For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4152 | - | - | 100% (512) | extracellular solute-binding protein, family 5 |
| M. thermoresistible (build 8) | TH_2965 | - | 1e-27 | 28.31% (491) | PUTATIVE extracellular solute-binding protein, family 5 |
| M. thermoresistible (build 8) | TH_0742 | oppA | 6e-22 | 24.21% (409) | PROBABLE PERIPLASMIC OLIGOPEPTIDE-BINDING LIPOPROTEIN OPPA |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1311c | oppA | 7e-21 | 24.34% (419) | periplasmic oligopeptide-binding lipoprotein OppA |
| M. gilvum PYR-GCK | Mflv_2761 | - | 0.0 | 74.46% (505) | extracellular solute-binding protein |
| M. tuberculosis H37Rv | Rv1280c | oppA | 7e-21 | 24.34% (419) | periplasmic oligopeptide-binding lipoprotein OppA |
| M. leprae Br4923 | MLBr_01121 | - | 3e-17 | 22.22% (405) | putative extracellular solute-binding dependent transport |
| M. abscessus ATCC 19977 | MAB_0426 | - | 1e-18 | 22.69% (498) | peptide ABC transporter DppA |
| M. marinum M | MMAR_5154 | dppA | 2e-17 | 24.86% (527) | periplasmic dipeptide-binding lipoprotein DppA |
| M. avium 104 | MAV_0464 | - | 3e-20 | 25.42% (531) | extracellular solute-binding protein, family protein 5 |
| M. smegmatis MC2 155 | MSMEG_4354 | - | 0.0 | 75.25% (501) | dipeptide-binding protein of ABC transport system |
| M. ulcerans Agy99 | MUL_4240 | dppA | 1e-17 | 24.42% (520) | periplasmic dipeptide-binding lipoprotein DppA |
| M. vanbaalenii PYR-1 | Mvan_3773 | - | 0.0 | 73.16% (503) | extracellular solute-binding protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1311c|M.bovis_AF2122/97 ------------MADRGQRRGCAPGIASALRASFQGKSRPWTQTRYWAFA
Rv1280c|M.tuberculosis_H37Rv ------------MADRGQRRGCAPGIASALRASFQGKSRPWTQTRYWAFA
MLBr_01121|M.leprae_Br4923 ------------MIMLSR-------IVAAL--------------------
Mflv_2761|M.gilvum_PYR-GCK -----------------------------------------MARTAVGAA
Mvan_3773|M.vanbaalenii_PYR-1 ----------------------------------------------MRTV
MSMEG_4354|M.smegmatis_MC2_155 ---------------------------------------------MAGMA
TH_4152|M.thermoresistible__bu -------------------------------------------------V
MMAR_5154|M.marinum_M ----------------------------------------------MRRM
MUL_4240|M.ulcerans_Agy99 MPLMAWGERRRDIANAPIAIRTAPMTMSRVPGALLGGAAGGSMVAVMRRM
MAV_0464|M.avium_104 -------------------------------------------------M
MAB_0426|M.abscessus_ATCC_1997 -----------------------------------------------MRL
Mb1311c|M.bovis_AF2122/97 LLTPLVVAMVLTGCSASGTQLELAPTADRRAAVGTTSDINQQDPATLQDG
