For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SASAPSKPLGRLHILVDDFAAGWNRIGAQMRFYAETLAAVPDAVVHYRTELLRLIAQMGLGSGALVVVGG TVAIVGFLTMTTGALVAVQGYNQLASVGFEALTGFASAFFNVRLIVPGTTSVALSATIGAAATAQLGAMR INEEIDALEVIGIRSVTYLAATRVLAGVIVVIPLYCVAVMMAFLAARFGTTVIYGQGSGVYDHYFGTFLS PTDLIWSFFQCVAMTVVIMLVHTYYGFTASGGPAGVGEAVGRAVRTSMVVASVEIVMISLAVYGQSGNFN LAG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_3983 | - | - | 100% (284) | hypothetical protein Mvan_3983 |
M. vanbaalenii PYR-1 | Mvan_0362 | - | e-132 | 84.51% (284) | hypothetical protein Mvan_0362 |
M. vanbaalenii PYR-1 | Mvan_4605 | - | e-113 | 70.07% (284) | hypothetical protein Mvan_4605 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3530c | yrbE4B | 4e-90 | 57.14% (273) | integral membrane protein YrbE4b |
M. gilvum PYR-GCK | Mflv_2100 | - | 1e-114 | 70.77% (284) | hypothetical protein Mflv_2100 |
M. tuberculosis H37Rv | Rv1965 | yrbE3B | 1e-110 | 73.46% (260) | integral membrane protein YrbE3b |
M. leprae Br4923 | MLBr_02588 | yrbE1B | 4e-81 | 53.44% (262) | hypothetical protein MLBr_02588 |
M. abscessus ATCC 19977 | MAB_4154c | - | 3e-87 | 56.32% (261) | hypothetical protein MAB_4154c |
M. marinum M | MMAR_4050 | yrbE3B_1 | 1e-114 | 70.32% (283) | integral membrane protein YrbE3B_1 |
M. avium 104 | MAV_2060 | - | 1e-102 | 67.57% (259) | TrnB2 protein |
M. smegmatis MC2 155 | MSMEG_0345 | - | 1e-120 | 79.48% (268) | hypothetical protein MSMEG_0345 |
M. thermoresistible (build 8) | TH_4199 | - | 1e-127 | 79.58% (284) | PUTATIVE protein of unknown function DUF140 |
M. ulcerans Agy99 | MUL_3917 | yrbE3B_1 | 1e-114 | 70.32% (283) | integral membrane protein YrbE3B_1 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3530c|M.bovis_AF2122/97 ---MS------YDVTIRFRRFFSRLQRPVDNFGEQALFYGETMRYVPNAI MAB_4154c|M.abscessus_ATCC_199 ---MSGPYLSTHTVTSYTVRYMRGLGRSFDKFGEQALFYAQSLSYIPAAL MSMEG_0345|M.smegmatis_MC2_155 ----------MSNRLDRVR-------AAWDGIGVQTQFYARAIGSIGDAA TH_4199|M.thermoresistible__bu -MAGVVTVGGPSRPLPRLRNVWGGLVRAWNRIGRQTEFYWRTVVAVPDAL Mvan_3983|M.vanbaalenii_PYR-1 -----MSASAPSKPLGRLHILVDDFAAGWNRIGAQMRFYAETLAAVPDAV Rv1965|M.tuberculosis_H37Rv ----------MTAAKALVS--------EWNRMGSQMRFFVGTLAGIPDAL MMAR_4050|M.marinum_M -----MTAVAAGSRWRGVRHKLDGWVAGWNQIGTQTKFFGRTLRSIHYML MUL_3917|M.ulcerans_Agy99 -----MTAVAAGSRWRGVRHKLDGWVAGWNQIGTQTKFFGRTLRSIHYML Mflv_2100|M.gilvum_PYR-GCK -----MTVSRPHSQFPWLKARFRSIADPWNQVGVQTKFYGRTLRSIVIAV MAV_2060|M.avium_104 -------MTEIAREPSRFAALGPRLVESTRKLGEQTVFYGQSLTAIADAI MLBr_02588|M.leprae_Br4923 MSTAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNIPNAL .* * :: : Mb3530c|M.bovis_AF2122/97 TRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTLASGGVIAVQGYSSL MAB_4154c|M.abscessus_ATCC_199 TKYRKETIRVLAEITMGTGALVMIGGTVGVAVFLTLASGGVIAVQGYSSL MSMEG_0345|M.smegmatis_MC2_155 MNYRTELIRLIATMGLGAGALAVVGGTVAIVGFLTMTTGALVAVQGYNQF TH_4199|M.thermoresistible__bu MHYRAELIRLIAGMGLGTGALAIVGGTVAIVGFLTITTGGLVAVQGYNQL Mvan_3983|M.vanbaalenii_PYR-1 VHYRTELLRLIAQMGLGSGALVVVGGTVAIVGFLTMTTGALVAVQGYNQL Rv1965|M.tuberculosis_H37Rv MHYRGELLRVIAQMGLGTGVLAVIGGTVAIVGFLAMTTGAIVAVQGYNQF MMAR_4050|M.marinum_M IHYRVELIRLIAQMGLGAGALMVIGGTVAIVGFLTVTTGALVAVQGYSDF MUL_3917|M.ulcerans_Agy99 IHYRVELIRLIAQMGLGAGALMVIGGTVAIVGFLTVTTGALVAVQGYSDF Mflv_2100|M.gilvum_PYR-GCK TRYRIELVRQIAQMGLGAGALIVIGGTVAIVGFLTVTTGALVAVQGYTDF MAV_2060|M.avium_104 RRYPGELLRLIAEMGMGTGALAVIGGTVGIIGFLTLTTGALVAVQGYDTL MLBr_02588|M.leprae_Br4923 SRYRKETLRLIAQIGMGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASL .* * :* :* : :*:*.: ::***..: *:::: ..::*:**: : Mb3530c|M.bovis_AF2122/97 GDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVSEE MAB_4154c|M.abscessus_ATCC_199 GNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAGTTAQLGAMRVAEE MSMEG_0345|M.smegmatis_MC2_155 ASVGVEALTGFASAFFNVRLIAPGTTAVALSATIGAGATAQLGAMRINEE TH_4199|M.thermoresistible__bu ASVGFEALTGFASAFFNVRLIVPGTTAVALSATIGAGATAQIGAMRINEE Mvan_3983|M.vanbaalenii_PYR-1 ASVGFEALTGFASAFFNVRLIVPGTTSVALSATIGAAATAQLGAMRINEE Rv1965|M.tuberculosis_H37Rv ASVGVEALTGFASAFFNTREIQPGTVMVALAATVGAGTTAALGAMRINEE MMAR_4050|M.marinum_M SELGVEALTGFASAFFNVRLIAPATTAIALSATIGAGATAQLGAMRINDE MUL_3917|M.ulcerans_Agy99 SELGVEALTGFASAFFNVRLIAPATTAIALSATIGAGATAQLGAMRINDE Mflv_2100|M.gilvum_PYR-GCK SEIGVEALTGFASAFFNVRLIAPATTAVALAATIGAGATAQLGAMRINEE MAV_2060|M.avium_104 SNIGVEALTGFLSAFLNVRMIAPCTAGLALAATIGAGATAQLGAMRINEE MLBr_02588|M.leprae_Br4923 GAIGVEAFTGFFAALINVRIAAPVITGIVMAATVGAGATAELGAMRISEE . :*.**:*** :*::*.