For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4087 | - | - | 100% (267) | ABC transporter ATP-binding protein |
| M. thermoresistible (build 8) | TH_3313 | - | 1e-35 | 36.23% (265) | PUTATIVE ABC transporter related |
| M. thermoresistible (build 8) | TH_3858 | - | 1e-26 | 33.61% (241) | PUTATIVE ABC transporter related |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1270 | sugC | 8e-20 | 29.33% (225) | sugar-transport ATP-binding protein ABC transporter SugC |
| M. gilvum PYR-GCK | Mflv_3801 | - | 1e-122 | 88.28% (256) | ABC transporter related |
| M. tuberculosis H37Rv | Rv1238 | sugC | 8e-20 | 29.33% (225) | sugar-transport ATP-binding protein ABC transporter SugC |
| M. leprae Br4923 | MLBr_01089 | - | 8e-20 | 27.68% (224) | putative ABC-transport protein, ATP-binding component |
| M. abscessus ATCC 19977 | MAB_2623c | - | 6e-37 | 37.50% (264) | branched chain amino acid ABC transporter |
| M. marinum M | MMAR_3715 | cysA1 | 5e-19 | 29.32% (249) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
| M. avium 104 | MAV_3250 | - | 3e-19 | 30.71% (254) | daunorubicin resistance ATP-binding protein DrrA |
| M. smegmatis MC2 155 | MSMEG_2979 | - | 1e-129 | 91.86% (258) | ABC transporter ATP-binding protein |
| M. ulcerans Agy99 | MUL_3658 | cysA1 | 7e-19 | 29.51% (244) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
| M. vanbaalenii PYR-1 | Mvan_2593 | - | 1e-125 | 89.53% (258) | ABC transporter-related protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3801|M.gilvum_PYR-GCK -------------------MSDVQASIAAKEPAEGGNAGMGAQYLEVRGL
Mvan_2593|M.vanbaalenii_PYR-1 -------------------MTEVEASTAGKEPVEGGNAGMGAQYLEVRGL
MSMEG_2979|M.smegmatis_MC2_155 -------------------MTDTET-TAEKEPVAGGNAGMGAEYLEVRGL
TH_4087|M.thermoresistible__bu -------------------MT-----TAAREPVAGGNAGMRAEYLEVRGL
MAB_2623c|M.abscessus_ATCC_199 MTKHRDSSLDDEQDSVEMLQAEIEEGSDEGESGVPVDPGEAEVLLEVKDL
Mb1270|M.bovis_AF2122/97 -----------------------------------------MAEIVLDHV
Rv1238|M.tuberculosis_H37Rv -----------------------------------------MAEIVLDHV
MLBr_01089|M.leprae_Br4923 -----------------------------------------MAEIVLEHV
MMAR_3715|M.marinum_M ----------------------------MKKETSLTGPGTGGHAIVVRDA
MUL_3658|M.ulcerans_Agy99 ----------------------------------MTGPGTGGHAIVVRDA