Rv1280c|M.tuberculosis_H37Rv LLTPLVVAMVLTGCSASGTQLELAPTADRRAAVGTTSDINQQDPATLQDG
MLBr_01121|M.leprae_Br4923 ----LVVGLILTGCSASN---RLVPSAASNAALGKTSDINPQDPATLKDG
Mflv_2761|M.gilvum_PYR-GCK VLAVCALVLSLTGCNTGE-RVDLGDGAGGALIAAIAGEPDQLDPHKT---
Mvan_3773|M.vanbaalenii_PYR-1 VLATCVFLAALTGCSPGD-RVDLGAGAADALIAAIAGEPDQLDPHKT---
MSMEG_4354|M.smegmatis_MC2_155 TAWLAALVLVFTACSTGE-RVDLGDEASGNLIAAIAGEPDQLDPQKT---
TH_4152|M.thermoresistible__bu SNLVAVLLIAATGCAPGQ-RVDLGD-LSGNLIAAIAGEPDQLDPHKT---
MMAR_5154|M.marinum_M RATLAVVAVLLAVSPVAACGGGVLS--PDLVLVNGGEPPNPLIPTGT---
MUL_4240|M.ulcerans_Agy99 RATLAVVAVLLAVSPVAACGGGVLS--PDLVLVNGGEPPNPLIPTGT---
MAV_0464|M.avium_104 AVLATAAAALLVVASLAGCGGGVLS--PDLVVVNGGEPPNPLVPTGT---
MAB_0426|M.abscessus_ATCC_1997 RRLAIVLLVGIVAVLPAGCGDLVTPAPPGYFSMYITEPEHTLVPGNT---
. . . : . *
Mb1311c|M.bovis_AF2122/97 GNLRLSLTDFPPNFNILHIDGNNAEVAAMMKATLPRAFIIGPDGSTTVDT
Rv1280c|M.tuberculosis_H37Rv GNLRLSLTDFPPNFNILHIDGNNAEVAAMMKATLPRAFIIGPDGSTTVDT
MLBr_01121|M.leprae_Br4923 GNLRLALTDFPANFNILHIDGNNAEVTSMMKATMPRAFIIGTDGSTTVDT
Mflv_2761|M.gilvum_PYR-GCK -TAYFSFEVLENVFDTLVE----PDQDLQMKPALAESWEVSPD-------
Mvan_3773|M.vanbaalenii_PYR-1 -TSYFSFEVLENVFDTLVE----PDGNLQMQPALARAWEVSPD-------
MSMEG_4354|M.smegmatis_MC2_155 -SAYFSFEVLENVFDTLVE----PDENLQMQPALAESWEVSPD-------
TH_4152|M.thermoresistible__bu -SAYFSFQVLENVFDTLVE----PDEDLRMRPALAESWQVSAD-------
MMAR_5154|M.marinum_M -NDSYGGRIIDRLFAGLVSYD----AKGKPSLEVAQSIDTTDN-------
MUL_4240|M.ulcerans_Agy99 -NDSYGGRIIDRLFAGLVSYD----AKGKPSLEVAQSIDTTDN-------
MAV_0464|M.avium_104 -NDSQGGRILDRLFAGLMSYD----AAGNPAPEVAQSIESGDN-------
MAB_0426|M.abscessus_ATCC_1997 -TENQGGRILRSLFTALVEFNN--ETAAVEYTGVAESITSHDN-------
. . : * * :..: :
Mb1311c|M.bovis_AF2122/97 NYFTSIELTRTAPQVVTYTINPEAVWSDGTPITWRDIASQIHA----ISG
Rv1280c|M.tuberculosis_H37Rv NYFTSIELTRTAPQVVTYTINPEAVWSDGTPITWRDIASQIHA----ISG
MLBr_01121|M.leprae_Br4923 NYFTSIKLTSTSPQVVTYTINPKAVWSDGTPITWRDIDRQIHA----NSG
Mflv_2761|M.gilvum_PYR-GCK ------------QLTWTFRLRPGVTFHDGTPLAAEDVVFSYRR----IID
Mvan_3773|M.vanbaalenii_PYR-1 ------------QLTWTFHLRPGVTFHDGTPLTADDVVFSYRR----IID
MSMEG_4354|M.smegmatis_MC2_155 ------------QLTWTFHLRDGVRWHDGTPLTADDVVYSYRR----IID
TH_4152|M.thermoresistible__bu ------------QRVWTFRLRPGVTFHDGSPLTADDVVFSYRR----IID
MMAR_5154|M.marinum_M -------------VNYRILLKPGWRFTDGSPVTAHSFVDAWNYGALSTNA
MUL_4240|M.ulcerans_Agy99 -------------VNYRILLKPGWGFTDGSPVTAHSFVDAWNYGALSTNA
MAV_0464|M.avium_104 -------------VNYRIVLKPGWRFTDGSPVTAHSFVDAWNYGALSTNA
MAB_0426|M.abscessus_ATCC_1997 -------------VNWTIKLKPGWTFHNGEPVTAQSYVDAWNYTALSTNA
:. : :* *:: . .
