For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4563 | - | - | 100% (259) | protein of unknown function DUF140 |
| M. thermoresistible (build 8) | TH_0168 | - | e-117 | 79.46% (258) | TrnB2 protein |
| M. thermoresistible (build 8) | TH_4199 | - | e-104 | 69.77% (258) | PUTATIVE protein of unknown function DUF140 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3530c | yrbE4B | 4e-92 | 61.87% (257) | integral membrane protein YrbE4b |
| M. gilvum PYR-GCK | Mflv_2100 | - | 1e-105 | 72.09% (258) | hypothetical protein Mflv_2100 |
| M. tuberculosis H37Rv | Rv1965 | yrbE3B | 1e-94 | 64.59% (257) | integral membrane protein YrbE3b |
| M. leprae Br4923 | MLBr_02588 | yrbE1B | 2e-80 | 54.30% (256) | hypothetical protein MLBr_02588 |
| M. abscessus ATCC 19977 | MAB_4154c | - | 7e-89 | 61.09% (257) | hypothetical protein MAB_4154c |
| M. marinum M | MMAR_4050 | yrbE3B_1 | 1e-104 | 69.77% (258) | integral membrane protein YrbE3B_1 |
| M. avium 104 | MAV_2060 | - | 1e-98 | 65.89% (258) | TrnB2 protein |
| M. smegmatis MC2 155 | MSMEG_0345 | - | 1e-103 | 70.54% (258) | hypothetical protein MSMEG_0345 |
| M. ulcerans Agy99 | MUL_3917 | yrbE3B_1 | 1e-104 | 69.77% (258) | integral membrane protein YrbE3B_1 |
| M. vanbaalenii PYR-1 | Mvan_4605 | - | 1e-107 | 72.87% (258) | hypothetical protein Mvan_4605 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3530c|M.bovis_AF2122/97 ---MS------YDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAI
MAB_4154c|M.abscessus_ATCC_199 ---MSGPYLSTHTVTSYTVRYMRGLGRSFDKFGEQALFYAQSLSYIPAAL
Mflv_2100|M.gilvum_PYR-GCK -----MTVSRPHSQFPWLKARFRSIADPWNQVGVQTKFYGRTLRSIVIAV
Mvan_4605|M.vanbaalenii_PYR-1 -----MTVSRPHSQFPWLKSQFARVADPWNHIGTQTKFYGRTLRSVGYVF
MMAR_4050|M.marinum_M -----MTAVAAGSRWRGVRHKLDGWVAGWNQIGTQTKFFGRTLRSIHYML
MUL_3917|M.ulcerans_Agy99 -----MTAVAAGSRWRGVRHKLDGWVAGWNQIGTQTKFFGRTLRSIHYML
MSMEG_0345|M.smegmatis_MC2_155 -----------------MSNRLDRVRAAWDGIGVQTQFYARAIGSIGDAA
Rv1965|M.tuberculosis_H37Rv ------------------MTAAKALVSEWNRMGSQMRFFVGTLAGIPDAL
TH_4563|M.thermoresistible__bu -------------------------------VGEQAQFYFATLRSTGGAL
MAV_2060|M.avium_104 -------MTEIAREPSRFAALGPRLVESTRKLGEQTVFYGQSLTAIADAI
MLBr_02588|M.leprae_Br4923 MSTAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNIPNAL
.* * ::
Mb3530c|M.bovis_AF2122/97 TRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTLASGGVIAVQGYSSL
MAB_4154c|M.abscessus_ATCC_199 TKYRKETIRVLAEITMGTGALVMIGGTVGVAVFLTLASGGVIAVQGYSSL
Mflv_2100|M.gilvum_PYR-GCK TRYRIELVRQIAQMGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYTDF
Mvan_4605|M.vanbaalenii_PYR-1 THYGVELIRIIAQMGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYSDF
MMAR_4050|M.marinum_M IHYRVELIRLIAQMGLGAGALMVIGGTVAIVGFLTVTTGALVAVQGYSDF
MUL_3917|M.ulcerans_Agy99 IHYRVELIRLIAQMGLGAGALMVIGGTVAIVGFLTVTTGALVAVQGYSDF
MSMEG_0345|M.smegmatis_MC2_155 MNYRTELIRLIATMGLGAGALAVVGGTVAIVGFLTMTTGALVAVQGYNQF
Rv1965|M.tuberculosis_H37Rv MHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQF
TH_4563|M.thermoresistible__bu VHYKAEVVRLIAQMSLGTGALAMIGGTVAVVGFLTMSTGVLIAVQGYNQF
MAV_2060|M.avium_104 RRYPGELLRLIAEMGMGTGALAVIGGTVGIIGFLTLTTGALVAVQGYDTL
MLBr_02588|M.leprae_Br4923 SRYRKETLRLIAQIGMGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASL
.* * :* :* : :*:*.: ::***..: *:::: . ::*:**: :
Mb3530c|M.bovis_AF2122/97 GDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVSEE
MAB_4154c|M.abscessus_ATCC_199 GNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAGTTAQLGAMRVAEE
Mflv_2100|M.gilvum_PYR-GCK SEIGVEALTGFASAFFNVRLIAPATTAVALAATIGAGATAQLGAMRINEE
Mvan_4605|M.vanbaalenii_PYR-1 SELGVEALTGFVSAYFNVRLIAPATTAIALSATIGAGATAQLGAMRINEE
MMAR_4050|M.marinum_M SELGVEALTGFASAFFNVRLIAPATTAIALSATIGAGATAQLGAMRINDE
MUL_3917|M.ulcerans_Agy99 SELGVEALTGFASAFFNVRLIAPATTAIALSATIGAGATAQLGAMRINDE
MSMEG_0345|M.smegmatis_MC2_155 ASVGVEALTGFASAFFNVRLIAPGTTAVALSATIGAGATAQLGAMRINEE
Rv1965|M.tuberculosis_H37Rv ASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEE
TH_4563|M.thermoresistible__bu ADIGVEALTGFLSAYLNVRNIAPLTAGIALAATIGAGATAQLGAMRISEE
MAV_2060|M.avium_104 SNIGVEALTGFLSAFLNVRMIAPCTAGLALAATIGAGATAQLGAMRINEE
MLBr_02588|M.leprae_Br4923 GAIGVEAFTGFFAALINVRIAAPVITGIVMAATVGAGATAELGAMRISEE
. :*:**:*** :* :*.* * . :.::**:***:** *****: :*
Mb3530c|M.bovis_AF2122/97 IDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFVN
MAB_4154c|M.abscessus_ATCC_199 IDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFFASRATTVMIN
Mflv_2100|M.gilvum_PYR-GCK IDALEVMGIRSVAYLASTRVLAGLLVVIPLYCVGVLASFWAARFGTTVIY
Mvan_4605|M.vanbaalenii_PYR-1 IDALEVMGIRSIAFLASSRVIAGFLVVIPLYCVGVLMAFWAARFGTTVIY
MMAR_4050|M.marinum_M IDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTTVLY
MUL_3917|M.ulcerans_Agy99 IDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTTVLY
MSMEG_0345|M.smegmatis_MC2_155 IDALEVIGIRSVSYLASTRVAAGVIVVIPLYCVAVIMSFISSRLGTTVIY
Rv1965|M.tuberculosis_H37Rv IDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIY
TH_4563|M.thermoresistible__bu IDALEVMGIRSIAYLASSRVVAGVLVVIPLYCVAVIMAFGAARFGTTTIY
MAV_2060|M.avium_104 IDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKLLTIYVY
MLBr_02588|M.leprae_Br4923 IDALEVMSIKSISFLVTTRILAGLVVIVPLYAVAMIMAFLSPHIITTVLY
***:* :.::::::*.::*: **.:. :**:.:.:: :: :.: * :
Mb3530c|M.bovis_AF2122/97 GQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSV
MAB_4154c|M.abscessus_ATCC_199 GQSPGVYDHYFNTFLVPTDLLWSFLQAIVMSVVVMLVHTSYGFNASGGPV
Mflv_2100|M.gilvum_PYR-GCK GQSTGVYDHYFRTFLNPTDLVWSFAQCIVLAIVIMLVHTYYGFSARGGPA
Mvan_4605|M.vanbaalenii_PYR-1 GQSTGVYDHYFKTFLNPTDLMWSFGQCIALSVIIMLVHTYYGYTARGGPA
MMAR_4050|M.marinum_M SQATGVYDHYFRTFLNPTDLVWSFVQCIALSLVIMLVHTYYGYTARGGPA
MUL_3917|M.ulcerans_Agy99 SQATGVYDHYFRTFLNPTDLVWSFVQCIALSLVIMLVHTYYGYTARGGPA
MSMEG_0345|M.smegmatis_MC2_155 GQGSGVYDHYFNTFLNTNDLLWSFGQSVAITVVIMLVHTYYGYTASGGPA
Rv1965|M.tuberculosis_H37Rv GQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPA
TH_4563|M.thermoresistible__bu GQSTGVYDHYFETFLRPTDVIWSFFLALTMAVVIMLVHTYYGYHASGGPA
MAV_2060|M.avium_104 GQSKGVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPA
MLBr_02588|M.leprae_Br4923 GQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCYYGYTANGGPV
.*. * *:*** *** . *:.** : :: :*:. **: * **..
Mb3530c|M.bovis_AF2122/97 GVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
MAB_4154c|M.abscessus_ATCC_199 GVGVAVGQAVRTSLIVVVLVTLFISLAVYGGSGNFNLSG
Mflv_2100|M.gilvum_PYR-GCK GVGEAVGRAVRTSLILSAFVLVMISLAVYGQSGNFNLAG
Mvan_4605|M.vanbaalenii_PYR-1 GVGEAVGRAVRTSLIVSAFVLVMLSLAVYGQSGNFNLAG
MMAR_4050|M.marinum_M GVGEAVGRAVRTSLIFSAFVLVMISLAVYGQSGNFNLAG
MUL_3917|M.ulcerans_Agy99 GVGEAVGRAVRTSLIFSAFVLVMISLAVYGQSGNFNLAG
MSMEG_0345|M.smegmatis_MC2_155 GVGEAVGRAVRTSLIVAAIVVVMISLALYGQSGNFHLAG
Rv1965|M.tuberculosis_H37Rv GVGEAVGRAVRASMVVASIAILVMTLAIYGQSPNFHLAT
TH_4563|M.thermoresistible__bu GVGDAVGRAVRTSLISASFVVVFVSLAIYGQSGSFQMAG
MAV_2060|M.avium_104 GVGEAVGRSVRSSMIVTAFVCLMISLSVYGQSGNFNLSG
MLBr_02588|M.leprae_Br4923 GVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV
*** ***:::* *:: . : :*::** . .* ::