MAV_3250|M.avium_104 ---------------------------------------MSAPAIEVEGL
: :
Mflv_3801|M.gilvum_PYR-GCK TVDFDG-FKAVSDVDLTLFQGDLRFLIGPNGAGKTTVIDAITGLVS-ASG
Mvan_2593|M.vanbaalenii_PYR-1 TVDFDG-FKAVSDVDLTLFQGDLRFLIGPNGAGKTTVIDAITGLVP-ATG
MSMEG_2979|M.smegmatis_MC2_155 TVDFDG-FKAVNGVDLTLFQGDLRFLIGPNGAGKTTVIDAITGLVP-ATG
TH_4087|M.thermoresistible__bu TVDFDG-FKAVSGVDLTLFQGDLRFLIGPNGAGKTTVIDAITGLVP-ATG
MAB_2623c|M.abscessus_ATCC_199 TLKFGG-LQALDGVSFDIRRGEILGLVGPNGAGKTTCFNAITGVYKPTSG
Mb1270|M.bovis_AF2122/97 NKSYPDGHTAVRDLNLTIADGEFLILVGPSGCGKTTTLNMIAGLEDISSG
Rv1238|M.tuberculosis_H37Rv NKSYPDGHTAVRDLNLTIADGEFLILVGPSGCGKTTTLNMIAGLEDISSG
MLBr_01089|M.leprae_Br4923 NKNYPNGATAVHDLSITVADGEFLILIGPSGCGKTTTLNMIAGLEDISSG
MMAR_3715|M.marinum_M FKQYGD-FVALDHVDFVVPAGSLTALLGPSGSGKSTLLRTIAGLDQPDSG
MUL_3658|M.ulcerans_Agy99 FKQYGD-FVALDHVDFVVPAGSLTALLGPSGSGKSTLLRTIAGLDQPDSG
MAV_3250|M.avium_104 TKKFGGSTLALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSG
.: . *: :.: : * . *:* .*.**:* : :: : :*
Mflv_3801|M.gilvum_PYR-GCK SVNKSGVELLGKKVNQIARLGVGRTFQTASVFEQLTVLQNLDIAAGAGRS
Mvan_2593|M.vanbaalenii_PYR-1 SVNKSGVELLGKKVHQIARRGVGRTFQTASVFEQLTVLQNLDIAAGAGRS
MSMEG_2979|M.smegmatis_MC2_155 SVNKSGAELLGKKVHQIARLGVGRTFQTASVFEQLTVLQNLDIAAGAGRS
TH_4087|M.thermoresistible__bu SVNKSGVELLGKKVHQIARLGVGRTFQTASVFETLTVLQNLDIAAGAGRS
MAB_2623c|M.abscessus_ATCC_199 SIVFNGKPLRRLRRHQITRRGIARTFQNIRLFGEMTALENVAVGTDARHK
Mb1270|M.bovis_AF2122/97 ELRIAGERVN---EKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLTLAK-
Rv1238|M.tuberculosis_H37Rv ELRIAGERVN---EKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLTLAK-
MLBr_01089|M.leprae_Br4923 ELRIDGDRVN---EKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLMLAK-
MMAR_3715|M.marinum_M NITINGRDVT---RVPPQRRGIGFVFQHYAAFKHLTVRDNVAYGLKIRK-
MUL_3658|M.ulcerans_Agy99 NITINGRDVT---RVPPQRRGIGFVFQHYAAFKHLTVRDNVAYGLKIRK-
MAV_3250|M.avium_104 RARVAGYDVVR--QPAEVRASIGMAGQFTGMDPMLTGRENLVLFGRLRG-
* : .:. . * :* :*:
Mflv_3801|M.gilvum_PYR-GCK VWTL---------LRRRNGVLPAIEQALHTTGLTHLADKPAGVLAHGQKQ
Mvan_2593|M.vanbaalenii_PYR-1 VWTL---------LRRRNGVLPAIEQALHTIGLTHLADKPAGVLAHGQKQ
MSMEG_2979|M.smegmatis_MC2_155 PWSL---------LRRRRGVLPSIEEALETTGLADLADKPAGVLAHGQKQ
TH_4087|M.thermoresistible__bu WRTL---------LRRRGAVLPQITETLQTIGLADLADEPAGTLAHGQKQ
MAB_2623c|M.abscessus_ATCC_199 TSVLGALLRTPRHRREEHYAVDVGMGLLDFVGIADDADVKAKNLPYGSQR
Mb1270|M.bovis_AF2122/97 --------------MRKADIAQKVSETAKILDLTNLLDRKPSQLSGGQRQ
Rv1238|M.tuberculosis_H37Rv --------------MRKADIAQKVSETAKILDLTNLLDRKPSQLSGGQRQ
MLBr_01089|M.leprae_Br4923 --------------VKKAEIAQKVSETAQILDLTDLLDRKPSQLSGGQRQ
MMAR_3715|M.marinum_M --------------RPKAEIRDKVDNLLEVVGLSGFHGRYPNQLSGGQRQ
MUL_3658|M.ulcerans_Agy99 --------------RPKAEIRDKVDNLLEVVGLSGFHGRYPDQLSGGQRQ
MAV_3250|M.avium_104 --------------LNRRRAKARADELLEQFNLVDAADRRLSTYSGGMYR
. . .: . . * :
Mflv_3801|M.gilvum_PYR-GCK WLEIGMLLVQNADVLLLDEPVAGMSAEEREETGNLLRRIGAE--RTVVVV
Mvan_2593|M.vanbaalenii_PYR-1 WLEIGMLLVQNADVLLLDEPVAGMSAEEREETGNLLRRIGAE--RTVVVV
MSMEG_2979|M.smegmatis_MC2_155 WLEIGMLLVQNADVLLLDEPVAGMSHEEREETGNLLRRIGGA--RTVVVV
TH_4087|M.thermoresistible__bu WLEIGMLLVQNADVLLLDEPVAGMSHEEREQTGNLLRRIGGE--RTVVVV
MAB_2623c|M.abscessus_ATCC_199 RLEIARALATEPKLLCLDEPAAGFTPSEKDSLIELIQRIRDYG-YTVLLI
Mb1270|M.bovis_AF2122/97 RVAMGRAIVRHPKAFLMDEPLSNLDAKLRVQMRGEIAQLQRRLGTTTVYV
Rv1238|M.tuberculosis_H37Rv RVAMGRAIVRHPKAFLMDEPLSNLDAKLRVQMRGEIAQLQRRLGTTTVYV
MLBr_01089|M.leprae_Br4923 RVAMGRAIVRHPKAFLMDEPLSNLDAKLRVRTRGEIARLQRRLGATTVYV
MMAR_3715|M.marinum_M RMALARALAVDPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLV
MUL_3658|M.ulcerans_Agy99 RMALARALAVDPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLV
MAV_3250|M.avium_104 RVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLRVQG-ISVLLT
: :. :. .. : :*** : : : : :.:
Mflv_3801|M.gilvum_PYR-GCK EHDMDFMRAFATSVTVLARGQVIAEGSVAEVQANPR--VQEVYLG-----
Mvan_2593|M.vanbaalenii_PYR-1 EHDMDFMRAFATSVTVLARGQVIAEGSVTEVQANPK--VQEVYLG-----
MSMEG_2979|M.smegmatis_MC2_155 EHDMDFMRAFATSVTVLARGQVIAEGTVAEVQANPK--VQEVYLG-----
TH_4087|M.thermoresistible__bu EHDMDFMRAFATSVTVLARGQVIAEGTVEEVQANPK--VQEVYLG-----
MAB_2623c|M.abscessus_ATCC_199 EHDMKLVMGVTDRIVVLEFGRKIADGLPAEVRNDPA--VIEAYLG-----
Mb1270|M.bovis_AF2122/97 THDQTEAMTLGDRVVVMYGGIAQQIGTPEELYERPANLFVAGFIGSPAMN
Rv1238|M.tuberculosis_H37Rv THDQTEAMTLGDRVVVMYGGIAQQIGTPEELYERPANLFVAGFIGSPAMN
MLBr_01089|M.leprae_Br4923 THDQTEAMTLGDRVVVMRSGVVQQIGTPDELYERPVNLFVAGFIGSPVMN
MMAR_3715|M.marinum_M THDQAEALDVADRIAVLNSGRIEQVGSPTEVYDAPANAFVMSFLG-----
MUL_3658|M.ulcerans_Agy99 THDQAEALDVADRIAVLNSGRIEQVGSPTEVYDAPTNAFVMSFLG-----
MAV_3250|M.avium_104 TQYLEEADVLSDSIVVIDHGRVIASGTSEELKRAVGTSYCQVTPAN----
: . :.*: * * *: .
Mflv_3801|M.gilvum_PYR-GCK -----------------------------------TAAAGADGIELVEEN
Mvan_2593|M.vanbaalenii_PYR-1 -----------------------------------TAAAGADGIELVEEN
MSMEG_2979|M.smegmatis_MC2_155 -----------------------------------TAAAGAEGIA-----
TH_4087|M.thermoresistible__bu -----------------------------------TAAELPEEAH-----
MAB_2623c|M.abscessus_ATCC_199 -----------------------------------VADEDFHGPGWLDSA
Mb1270|M.bovis_AF2122/97 FFPARLTAIGLTLPFGEVTLAPEVQGVIAAHPKPENVIVGVRPEHIQDAA
Rv1238|M.tuberculosis_H37Rv FFPARLTAIGLTLPFGEVTLAPEVQGVIAAHPKPENVIVGVRPEHIQDAA
MLBr_01089|M.leprae_Br4923 FFPAKLTPNGLTLPLGELNLSRDVQAMIGQHPVPDRVIVGVRPEHLTDAK
MMAR_3715|M.marinum_M -------------AVSALNGALVRPHDIRVGRTPEMAVAAADGTGESTGV
MUL_3658|M.ulcerans_Agy99 -------------AVSALNGALVRPHDIRVGRTPEMAVAAADGTGESTGV
MAV_3250|M.avium_104 --------------------------------PAELPQVAAALTGLEGIE
Mflv_3801|M.gilvum_PYR-GCK S-------------------------------------------------
Mvan_2593|M.vanbaalenii_PYR-1 S-------------------------------------------------
MSMEG_2979|M.smegmatis_MC2_155 --------------------------------------------------
TH_4087|M.thermoresistible__bu --------------------------------------------------
MAB_2623c|M.abscessus_ATCC_199 PPDSESER------------------------------------------
Mb1270|M.bovis_AF2122/97 LIDAYQRIRALTFQVKVNLVESLGADKYLYFTTESPAVHSVQLDELAEVE
Rv1238|M.tuberculosis_H37Rv LIDAYQRIRALTFQVKVNLVESLGADKYLYFTTESPAVHSVQLDELAEVE
MLBr_01089|M.leprae_Br4923 LIDAHQHGTVLTFKVKVDLVESLGADKYIYFTTTGCDVYSAQLDELAS--
MMAR_3715|M.marinum_M TRAVVDRIVVLGFEVRVELTSAATGGAFTAQITRG------DAEALALQE
MUL_3658|M.ulcerans_Agy99 TRAVVDRIVVLGFEVRVELTSAATGGAFTAQITRG------DAEALALQE
MAV_3250|M.avium_104 IDSDTGSVSVFAPDGVATLVEVFR-----------------RVDALGLEL
Mflv_3801|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2593|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2979|M.smegmatis_MC2_155 --------------------------------------------------
TH_4087|M.thermoresistible__bu --------------------------------------------------
MAB_2623c|M.abscessus_ATCC_199 --------------------------------------------------
Mb1270|M.bovis_AF2122/97 GESALHENQFVARVPAESKVAIGQSVELAFDTARLAVFDADSGANLTIPH
Rv1238|M.tuberculosis_H37Rv GESALHENQFVARVPAESKVAIGQSVELAFDTARLAVFDADSGANLTIPH
MLBr_01089|M.leprae_Br4923 -ELEVRENQFVARVSAESKMAIGESIELAFGTAKIAVFDADSGVNLTVSA
MMAR_3715|M.marinum_M GDTVYVRATRVPPIAGAAPAVPDDGAGSTPSAAQIGVGGQ----------
MUL_3658|M.ulcerans_Agy99 GDTVYVRATRVPPIAGAAPAVPDDGAGSTPRAAQIGVGGQ----------
MAV_3250|M.avium_104 ADISLRKPSLDEAFLHLTERTVARS-------------------------
Mflv_3801|M.gilvum_PYR-GCK ----
Mvan_2593|M.vanbaalenii_PYR-1 ----
MSMEG_2979|M.smegmatis_MC2_155 ----
TH_4087|M.thermoresistible__bu ----
MAB_2623c|M.abscessus_ATCC_199 ----
Mb1270|M.bovis_AF2122/97 RA--
Rv1238|M.tuberculosis_H37Rv RA--
MLBr_01089|M.leprae_Br4923 PTDA
MMAR_3715|M.marinum_M ----
MUL_3658|M.ulcerans_Agy99 ----
MAV_3250|M.avium_104 ----