For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_4388 | - | - | 100% (176) | putative hypothetical protein Mjls_5177 |
M. thermoresistible (build 8) | TH_2579 | - | 5e-60 | 62.43% (173) | PUTATIVE hypothetical protein Mvan_1151 |
M. thermoresistible (build 8) | TH_3234 | - | 2e-42 | 48.26% (172) | PUTATIVE putative hypothetical protein Mvan_4060 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3646c | - | 6e-08 | 34.00% (100) | hypothetical protein Mb3646c |
M. gilvum PYR-GCK | Mflv_1605 | - | 8e-27 | 34.86% (175) | hypothetical protein Mflv_1605 |
M. tuberculosis H37Rv | Rv3616c | - | 6e-08 | 34.00% (100) | hypothetical protein Rv3616c |
M. leprae Br4923 | MLBr_00405 | - | 3e-07 | 38.27% (81) | hypothetical protein MLBr_00405 |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4166 | espA | 3e-08 | 40.24% (82) | ESX-1 secretion-associated protein A, EspA |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_5089 | - | 3e-28 | 34.36% (163) | hypothetical protein MSMEG_5089 |
M. ulcerans Agy99 | MUL_2554 | - | 7e-05 | 29.91% (107) | hypothetical protein MUL_2554 |
M. vanbaalenii PYR-1 | Mvan_4060 | - | 2e-35 | 41.98% (162) | hypothetical protein Mvan_4060 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3646c|M.bovis_AF2122/97 -------------------------------------------------- Rv3616c|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00405|M.leprae_Br4923 -------------------------------------------------- MMAR_4166|M.marinum_M -------------------------------------------------- Mflv_1605|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4060|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5089|M.smegmatis_MC2_155 -------------------------------------------------- TH_4388|M.thermoresistible__bu -------------------------------------------------- MUL_2554|M.ulcerans_Agy99 MPAGLIAAAVRTIVNLGSFGQQFVGVNDPKFTNPEYLAASATGMASDGLT Mb3646c|M.bovis_AF2122/97 -----------------------------MSRAFIIDPTISAIDGLYDLL Rv3616c|M.tuberculosis_H37Rv -----------------------------MSRAFIIDPTISAIDGLYDLL MLBr_00405|M.leprae_Br4923 -----------------------------MSGAFIIDPTLKAIEAWHALL MMAR_4166|M.marinum_M -----------------------------MSRAFIIDPTISAINGLHALL Mflv_1605|M.gilvum_PYR-GCK --------------------------------MSVLGSFLTTWSQARATF Mvan_4060|M.vanbaalenii_PYR-1 --------------------------------MAVLDAFMAIWSKARGTF MSMEG_5089|M.smegmatis_MC2_155 --------------------------------MGALDGFYSTWNKARETF TH_4388|M.thermoresistible__bu --------------------------------MSALDAFFLTWRKARETY MUL_2554|M.ulcerans_Agy99 AVFGQTWVPQALAKRVGHSQLTSLASSKAAQGASAILWTINIVEVLETLM : Mb3646c|M.bovis_AF2122/97 GIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHV Rv3616c|M.tuberculosis_H37Rv GIGIPNQGGILYSSLEYFEKALEELAAAFPGDGWLGSAADKYAGKNRNHV MLBr_00405|M.leprae_Br4923 GIGVPNDGGVLYSSLSFFEKALEHLAAAFPGDGWLGSAADKYAGQNRKRV MMAR_4166|M.marinum_M GIGLPEDGGIIDSALSFFGKALDDLGSAFPGDGWLGSAADHYSGKNRKHV Mflv_1605|M.gilvum_PYR-GCK GDGVPLPGSTFDGSST-LRRLEAETRRAAPRSDWTGGAADTYAAGNAEHA Mvan_4060|M.vanbaalenii_PYR-1 GDGVPQDGSVYDASPA-LTRLQDEVRGAAPRETWTGSASDGYASANERHA MSMEG_5089|M.smegmatis_MC2_155 GQGAPTDGSQFDQSRS-LTQMKASVEAAAPDDRWQGSGANAYAAANKEHA TH_4388|M.thermoresistible__bu