For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. gilvum PYR-GCK Mflv_3801 (-)

annotation: ABC transporter related
coordinates: 4058360 - 4059193
length: 277

MSDVQASIAAKEPAEGGNAGMGAQYLEVRGLTVDFDGFKAVSDVDLTLFQGDLRFLIGPNGAGKTTVIDA
ITGLVSASGSVNKSGVELLGKKVNQIARLGVGRTFQTASVFEQLTVLQNLDIAAGAGRSVWTLLRRRNGV
LPAIEQALHTTGLTHLADKPAGVLAHGQKQWLEIGMLLVQNADVLLLDEPVAGMSAEEREETGNLLRRIG
AERTVVVVEHDMDFMRAFATSVTVLARGQVIAEGSVAEVQANPRVQEVYLGTAAAGADGIELVEENS
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_3801--100% (277)ABC transporter related
M. gilvum PYR-GCKMflv_3571-9e-3537.01% (254) ABC transporter related
M. gilvum PYR-GCKMflv_3165-4e-2330.27% (261) ABC transporter related

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1270sugC6e-2027.68% (224) sugar-transport ATP-binding protein ABC transporter SugC
M. tuberculosis H37RvRv1238sugC6e-2027.68% (224) sugar-transport ATP-binding protein ABC transporter SugC
M. leprae Br4923MLBr_01089-5e-1927.68% (224) putative ABC-transport protein, ATP-binding component
M. abscessus ATCC 19977MAB_2623c-3e-3335.50% (262) branched chain amino acid ABC transporter
M. marinum MMMAR_3715cysA13e-2028.97% (252) sulfate-transport ATP-binding protein ABC transporter CysA1
M. avium 104MAV_1785-4e-1929.31% (232) sulfate/thiosulfate import ATP-binding protein CysA
M. smegmatis MC2 155MSMEG_2979-1e-13188.89% (270) ABC transporter ATP-binding protein
M. thermoresistible (build 8)TH_4087-1e-12288.28% (256) PUTATIVE ABC transporter ATP-binding protein
M. ulcerans Agy99MUL_3658cysA13e-2028.97% (252) sulfate-transport ATP-binding protein ABC transporter CysA1
M. vanbaalenii PYR-1Mvan_2593-1e-14695.31% (277) ABC transporter-related protein

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_3801|M.gilvum_PYR-GCK          -------------------MSDVQASIAAKEPAEGGNAGMGAQYLEVRGL
Mvan_2593|M.vanbaalenii_PYR-1       -------------------MTEVEASTAGKEPVEGGNAGMGAQYLEVRGL
MSMEG_2979|M.smegmatis_MC2_155      -------------------MTDTET-TAEKEPVAGGNAGMGAEYLEVRGL
TH_4087|M.thermoresistible__bu      -------------------MT-----TAAREPVAGGNAGMRAEYLEVRGL
MAB_2623c|M.abscessus_ATCC_199      MTKHRDSSLDDEQDSVEMLQAEIEEGSDEGESGVPVDPGEAEVLLEVKDL
Mb1270|M.bovis_AF2122/97            -----------------------------------------MAEIVLDHV
Rv1238|M.tuberculosis_H37Rv         -----------------------------------------MAEIVLDHV
MLBr_01089|M.leprae_Br4923          -----------------------------------------MAEIVLEHV
MMAR_3715|M.marinum_M               --------------------------MKKETSLTGPGT--GGHAIVVRDA
MUL_3658|M.ulcerans_Agy99           --------------------------------MTGPGT--GGHAIVVRDA
MAV_1785|M.avium_104                --------------------------------MTDAGTDRGDIAITVRDA
                                                                                : :   