* * . :.::**:**.:** :****: :* Mb3530c|M.bovis_AF2122/97 IDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVFVN MAB_4154c|M.abscessus_ATCC_199 IDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFFASRATTVMIN MSMEG_0345|M.smegmatis_MC2_155 IDALEVIGIRSVSYLASTRVAAGVIVVIPLYCVAVIMSFISSRLGTTVIY TH_4199|M.thermoresistible__bu IDALEVIGIRSVTYLASTRVLAGVIVVVPLYCVAMIMAFLSARTGTTVIY Mvan_3983|M.vanbaalenii_PYR-1 IDALEVIGIRSVTYLAATRVLAGVIVVIPLYCVAVMMAFLAARFGTTVIY Rv1965|M.tuberculosis_H37Rv IDALEVIGIRSISYLASTRVLAGVVVAVPLFCVGLMTAYLAARVGTTAIY MMAR_4050|M.marinum_M IDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTTVLY MUL_3917|M.ulcerans_Agy99 IDALEVMGIRTIAFLAASRVVAGLLVVIPLYCVGVLASFWAARFGTTVLY Mflv_2100|M.gilvum_PYR-GCK IDALEVMGIRSVAYLASTRVLAGLLVVIPLYCVGVLASFWAARFGTTVIY MAV_2060|M.avium_104 IDALEVMGIRAVTYLASTRIIAGILVVIPLYAVAVLMSFIAAKLLTIYVY MLBr_02588|M.leprae_Br4923 IDALEVMSIKSISFLVTTRILAGLVVIVPLYAVAMIMAFLSPHIITTVLY ***:* :.::::::*.::*: **::. :**:.:.:: :: :.: * : Mb3530c|M.bovis_AF2122/97 GQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGGSV MAB_4154c|M.abscessus_ATCC_199 GQSPGVYDHYFNTFLVPTDLLWSFLQAIVMSVVVMLVHTSYGFNASGGPV MSMEG_0345|M.smegmatis_MC2_155 GQGSGVYDHYFNTFLNTNDLLWSFGQSVAITVVIMLVHTYYGYTASGGPA TH_4199|M.thermoresistible__bu GQGSGVYDHYFNTFLNPTDLIWSFFQVVALAVVIMLVHTFYGYTASGGPA Mvan_3983|M.vanbaalenii_PYR-1 GQGSGVYDHYFGTFLSPTDLIWSFFQCVAMTVVIMLVHTYYGFTASGGPA Rv1965|M.tuberculosis_H37Rv GQGSGVYDHYFNTFLRPTDVLWSSVEVVVVALMIMLVCTYYGYAAHGGPA MMAR_4050|M.marinum_M SQATGVYDHYFRTFLNPTDLVWSFVQCIALSLVIMLVHTYYGYTARGGPA MUL_3917|M.ulcerans_Agy99 SQATGVYDHYFRTFLNPTDLVWSFVQCIALSLVIMLVHTYYGYTARGGPA Mflv_2100|M.gilvum_PYR-GCK GQSTGVYDHYFRTFLNPTDLVWSFAQCIVLAIVIMLVHTYYGFSARGGPA MAV_2060|M.avium_104 GQSKGVYEHYFSTFLRPNDLLWSFFSALAMATGVMVVHTYYGFTATGGPA MLBr_02588|M.leprae_Br4923 GQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCYYGYTANGGPV .*. * *:*** *** . *:.** . : :: :*:. **: * **.. Mb3530c|M.bovis_AF2122/97 GVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG MAB_4154c|M.abscessus_ATCC_199 GVGVAVGQAVRTSLIVVVLVTLFISLAVYGGSGNFNLSG MSMEG_0345|M.smegmatis_MC2_155 GVGEAVGRAVRTSLIVAAIVVVMISLALYGQSGNFHLAG TH_4199|M.thermoresistible__bu GVGEAVGRAVRTSMIVAAVVIIFISLAAYGQTGNFVLAG Mvan_3983|M.vanbaalenii_PYR-1 GVGEAVGRAVRTSMVVASVEIVMISLAVYGQSGNFNLAG Rv1965|M.tuberculosis_H37Rv GVGEAVGRAVRASMVVASIAILVMTLAIYGQSPNFHLAT MMAR_4050|M.marinum_M GVGEAVGRAVRTSLIFSAFVLVMISLAVYGQSGNFNLAG MUL_3917|M.ulcerans_Agy99 GVGEAVGRAVRTSLIFSAFVLVMISLAVYGQSGNFNLAG Mflv_2100|M.gilvum_PYR-GCK GVGEAVGRAVRTSLILSAFVLVMISLAVYGQSGNFNLAG MAV_2060|M.avium_104 GVGEAVGRSVRSSMIVTAFVCLMISLSVYGQSGNFNLSG MLBr_02588|M.leprae_Br4923 GVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV *** ***:::* *:: . : :*: ** ** *: