For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4199 | - | - | 100% (289) | protein of unknown function DUF140 |
| M. thermoresistible (build 8) | TH_0168 | - | e-110 | 67.64% (275) | TrnB2 protein |
| M. thermoresistible (build 8) | TH_4563 | - | e-104 | 69.77% (258) | PUTATIVE protein of unknown function DUF140 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3530c | yrbE4B | 3e-89 | 54.95% (273) | integral membrane protein YrbE4b |
| M. gilvum PYR-GCK | Mflv_2100 | - | 1e-111 | 69.01% (284) | hypothetical protein Mflv_2100 |
| M. tuberculosis H37Rv | Rv1965 | yrbE3B | 1e-108 | 71.21% (264) | integral membrane protein YrbE3b |
| M. leprae Br4923 | MLBr_02588 | yrbE1B | 2e-83 | 52.36% (275) | hypothetical protein MLBr_02588 |
| M. abscessus ATCC 19977 | MAB_4154c | - | 5e-88 | 55.64% (266) | hypothetical protein MAB_4154c |
| M. marinum M | MMAR_2881 | yrbE3B | 1e-111 | 68.90% (283) | integral membrane protein, YrbE3B |
| M. avium 104 | MAV_2060 | - | 1e-101 | 64.53% (265) | TrnB2 protein |
| M. smegmatis MC2 155 | MSMEG_0345 | - | 1e-120 | 82.06% (262) | hypothetical protein MSMEG_0345 |
| M. ulcerans Agy99 | MUL_3917 | yrbE3B_1 | 1e-110 | 69.49% (272) | integral membrane protein YrbE3B_1 |
| M. vanbaalenii PYR-1 | Mvan_3983 | - | 1e-127 | 79.58% (284) | hypothetical protein Mvan_3983 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3530c|M.bovis_AF2122/97 ----MS------YDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNA
MAB_4154c|M.abscessus_ATCC_199 ----MSGPYLSTHTVTSYTVRYMRGLGRSFDKFGEQALFYAQSLSYIPAA
TH_4199|M.thermoresistible__bu MAGVVTVG--GPSRPLPRLRNVWGGLVRAWNRIGRQTEFYWRTVVAVPDA
Mvan_3983|M.vanbaalenii_PYR-1 ----MSAS--APSKPLGRLHILVDDFAAGWNRIGAQMRFYAETLAAVPDA
MSMEG_0345|M.smegmatis_MC2_155 -----------MSNRLDRVR-------AAWDGIGVQTQFYARAIGSIGDA
Rv1965|M.tuberculosis_H37Rv ----MTA---------------AKALVSEWNRMGSQMRFFVGTLAGIPDA
MMAR_2881|M.marinum_M ----MTVS--ASRSSRHRLRRTAKSLVREWNRLGSQMRFYVTTLTGIPDA
Mflv_2100|M.gilvum_PYR-GCK ----MTVS--RPHSQFPWLKARFRSIADPWNQVGVQTKFYGRTLRSIVIA
MUL_3917|M.ulcerans_Agy99 ----MTAV--AAGSRWRGVRHKLDGWVAGWNQIGTQTKFFGRTLRSIHYM
MAV_2060|M.avium_104 ----MTEI--AREPS--RFAALGPRLVESTRKLGEQTVFYGQSLTAIADA
MLBr_02588|M.leprae_Br4923 -MSTAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNIPNA
.* * :: :
Mb3530c|M.bovis_AF2122/97 ITRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTLASGGVIAVQGYSS
MAB_4154c|M.abscessus_ATCC_199 LTKYRKETIRVLAEITMGTGALVMIGGTVGVAVFLTLASGGVIAVQGYSS
TH_4199|M.thermoresistible__bu LMHYRAELIRLIAGMGLGTGALAIVGGTVAIVGFLTITTGGLVAVQGYNQ
Mvan_3983|M.vanbaalenii_PYR-1 VVHYRTELLRLIAQMGLGSGALVVVGGTVAIVGFLTMTTGALVAVQGYNQ
MSMEG_0345|M.smegmatis_MC2_155 AMNYRTELIRLIATMGLGAGALAVVGGTVAIVGFLTMTTGALVAVQGYNQ
Rv1965|M.tuberculosis_H37Rv LMHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQ
MMAR_2881|M.marinum_M VMHYRSELLRVIAQMGFGAGTLAVIGGTVVIVGFLAMTTGAIVAVQGYNQ
Mflv_2100|M.gilvum_PYR-GCK VTRYRIELVRQIAQMGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYTD
MUL_3917|M.ulcerans_Agy99 LIHYRVELIRLIAQMGLGAGALMVIGGTVAIVGFLTVTTGALVAVQGYSD
MAV_2060|M.avium_104 IRRYPGELLRLIAEMGMGTGALAVIGGTVGIIGFLTLTTGALVAVQGYDT
MLBr_02588|M.leprae_Br4923 LSRYRKETLRLIAQIGMGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFAS
.* * :* :* : :*:*.: ::***. : *:::: ..::*:**:
Mb3530c|M.bovis_AF2122/97 LGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVSE
MAB_4154c|M.abscessus_ATCC_199 LGNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAGTTAQLGAMRVAE
TH_4199|M.thermoresistible__bu LASVGFEALTGFASAFFNVRLIVPGTTAVALSATIGAGATAQIGAMRINE
Mvan_3983|M.vanbaalenii_PYR-1 LASVGFEALTGFASAFFNVRLIVPGTTSVALSATIGAAATAQLGAMRINE
MSMEG_0345|M.smegmatis_MC2_155 FASVGVEALTGFASAFFNVRLIAPGTTAVALSATIGAGATAQLGAMRINE
Rv1965|M.tuberculosis_H37Rv FASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINE
MMAR_2881|M.marinum_M FASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGATAQLGAMRINE
Mflv_2100|M.gilvum_PYR-GCK FSEIGVEALTGFASAFFNVRLIAPATTAVALAATIGAGATAQLGAMRINE
MUL_3917|M.ulcerans_Agy99 FSELGVEALTGFASAFFNVRLIAPATTAIALSATIGAGATAQLGAMRIND
MAV_2060|M.avium_104 LSNIGVEALTGFLSAFLNVRMIAPCTAGLALAATIGAGATAQLGAMRINE
MLBr_02588|M.leprae_Br4923 LGAIGVEAFTGFFAALINVRIAAPVITGIVMAATVGAGATAELGAMRISE
:. :*.**:*** :*::*.* * . :.::**:**.:** :****: :
Mb3530c|M.bovis_AF2122/97 EIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFV
MAB_4154c|M.abscessus_ATCC_199 EIDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFFASRATTVMI
TH_4199|M.thermoresistible__bu EIDALEVIGIRSVTYLASTRVLAGVIVVVPLYCVAMIMAFLSARTGTTVI
Mvan_3983|M.vanbaalenii_PYR-1 EIDALEVIGIRSVTYLAATRVLAGVIVVIPLYCVAVMMAFLAARFGTTVI
MSMEG_0345|M.smegmatis_MC2_155 EIDALEVIGIRSVSYLASTRVAAGVIVVIPLYCVAVIMSFISSRLGTTVI
Rv1965|M.tuberculosis_H37Rv EIDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAI
MMAR_2881|M.marinum_M EIDALEVIGIRSVSYLASTRVLAGVVVAIPLFCVGLITAYLAARAGTTAI
Mflv_2100|M.gilvum_PYR-GCK EIDALEVMGIRSVAYLASTRVLAGLLVVIPLYCVGVLASFWAARFGTTVI
MUL_3917|M.ulcerans_Agy99 EIDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTTVL
MAV_2060|M.avium_104 EIDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKLLTIYV
MLBr_02588|M.leprae_Br4923 EIDALEVMSIKSISFLVTTRILAGLVVIVPLYAVAMIMAFLSPHIITTVL
****:* :.::::::*.::*: **::. :**:.:.:: :: :.: * :
Mb3530c|M.bovis_AF2122/97 NGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGS
MAB_4154c|M.abscessus_ATCC_199 NGQSPGVYDHYFNTFLVPTDLLWSFLQAIVMSVVVMLVHTSYGFNASGGP
TH_4199|M.thermoresistible__bu YGQGSGVYDHYFNTFLNPTDLIWSFFQVVALAVVIMLVHTFYGYTASGGP
Mvan_3983|M.vanbaalenii_PYR-1 YGQGSGVYDHYFGTFLSPTDLIWSFFQCVAMTVVIMLVHTYYGFTASGGP
MSMEG_0345|M.smegmatis_MC2_155 YGQGSGVYDHYFNTFLNTNDLLWSFGQSVAITVVIMLVHTYYGYTASGGP
Rv1965|M.tuberculosis_H37Rv YGQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGP
MMAR_2881|M.marinum_M YGQGSGVYDHYFNTFLRPTDVLWSSFEVVVVALMIMLVCTYYGYNAHGGP
Mflv_2100|M.gilvum_PYR-GCK YGQSTGVYDHYFRTFLNPTDLVWSFAQCIVLAIVIMLVHTYYGFSARGGP
MUL_3917|M.ulcerans_Agy99 YSQATGVYDHYFRTFLNPTDLVWSFVQCIALSLVIMLVHTYYGYTARGGP
MAV_2060|M.avium_104 YGQSKGVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGP
MLBr_02588|M.leprae_Br4923 YGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCYYGYTANGGP
.*. * *:*** *** . *:.** . : :: :*:. **: * **.
Mb3530c|M.bovis_AF2122/97 VGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
MAB_4154c|M.abscessus_ATCC_199 VGVGVAVGQAVRTSLIVVVLVTLFISLAVYGGSGNFNLSG
TH_4199|M.thermoresistible__bu AGVGEAVGRAVRTSMIVAAVVIIFISLAAYGQTGNFVLAG
Mvan_3983|M.vanbaalenii_PYR-1 AGVGEAVGRAVRTSMVVASVEIVMISLAVYGQSGNFNLAG
MSMEG_0345|M.smegmatis_MC2_155 AGVGEAVGRAVRTSLIVAAIVVVMISLALYGQSGNFHLAG
Rv1965|M.tuberculosis_H37Rv AGVGEAVGRAVRASMVVASIAILVMTLAIYGQSPNFHLAT
MMAR_2881|M.marinum_M AGVGEAVGRAVRASMVVASIAIVIMTLAIYGQSPNFHLAS
Mflv_2100|M.gilvum_PYR-GCK AGVGEAVGRAVRTSLILSAFVLVMISLAVYGQSGNFNLAG
MUL_3917|M.ulcerans_Agy99 AGVGEAVGRAVRTSLIFSAFVLVMISLAVYGQSGNFNLAG
MAV_2060|M.avium_104 AGVGEAVGRSVRSSMIVTAFVCLMISLSVYGQSGNFNLSG
MLBr_02588|M.leprae_Br4923 VGVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV
.*** ***:::* *:: . : :*: ** ** *: