMMPPGGGQ---------------------------- MAB_4150c|M.abscessus_ATCC_199 RPAEPGPVPPGFPVTADDAPPPAIPGAPR--------------------- . * Mb0607|M.bovis_AF2122/97 ---------------------------------- MLBr_02592|M.leprae_Br4923 SPRPDVVPGPVAPTPSPAANVGDPPLPAELGAGQ MMAR_2885|M.marinum_M ---------------------------------- MUL_2867|M.ulcerans_Agy99 ---------------------------------- Rv1969|M.tuberculosis_H37Rv ---------------------------------- Mvan_3979|M.vanbaalenii_PYR-1 ---------------------------------- MSMEG_0349|M.smegmatis_MC2_155 ---------------------------------- TH_4580|M.thermoresistible__bu ---------------------------------- Mflv_0649|M.gilvum_PYR-GCK ---------------------------------- MAV_2535|M.avium_104 ---------------------------------- MAB_4150c|M.abscessus_ATCC_199 ----------------------------------