GVGTPQTGEQFDHSTT-FRELASRLESTAPGDKWTGTAADAYDAVNTEHR MUL_2554|M.ulcerans_Agy99 GFGPPAEGDELLVGSTQFAKAQAQLGSALPDNSWQGSASYAYASQNTALQ * * * * . : . : * . * * .: * . * Mb3646c|M.bovis_AF2122/97 NFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTY Rv3616c|M.tuberculosis_H37Rv NFFQELADLDRQLISLIHDQANAVQTTRDILEGAKKGLEFVRPVAVDLTY MLBr_00405|M.leprae_Br4923 DIFQELAELDKELIELIHNQANSVQTTRGILDGAKKALLFVRPVAIDLNY MMAR_4166|M.marinum_M NFFKELAELDRELQKLIADQASAVKTTREILEDAKKGLEFVRPVAVDLTY Mflv_1605|M.gilvum_PYR-GCK RALARMAELDERMGREVDRSAVVVRDGRVHLDSVKDWVLSAAASVPDNA- Mvan_4060|M.vanbaalenii_PYR-1 SVLGETALLDRRLRAEIDRSAEVVRAGRRELDAVRRRVSEAAAGVPPTP- MSMEG_5089|M.smegmatis_MC2_155 QVYQKLADLDQKMAAEVKNAANVVSAGRTNLDNAKSWVEGMANSLPATSQ TH_4388|M.thermoresistible__bu LVIGELANLDRRLGAQITRAAQIVTTGRNDLQTVHDTVAAIADRLPPGP- MUL_2554|M.ulcerans_Agy99 NRGQALAELDVKFAALVKDQAEWATHGRLGIAILKNLLLATFAVEMALMF * ** .: : * . * : : : Mb3646c|M.bovis_AF2122/97 IPVVGHALSAAFQAPFCAGAMAVVGGALAYLAVKTLINATQLLKLLAKLA Rv3616c|M.tuberculosis_H37Rv IPVVGHALSAAFQAPFCAGAMAVVGGALAYLVVKTLINATQLLKLLAKLA MLBr_00405|M.leprae_Br4923 IPLVGSVMSASIQAQACAAAMAAVSGGLAYLLVQTAIHTAKFVALLARLA MMAR_4166|M.marinum_M IPIVGWAMSAAFQAPVCAAAMAVVGGALAYLVVKTLINSMKLVSLLAQLA Mflv_1605|M.gilvum_PYR-GCK -AGERMLLPIVGKGCTDIADIVTSSNGQLATIAERIRSLGVEYAALDD-- Mvan_4060|M.vanbaalenii_PYR-1 -EGESMLYPAISRGSGEIVDIVQRSHTDLNMIAGRIEAIASEYQALGEGT MSMEG_5089|M.smegmatis_MC2_155 QDRERKLIPIAREGINRVDNIVKSATADMMGIKGNVEKLRGEYDTIKTTM TH_4388|M.thermoresistible__bu -SDDAMRYALVSQGTGKIIEIIRDSNTDLNAVGADLRALDSAYQELGN-- MUL_2554|M.ulcerans_Agy99 AVPAGPAMARSFGFTVSGLGIAIAMGLLSTVLTYSVENSKKADVLTANYQ . : Mb3646c|M.bovis_AF2122/97 ELVAAAIADIISDVADIIKG-------ILGEVWEFITNALNGLKELWDKL Rv3616c|M.tuberculosis_H37Rv ELVAAAIADIISDVADIIKG-------TLGEVWEFITNALNGLKELWDKL MLBr_00405|M.leprae_Br4923 HLLASAVADVVSDGVAIIKG-------IVDHLWHFIAGALTGLKDIVEKI MMAR_4166|M.marinum_M KLLAEAVADVVSDVVDIIKG-------ILEEVWEFLTHPFEFLKDLLNKL Mflv_1605|M.gilvum_PYR-GCK ----------AASVT------------PRSE---ATTSD----------- Mvan_4060|M.vanbaalenii_PYR-1 ELGVGDGAEPAGGAE------------PGDEPRLAVSNENEPWTYPFDPP MSMEG_5089|M.smegmatis_MC2_155 RFGPESEKKPGDKKDDAQMLGNEEKDDDGIPEMHAPSTEDQARMDVEQVL TH_4388|M.thermoresistible__bu -------QKFANGPK--------------------ESNT----------- MUL_2554|M.ulcerans_Agy99 DLTPDPYQGADPSMP------------------------------MAANM Mb3646c|M.bovis_AF2122/97 TGWVTGLFSRGWSNLESFFAGVPGLTGATSGLSQVTGLFGAAGLSASS-- Rv3616c|M.tuberculosis_H37Rv TGWVTGLFSRGWSNLESFFAGVPGLTGATSGLSQVTGLFGAAGLSASS-- MLBr_00405|M.leprae_Br4923 IHWFFGLFSHWWSRLHSFFGGIPGLSGATSGLSQVTGLFGVPGLAGSS-- MMAR_4166|M.marinum_M VSWASSLLSQWGSKLQSFFGGIPGLSGMGGGLSQLTSFFSSAGAAGSAG- Mflv_1605|M.gilvum_PYR-GCK ------------------------------LRRPTPRHR----------- Mvan_4060|M.vanbaalenii_PYR-1 APPDSAPGGGRWELGQAYPPGPGGGPPMGPIPAPKPWHRS---------- MSMEG_5089|M.smegmatis_MC2_155 SEGDGGAAERVDEVLSSIKPGDELTPQQDAYLSEMQRQQKGMSVEDLRAA TH_4388|M.thermoresistible__bu -------------------------------------------------- MUL_2554|M.ulcerans_Agy99 PASAESTISSFAASGTAFTAEAAGSLGRASGAADESAFYSAAADEAVP-- Mb3646c|M.bovis_AF2122/97 -------------------------------GLAHADSLASSASLPALAG Rv3616c|M.tuberculosis_H37Rv -------------------------------GLAHADSLASSASLPALAG MLBr_00405|M.leprae_Br4923 -------------------------------GLLSGESLLSTENLPSLAG MMAR_4166|M.marinum_M -----------------------------SVGAADSASLVSSAGLPGGLG Mflv_1605|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4060|M.vanbaalenii_PYR-1 ----------------------------IDPPVKGGGSGLEDVVTPPPNG MSMEG_5089|M.smegmatis_MC2_155 EQRLGDHKNVIADSWQLMSNDDVEYSAGAGDDKKGAASQLPDSVQKALTN TH_4388|M.thermoresistible__bu -------------------------------------------------- MUL_2554|M.ulcerans_Agy99 --------------------------------LEDAPSATSAFTMPTLAQ Mb3646c|M.bovis_AF2122/97 IGGGSGFGGLPSLAQVHAASTRQALRPRAD-------------------- Rv3616c|M.tuberculosis_H37Rv IGGGSGFGGLPSLAQVHAASTRQALRPRAD-------------------- MLBr_00405|M.leprae_Br4923 VGAGLGLGSLPQLAQLHAASTRQGTRSQAG-------------------- MMAR_4166|M.marinum_M LGGGSGFGSMPNVAQLRSAATRQDPRLTSE-------------------- Mflv_1605|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4060|M.vanbaalenii_PYR-1 VGVRPPL-----VLQESYEFRVTGEGFRDGDGHLR--------------- MSMEG_5089|M.smegmatis_MC2_155 AGDTWPIGDGIGQLRYEGDLKAISEIVKDGNPGFQTGTELDRQLIVAADK TH_4388|M.thermoresistible__bu -------------------------------------------------- MUL_2554|M.ulcerans_Agy99 LMAISGQGAKFSGHVSQHAN------------------------------ Mb3646c|M.bovis_AF2122/97 ----------------GPVGAAAEQVGGQSQLVS---------------- Rv3616c|M.tuberculosis_H37Rv ----------------GPVGAAAEQVGGQSQLVS---------------- MLBr_00405|M.leprae_Br4923 ----------------VSAELSTEQFGGQQEPVS---------------- MMAR_4166|M.marinum_M ----------------GPTRVSSEPVGEHAQAAS---------------- Mflv_1605|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4060|M.vanbaalenii_PYR-1 --------------WIQRDGSWYQAQWIDYELEANHLQ------------ MSMEG_5089|M.smegmatis_MC2_155 AMDARDIPGGQILGRESTVQSLFEAVDDDHQIINDHLMGRNGVDVDDFLR TH_4388|M.thermoresistible__bu -------------------------------------------------- MUL_2554|M.ulcerans_Agy99 --------------------LANQAMGQVQQVAS---------------- Mb3646c|M.bovis_AF2122/97 -------------------------------------------------- Rv3616c|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00405|M.leprae_Br4923 -------------------------------------------------- MMAR_4166|M.marinum_M -------------------------------------------------- Mflv_1605|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4060|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5089|M.smegmatis_MC2_155 DVNTTDWPDNGKAAGYLFSWTNEASSGPEAHIAAEVADKYAGYIGEHRTD TH_4388|M.thermoresistible__bu -------------------------------------------------- MUL_2554|M.ulcerans_Agy99 -------------------------------------------------- Mb3646c|M.bovis_AF2122/97 -------------AQGSQGMGGPVGMGGMHPSSGASKG--TTTKKYSEGA Rv3616c|M.tuberculosis_H37Rv -------------AQGSQGMGGPVGMGGMHPSSGASKG--TTTKKYSEGA MLBr_00405|M.leprae_Br4923 -------------AQGSQGMGGSQGMGGMTPASTKSKKDERKKKKYSEGA MMAR_4166|M.marinum_M -------------AQGGQGMGG------MHPASAGSKG--ATSKKYSEGA Mflv_1605|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4060|M.vanbaalenii_PYR-1 -----------------QLTGNVSVPLGDHTWEPIDIKDIYQLQVDNPRL MSMEG_5089|M.smegmatis_MC2_155 LMNFDGQTLGQRNPELVQQYAHGLVPFVDDMAGNNGSGGEFEIDTEKDRR TH_4388|M.thermoresistible__bu -------------------------------------------------- MUL_2554|M.ulcerans_Agy99 ---------------MAQQGKGTAPAEDTAQTEATTVEDVEGAGADSAGA