Mflv_3801|M.gilvum_PYR-GCK          TVDFDG-FKAVSDVDLTLFQGDLRFLIGPNGAGKTTVIDAITGLVS-ASG
Mvan_2593|M.vanbaalenii_PYR-1       TVDFDG-FKAVSDVDLTLFQGDLRFLIGPNGAGKTTVIDAITGLVP-ATG
MSMEG_2979|M.smegmatis_MC2_155      TVDFDG-FKAVNGVDLTLFQGDLRFLIGPNGAGKTTVIDAITGLVP-ATG
TH_4087|M.thermoresistible__bu      TVDFDG-FKAVSGVDLTLFQGDLRFLIGPNGAGKTTVIDAITGLVP-ATG
MAB_2623c|M.abscessus_ATCC_199      TLKFGG-LQALDGVSFDIRRGEILGLVGPNGAGKTTCFNAITGVYKPTSG
Mb1270|M.bovis_AF2122/97            NKSYPDGHTAVRDLNLTIADGEFLILVGPSGCGKTTTLNMIAGLEDISSG
Rv1238|M.tuberculosis_H37Rv         NKSYPDGHTAVRDLNLTIADGEFLILVGPSGCGKTTTLNMIAGLEDISSG
MLBr_01089|M.leprae_Br4923          NKNYPNGATAVHDLSITVADGEFLILIGPSGCGKTTTLNMIAGLEDISSG
MMAR_3715|M.marinum_M               FKQYGD-FVALDHVDFVVPAGSLTALLGPSGSGKSTLLRTIAGLDQPDSG
MUL_3658|M.ulcerans_Agy99           FKQYGD-FVALDHVDFVVPAGSLTALLGPSGSGKSTLLRTIAGLDQPDSG
MAV_1785|M.avium_104                YKRYGD-FVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTG
                                       : .   *:  :.: :  *.:  *:**.*.**:* :  *:*:    :*

Mflv_3801|M.gilvum_PYR-GCK          SVNKSGVELLGKKVNQIARLGVGRTFQTASVFEQLTVLQNLDIAAGAGRS
Mvan_2593|M.vanbaalenii_PYR-1       SVNKSGVELLGKKVHQIARRGVGRTFQTASVFEQLTVLQNLDIAAGAGRS
MSMEG_2979|M.smegmatis_MC2_155      SVNKSGAELLGKKVHQIARLGVGRTFQTASVFEQLTVLQNLDIAAGAGRS
TH_4087|M.thermoresistible__bu      SVNKSGVELLGKKVHQIARLGVGRTFQTASVFETLTVLQNLDIAAGAGRS
MAB_2623c|M.abscessus_ATCC_199      SIVFNGKPLRRLRRHQITRRGIARTFQNIRLFGEMTALENVAVGTDARHK
Mb1270|M.bovis_AF2122/97            ELRIAGERVN---EKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLTLAK-
Rv1238|M.tuberculosis_H37Rv         ELRIAGERVN---EKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLTLAK-
MLBr_01089|M.leprae_Br4923          ELRIDGDRVN---EKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLMLAK-
MMAR_3715|M.marinum_M               NITINGRDVT---RVPPQRRGIGFVFQHYAAFKHLTVRDNVAYGLKIRK-
MUL_3658|M.ulcerans_Agy99           NITINGRDVT---RVPPQRRGIGFVFQHYAAFKHLTVRDNVAYGLKIRK-
MAV_1785|M.avium_104                TVTIYGRDVT---RVPPQRRGIGFVFQHYAAFKHLTVRDNVAYGLKVRK-
                                     :   *  :           .:. .**    :  :*. :*:       : 

Mflv_3801|M.gilvum_PYR-GCK          VWTL---------LRRRNGVLPAIEQALHTTGLTHLADKPAGVLAHGQKQ
Mvan_2593|M.vanbaalenii_PYR-1       VWTL---------LRRRNGVLPAIEQALHTIGLTHLADKPAGVLAHGQKQ
MSMEG_2979|M.smegmatis_MC2_155      PWSL---------LRRRRGVLPSIEEALETTGLADLADKPAGVLAHGQKQ
TH_4087|M.thermoresistible__bu      WRTL---------LRRRGAVLPQITETLQTIGLADLADEPAGTLAHGQKQ
MAB_2623c|M.abscessus_ATCC_199      TSVLGALLRTPRHRREEHYAVDVGMGLLDFVGIADDADVKAKNLPYGSQR
Mb1270|M.bovis_AF2122/97            --------------MRKADIAQKVSETAKILDLTNLLDRKPSQLSGGQRQ
Rv1238|M.tuberculosis_H37Rv         --------------MRKADIAQKVSETAKILDLTNLLDRKPSQLSGGQRQ
MLBr_01089|M.leprae_Br4923          --------------VKKAEIAQKVSETAQILDLTDLLDRKPSQLSGGQRQ
MMAR_3715|M.marinum_M               --------------RPKAEIRDKVDNLLEVVGLSGFHGRYPNQLSGGQRQ
MUL_3658|M.ulcerans_Agy99           --------------RPKAEIRDKVDNLLEVVGLSGFHGRYPDQLSGGQRQ
MAV_1785|M.avium_104                --------------RPKAEIKAKVDNLLEVVGLSGFQGRYPNQLSGGQRQ
                                                    .           .  .::   .  .  *. *.::

Mflv_3801|M.gilvum_PYR-GCK          WLEIGMLLVQNADVLLLDEPVAGMSAEEREETGNLLRRIGAE--RTVVVV
Mvan_2593|M.vanbaalenii_PYR-1       WLEIGMLLVQNADVLLLDEPVAGMSAEEREETGNLLRRIGAE--RTVVVV
MSMEG_2979|M.smegmatis_MC2_155      WLEIGMLLVQNADVLLLDEPVAGMSHEEREETGNLLRRIGGA--RTVVVV
TH_4087|M.thermoresistible__bu      WLEIGMLLVQNADVLLLDEPVAGMSHEEREQTGNLLRRIGGE--RTVVVV
MAB_2623c|M.abscessus_ATCC_199      RLEIARALATEPKLLCLDEPAAGFTPSEKDSLIELIQRIRDYG-YTVLLI
Mb1270|M.bovis_AF2122/97            RVAMGRAIVRHPKAFLMDEPLSNLDAKLRVQMRGEIAQLQRRLGTTTVYV
Rv1238|M.tuberculosis_H37Rv         RVAMGRAIVRHPKAFLMDEPLSNLDAKLRVQMRGEIAQLQRRLGTTTVYV
MLBr_01089|M.leprae_Br4923          RVAMGRAIVRHPKAFLMDEPLSNLDAKLRVRTRGEIARLQRRLGATTVYV
MMAR_3715|M.marinum_M               RMALARALAVDPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLV
MUL_3658|M.ulcerans_Agy99           RMALARALAVDPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLV
MAV_1785|M.avium_104                RMALARALAVDPQVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLV
                                     : :.  :. ... : :*** . :  . :      : ::      *.: :

Mflv_3801|M.gilvum_PYR-GCK          EHDMDFMRAFATSVTVLARGQVIAEGSVAEVQANPRVQEVYLG-------
Mvan_2593|M.vanbaalenii_PYR-1       EHDMDFMRAFATSVTVLARGQVIAEGSVTEVQANPKVQEVYLG-------
MSMEG_2979|M.smegmatis_MC2_155      EHDMDFMRAFATSVTVLARGQVIAEGTVAEVQANPKVQEVYLG-------
TH_4087|M.thermoresistible__bu      EHDMDFMRAFATSVTVLARGQVIAEGTVEEVQANPKVQEVYLG-------
MAB_2623c|M.abscessus_ATCC_199      EHDMKLVMGVTDRIVVLEFGRKIADGLPAEVRNDPAVIEAYLG-------
Mb1270|M.bovis_AF2122/97            THDQTEAMTLGDRVVVMYGGIAQQIGTPEELYERPAN--LFVAGFIGSPA
Rv1238|M.tuberculosis_H37Rv         THDQTEAMTLGDRVVVMYGGIAQQIGTPEELYERPAN--LFVAGFIGSPA
MLBr_01089|M.leprae_Br4923          THDQTEAMTLGDRVVVMRSGVVQQIGTPDELYERPVN--LFVAGFIGSPV
MMAR_3715|M.marinum_M               THDQAEALDVADRIAVLNSGRIEQVGSPTEVYDAPAN--AFVMSFLG---
MUL_3658|M.ulcerans_Agy99           THDQAEALDVADRIAVLNSGRIEQVGSPTEVYDAPTN--AFVMSFLG---
MAV_1785|M.avium_104                THDQAEALDVADRIAVLNQGRIEQIGSPTEVYDAPTN--AFVMSFLG---
                                     **      .   :.*:  *     *   *:   *     ::        

Mflv_3801|M.gilvum_PYR-GCK          -------------------------------------TAAAGADGIELVE
Mvan_2593|M.vanbaalenii_PYR-1       -------------------------------------TAAAGADGIELVE
MSMEG_2979|M.smegmatis_MC2_155      -------------------------------------TAAAGAEGIA---
TH_4087|M.thermoresistible__bu      -------------------------------------TAAELPEEAH---
MAB_2623c|M.abscessus_ATCC_199      -------------------------------------VADEDFHGPGWLD
Mb1270|M.bovis_AF2122/97            MNFFPARLTAIGLTLPFGEVTLAPEVQGVIAAHPKPENVIVGVRPEHIQD
Rv1238|M.tuberculosis_H37Rv         MNFFPARLTAIGLTLPFGEVTLAPEVQGVIAAHPKPENVIVGVRPEHIQD
MLBr_01089|M.leprae_Br4923          MNFFPAKLTPNGLTLPLGELNLSRDVQAMIGQHPVPDRVIVGVRPEHLTD
MMAR_3715|M.marinum_M               -----------AVSALNGALVRPHDIR----VGRTPEMAVAAADGTGEST
MUL_3658|M.ulcerans_Agy99           -----------AVSALNGALVRPHDIR----VGRTPEMAVAAADGTGEST
MAV_1785|M.avium_104                -----------AVSTLNGTLVRPHDIR----VGRTPEMAVAAEDGTAEST
                                                                          .           

Mflv_3801|M.gilvum_PYR-GCK          ENS-----------------------------------------------
Mvan_2593|M.vanbaalenii_PYR-1       ENS-----------------------------------------------
MSMEG_2979|M.smegmatis_MC2_155      --------------------------------------------------
TH_4087|M.thermoresistible__bu      --------------------------------------------------
MAB_2623c|M.abscessus_ATCC_199      SAPPDSESER----------------------------------------
Mb1270|M.bovis_AF2122/97            AALIDAYQRIRALTFQVKVNLVESLGADKYLYFTTESPAVHSVQLDELAE
Rv1238|M.tuberculosis_H37Rv         AALIDAYQRIRALTFQVKVNLVESLGADKYLYFTTESPAVHSVQLDELAE
MLBr_01089|M.leprae_Br4923          AKLIDAHQHGTVLTFKVKVDLVESLGADKYIYFTTTGCDVYSAQLDELAS
MMAR_3715|M.marinum_M               GVTRAVVDRIVVLGFEVRVELTSAATGGAFTAQITRG------DAEALAL
MUL_3658|M.ulcerans_Agy99           GVTRAVVDRIVVLGFEVRVELTSAATGGAFTAQITRG------DAEALAL
MAV_1785|M.avium_104                GVARAIVDRVVKLGFEVRVELTSAATGGPFTAQITRG------DAEALAL
                                                                                      

Mflv_3801|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_2593|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_2979|M.smegmatis_MC2_155      --------------------------------------------------
TH_4087|M.thermoresistible__bu      --------------------------------------------------
MAB_2623c|M.abscessus_ATCC_199      --------------------------------------------------
Mb1270|M.bovis_AF2122/97            VEGESALHENQFVARVPAESKVAIGQSVELAFDTARLAVFDADSGANLTI
Rv1238|M.tuberculosis_H37Rv         VEGESALHENQFVARVPAESKVAIGQSVELAFDTARLAVFDADSGANLTI
MLBr_01089|M.leprae_Br4923          ---ELEVRENQFVARVSAESKMAIGESIELAFGTAKIAVFDADSGVNLTV
MMAR_3715|M.marinum_M               QEGDTVYVRATRVPPIAGAAPAVPDDGAGSTPSAAQIGVGGQ--------
MUL_3658|M.ulcerans_Agy99           QEGDTVYVRATRVPPIAGAAPAVPDDGAGSTPRAAQIGVGGQ--------
MAV_1785|M.avium_104                REGDTVYVRATRVPPITAGATTVPAVSRDGADEATLTSA-----------
                                                                                      

Mflv_3801|M.gilvum_PYR-GCK          ------
Mvan_2593|M.vanbaalenii_PYR-1       ------
MSMEG_2979|M.smegmatis_MC2_155      ------
TH_4087|M.thermoresistible__bu      ------
MAB_2623c|M.abscessus_ATCC_199      ------
Mb1270|M.bovis_AF2122/97            PHRA--
Rv1238|M.tuberculosis_H37Rv         PHRA--
MLBr_01089|M.leprae_Br4923          SAPTDA
MMAR_3715|M.marinum_M               ------
MUL_3658|M.ulcerans_Agy99           ------
MAV_1785|M.avium_104                ------