Mb1311c|M.bovis_AF2122/97 ADKAFEIASSSGAERVASVTRGVDDR--------------QAVVTFAKPY
Rv1280c|M.tuberculosis_H37Rv ADKAFEIASSSGAERVASVTRGVDDR--------------QAVVTFAKPY
MLBr_01121|M.leprae_Br4923 KNKAFEIAGTNGCERVASIRPGANDR--------------QAIVTFAQPY
Mflv_2761|M.gilvum_PYR-GCK EQ----LANSDKFSSVQAVE-APDPS--------------TVVIRVDRPT
Mvan_3773|M.vanbaalenii_PYR-1 EQ----LANSDKFSSVAAVD-APDPN--------------TVVIRVDRPT
MSMEG_4354|M.smegmatis_MC2_155 EQ----LTNVDKFSAVTDVS-APDPA--------------TVRIVVSHPT
TH_4152|M.thermoresistible__bu EH----LTNVDRLSAVTEVT-AVDPL--------------TVRITVARPT
MMAR_5154|M.marinum_M QLQQHFFSPIEGYEEVAGEPGEGKP---TTMSGLHVVNNREFTVRLRAPT
MUL_4240|M.ulcerans_Agy99 QLQQHFFSPIEGYEEVAGEPGEGKP---TTMSGLHVVNNREFTVRLRAPT
MAV_0464|M.avium_104 QLQQSFFSPIDGYDALAA--GQPQQ---TTMTGLRVVNDLEFTVRLKAPT
MAB_0426|M.abscessus_ATCC_1997 QGSSSFLANVDGFDDLQGDPAHKIAPRATQMRGLHVVDDVTFTVRLNTPF
:: . . : : . *
Mb1311c|M.bovis_AF2122/97 AEWRGMFAGNGMLLPASMTATPEAFNKGQLDGPGPSAGPFVVSALD----
Rv1280c|M.tuberculosis_H37Rv AEWRGMFAGNGMLLPASMTATPEAFNKGQLDGPGPSAGPFVVSALD----
MLBr_01121|M.leprae_Br4923 AEWRGMFAGNGMLLPATMTATPEAFNKGQLDRPGPSAGPFIVSSLD----
Mflv_2761|M.gilvum_PYR-GCK PNMLTNLGG----FKGMAIVSRANVESGRIATHPVGTGPFSFLGQ-----
Mvan_3773|M.vanbaalenii_PYR-1 PNMLTNLGG----FKGMAIVSRANVESGRIATQPVGTGPFRFLGQ-----
MSMEG_4354|M.smegmatis_MC2_155 PNLLTNLGG----FKGMAIVQRGNVESGQIATHPIGTGPFAFAGR-----
TH_4152|M.thermoresistible__bu PNLLTNLGG----FKGMAIVQRANVETGRIATHPVGTGPFEFRGA-----
MMAR_5154|M.marinum_M IDFMLSLGHS----SFYPLPEAAFKDMAAFGRNPIGNGPYRLDSGGEEPA
MUL_4240|M.ulcerans_Agy99 IDFMLSLGHS----SFYPLPEAAFKDMAAFGRNPIGNGPYRLDSGGEEPA
MAV_0464|M.avium_104 VDFKLRLGHS----AFYPLPQAAFRDMAAFGRHPIGNGPYQLAGGPDGPA
MAB_0426|M.abscessus_ATCC_1997 AIYPMTLGYT----AFLPLPKAFFRDPVKFGVHPIGNGPFKADG-----D
:. : : . **: .