Mb3646c|M.bovis_AF2122/97 AAGTEDAERAPVEADAGGGQKVLVRNVV---------------------- Rv3616c|M.tuberculosis_H37Rv AAGTEDAERAPVEADAGGGQKVLVRNVV---------------------- MLBr_00405|M.leprae_Br4923 AAGTDDAERAPIEVQSGGGKRALAQHVV---------------------- MMAR_4166|M.marinum_M AAGTEDAERAPVEVGVGAAARIAERRAG---------------------- Mflv_1605|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4060|M.vanbaalenii_PYR-1 TLYIPDPSGSVLELDPDRPAASGP-------------------------- MSMEG_5089|M.smegmatis_MC2_155 AGLMPNAKGVFSVLNTDPTAATTINSAAISQAMIAETAFAENPNDPLAHS TH_4388|M.thermoresistible__bu -------------------------------------------------- MUL_2554|M.ulcerans_Agy99 AAGRAPIEAAAADTPPAQQPIFAQQVV----------------------- Mb3646c|M.bovis_AF2122/97 -------------------------------------------------- Rv3616c|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00405|M.leprae_Br4923 -------------------------------------------------- MMAR_4166|M.marinum_M -------------------------------------------------- Mflv_1605|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4060|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5089|M.smegmatis_MC2_155 YLSSAATLRGLVDVGAHEAFQAFNENGYNAGVDETTWKKAGFDAAVTAFS TH_4388|M.thermoresistible__bu -------------------------------------------------- MUL_2554|M.ulcerans_Agy99 -------------------------------------------------- Mb3646c|M.bovis_AF2122/97 -------------------------------------------------- Rv3616c|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00405|M.leprae_Br4923 -------------------------------------------------- MMAR_4166|M.marinum_M -------------------------------------------------- Mflv_1605|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4060|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5089|M.smegmatis_MC2_155 TGSTFVPGVGVVASPVISQVGSIFSNEFFENPPGPVERPLPQLSEPVATT TH_4388|M.thermoresistible__bu -------------------------------------------------- MUL_2554|M.ulcerans_Agy99 -------------------------------------------------- Mb3646c|M.bovis_AF2122/97 -------------------------------------------------- Rv3616c|M.tuberculosis_H37Rv -------------------------------------------------- MLBr_00405|M.leprae_Br4923 -------------------------------------------------- MMAR_4166|M.marinum_M -------------------------------------------------- Mflv_1605|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_4060|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_5089|M.smegmatis_MC2_155 TLLNAMLAANQPLDLPPGYVVGNEVVQPPGVSDHEFAATLNAEIGRQTVT TH_4388|M.thermoresistible__bu -------------------------------------------------- MUL_2554|M.ulcerans_Agy99 -------------------------------------------------- Mb3646c|M.bovis_AF2122/97 ----------------------------------- Rv3616c|M.tuberculosis_H37Rv ----------------------------------- MLBr_00405|M.leprae_Br4923 ----------------------------------- MMAR_4166|M.marinum_M ----------------------------------- Mflv_1605|M.gilvum_PYR-GCK ----------------------------------- Mvan_4060|M.vanbaalenii_PYR-1 ----------------------------------- MSMEG_5089|M.smegmatis_MC2_155 VDGDGPDEIYADQYNLIIQDPDIQAPPTATRSENK TH_4388|M.thermoresistible__bu ----------------------------------- MUL_2554|M.ulcerans_Agy99 -----------------------------------