Mb1311c|M.bovis_AF2122/97 -RTAQRIVLTRNPRWWGA-RPRLDSITY-LVLDDAARLPALQNNTIDATG
Rv1280c|M.tuberculosis_H37Rv -RTAQRIVLTRNPRWWGA-RPRLDSITY-LVLDDAARLPALQNNTIDATG
MLBr_01121|M.leprae_Br4923 -RTTQRIVLTHNPKWWGT-PPRLDSITY-LVLDDAARLPALQNNTIDATG
Mflv_2761|M.gilvum_PYR-GCK -KSGDSISLRANPDYWAG-PPGVAGVTFRFIPEPSTALSALQAGEVDWTD
Mvan_3773|M.vanbaalenii_PYR-1 -KSGDSISLAANPNYWDG-PPGVSGVTYRFISEPSTALSALQAGEIDWTD
MSMEG_4354|M.smegmatis_MC2_155 -KSGDSITLKANPHYWGP-EPRVSGVTFRFISEPATALSALQAGEIDWTD
TH_4152|M.thermoresistible__bu -RSGDSITLVANDDHWAG-PPRLNGVTFRFISEPATALSALQAGEIDWTD
MMAR_5154|M.marinum_M WEHNVKIDLVPNPDYRGNRKPRNKGLRFEFYANLETAYSDLLSGNLDVLD
MUL_4240|M.ulcerans_Agy99 WEHNVKIDLVPNPDYRGNRKPRNKGLRFEFYANLETAYSDLLSGNLDVLD
MAV_0464|M.avium_104 WEHNVRIDLRPNPDYHGNRKPRNKGLRFEFYANLDTAYADLLSGNLDVLD
MAB_0426|M.abscessus_ATCC_1997 WVRGVGFTLSRYDQYAGEKKAKAKGLIWRVYTEGLTAYTDMQAGALDIQL
: * . .: : . : : . : . :*
Mb1311c|M.bovis_AF2122/97 VGTLDQLTIAARTKGISIRRAPGP--SWYHFTLNGAPGSILADKALRLAI
Rv1280c|M.tuberculosis_H37Rv VGTLDQLTIAARTKGISIRRAPGP--SWYHFTLNGAPGSILADKALRLAI
MLBr_01121|M.leprae_Br4923 VGTLDQLTTAQRTNGISIRRTPAP--RWSHFTFNGAVGSILADQGLRLAV
Mflv_2761|M.gilvum_PYR-GCK SVPPQRVSQLRDDESLQLTVTPSN--DYWYLALNQAR-APWNDVRVRQAI
Mvan_3773|M.vanbaalenii_PYR-1 SVPPQRVTQLRDDESLELAVTPSN--DYWYLALNEAR-EPWNDVRVRQAV
MSMEG_4354|M.smegmatis_MC2_155 SVPPQRVAQLRDDDSLTLAVTPSN--DYWYLALNEAR-APWNDVRVRQAI
TH_4152|M.thermoresistible__bu AIPTQRVTQLRNDDSLTLAVTPSN--DYWYLALNHAR-APWHDLRVRRAI
MMAR_5154|M.marinum_M TIPSSALTVYGRDLGDNATSGPAAINQTLDTPLRLAHFGGEEGRLRRLAL
MUL_4240|M.ulcerans_Agy99 TIPSSALTVYGRDLGDNATSGPAAINQTLDTPLRLAHFGGEEGRLRRLAL
MAV_0464|M.avium_104 TIPPSALPVYRRDLGERVTAGPAAINQSLDTPLRLPHFGGEEGRLRRLAL
MAB_0426|M.abscessus_ATCC_1997 DLPDAAYENAKAEFGSAYLERPRPDITSLGFPMYDPRYRDVR---VRQAI
. . * .: . * *:
Mb1311c|M.bovis_AF2122/97 AKGIDRYTIARVAQYGLTSDPVPLNNHVFVAGQDGYQDNSGVVAYNPEQA
Rv1280c|M.tuberculosis_H37Rv AKGIDRYTIARVAQYGLTSDPVPLNNHVFVAGQDGYQDNSGVVAYNPEQA
MLBr_01121|M.leprae_Br4923 SKGIDRRTIAKVVQYGLANNPEPLNNHVYVDGQEGYQDNSGVVGYDPEQA
Mflv_2761|M.gilvum_PYR-GCK AYAIDRDAIVQATSYGTAA----ANQLAIPEGNPWFTPYDRYREDGEEGL
Mvan_3773|M.vanbaalenii_PYR-1 AYAVDRDAIVQATSYGTAA----VNQLAIPQGNPWFTPYDRYRDDGEQGL
MSMEG_4354|M.smegmatis_MC2_155 AYGIDRDAIATATSYRTAA----INQLAIPEGNPWFTSYDRYRFD----L
TH_4152|M.thermoresistible__bu AFGIDREAIVTATGYGTAT----ANQLAIPPGDFWYTHYDRYRYD----L
MMAR_5154|M.marinum_M SAAIDRPQICQQIFNGTRSAARDFTARSLPGFDPHIPGNEALDFN----P
MUL_4240|M.ulcerans_Agy99 SAAIDRPQICQQIFNGTRSAARDFTARSLPGFDPHIPGNEALDFN----P
MAV_0464|M.avium_104 SAAINRAQICRQIFADTRSPARDFTARSLPGFDPNIAGSDALDFD----P
MAB_0426|M.abscessus_ATCC_1997 SMAIDREAITQVIFSGTRTPATSYGSAVVYGYRKGACG-KLCELH----V
: .::* * .
Mb1311c|M.bovis_AF2122/97 KRELDALGWRRSGAFREKDGRQLVIRDLFYDAQSTRQFAQIAQHTLAQIG
Rv1280c|M.tuberculosis_H37Rv KRELDALGWRRSGAFREKDGRQLVIRDLFYDAQSTRQFAQIAQHTLAQIG
MLBr_01121|M.leprae_Br4923 QHELDALGWKLNGQFREKDGRQLVIRYLFYDAQGSREFAQLAQHSLAQIG
Mflv_2761|M.gilvum_PYR-GCK ETARDLLRQANAT----PGDLDMLVTTEYPETVT---AAQIVADNLAPLG
Mvan_3773|M.vanbaalenii_PYR-1 ETARTLLREAGAQ----PRELDMLVTTEYPETVT---AAQIIADNLAPLG
MSMEG_4354|M.smegmatis_MC2_155 DESKRLLDEAGAH----PENLDMLVTSEYPETVT---AAQIIADNLAPLG
TH_4152|M.thermoresistible__bu DRARALLDEARAAGVDPPRRLDMLVTGDYPQTVT---AAQIIADNVAPLG
MMAR_5154|M.marinum_M QRARQLWAQANAI----SPWSGSYAIAYNADSGHQEWVDTVANSIKNVLG
MUL_4240|M.ulcerans_Agy99 QRARQLWAQANAI----SPWSGSYAIAYNADSGHQEWVDAVANSIKNVLG
MAV_0464|M.avium_104 ERARRLWAQADAI----SAWSGSYPIAYNADAGHQDWVDAVANGIKNVLG
MAB_0426|M.abscessus_ATCC_1997 DEANKLLDEAHFD----RNKPIELWYSS-SSTGALSWVQAIGNQLQSNLK
. .: : :
Mb1311c|M.bovis_AF2122/97 VKLELQAKS-GSGFFSDYVNVGAFDIAQFGWVGDAFPLSSLTQIYASDG-
Rv1280c|M.tuberculosis_H37Rv VKLELQAKS-GSGFFSDYVNVGAFDIAQFGWVGDAFPLSSLTQIYASDG-
MLBr_01121|M.leprae_Br4923 VKLELQAKA-GSGFFTNYVNVGAFDIVQFGWVGDAFPLSALTQIYQSDG-
Mflv_2761|M.gilvum_PYR-GCK ITVNIRTVD-FATWLDE-QNSGNFDMLMMGWLGNIDPDDFYYAQHHTDG-
Mvan_3773|M.vanbaalenii_PYR-1 ISVKIRTVD-FATWLDE-QNSGNFDMLMMGWLGNIDPDDFYYAQHHTDG-
MSMEG_4354|M.smegmatis_MC2_155 ISVNIRTVD-FATWLDE-QNTGNFDMLMMGWLGNIDPDDFYYAQHHSNG-
TH_4152|M.thermoresistible__bu ITVDIRTVD-FATWLDE-QNNGTFDMLMMGWLGNIDPDDYYYAQHHTDG-
MMAR_5154|M.marinum_M IEAMGAPQPTFAGLRTQITNRTIDTAFRAGWQGDFPSMIEFLAPLYGTG-
MUL_4240|M.ulcerans_Agy99 IEAMGAPQPTFAGLRTQITNRTIDTAFRAGWQGDFPSMIEFLAPLYGTG-
MAV_0464|M.avium_104 IDALGAPQPTFAGFRTQITNRSIGSAFRSGWQGDYPSMIEFLAPLFATG-
MAB_0426|M.abscessus_ATCC_1997 VPYLLKSLP-WSQFLPLQDGKGMTGPFRSGWVMDYPSIYNFLESLYGTVA
: . : . ** : .
Mb1311c|M.bovis_AF2122/97 ----ESNFGKIGSPQIDAAIERTLAELDPGKARALANQVDELIWAEGFSL
Rv1280c|M.tuberculosis_H37Rv ----ESNFGKIGSPQIDAAIERTLAELDPGKARALANQVDELIWAEGFSL
MLBr_01121|M.leprae_Br4923 ----ESNFGKISSPAVDAAIERTLAELDPAKARALANEVDKLLWAEGFSL
Mflv_2761|M.gilvum_PYR-GCK ----TSNAQKFSNPEVDRLLDAGRVETDEQTRKAGYARAATLIADEVSYI
Mvan_3773|M.vanbaalenii_PYR-1 ----TSNAQKFSDPEVDRLLDASRVETDEAARKEQYAGAATLIADKVSYI
MSMEG_4354|M.smegmatis_MC2_155 ----TSNAQKFSDPEVDRLLDAGRVETDTAERKDVYARAATRIADEVSYI
TH_4152|M.thermoresistible__bu ----ASNAQRFSDPEVDRLLDAARAEPDRDRRKALYDRAATLIADRVSYL
MMAR_5154|M.marinum_M ---AGSNDVGYSNQEFDDALAAAAAAPTLQEADRLANVAQRILFHDMPTI
MUL_4240|M.ulcerans_Agy99 ---AGSNDVGYSNQEFDDALAAAAAAPTLQEADRLANVAQRILFHDMPTI
MAV_0464|M.avium_104 ---AGSNDVGYSSPRFDAALATAEAAPDLPQAAALANDAQRILFHDMPVV
MAB_0426|M.abscessus_ATCC_1997 LPPNGSNYVFYSNPAFDELLRQGNNEPTVELATKAYQKAEDLLFKDLPAA
** .. .* : . :
Mb1311c|M.bovis_AF2122/97 PLTQSPGTVAVRSTLANFGATGLADLDYTAIGFMRR--------
Rv1280c|M.tuberculosis_H37Rv PLTQSPGTVAVRSTLANFGATGLADLDYTAIGFMRR--------
MLBr_01121|M.leprae_Br4923 PLTQSPGDVAVRSTLANFGAAGFGDLNYTAIGFMQN--------
Mflv_2761|M.gilvum_PYR-GCK YLYNPSVIQAWNPALSGYEARRDGAVRFRSASLDSDGNV-----
Mvan_3773|M.vanbaalenii_PYR-1 YLYNPSVIQAWNPALSGYEARRDGAVRFRSATFGADGGA-----
MSMEG_4354|M.smegmatis_MC2_155 YLYNPSVIQAWSNDLSGYVARRDGAIRFRTADLGRGGPE-----
TH_4152|M.thermoresistible__bu FLYNPAVVQAWSPDLSGYRARRDAAVRFRDASLNRDGLNRDGPP
MMAR_5154|M.marinum_M PLWDYIAVVGWSTEVSNVQVTWNGLPDYENLVKA----------
MUL_4240|M.ulcerans_Agy99 PLWDYIAVVGWSTEVSNVQVTWNGLPDYENLVKA----------
MAV_0464|M.avium_104 PLWNYISVVGWSGEVSHVTVTWNGLPDYENIVKA----------
MAB_0426|M.abscessus_ATCC_1997 PLFYEVNQAVHSKRVRNVKIGIQDCIEYADVEVVQ---------
* : :