For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3772 | - | - | 100% (838) | putative AAA ATPase containing von Willebrand factor type A (vWA) |
M. thermoresistible (build 8) | TH_2700 | - | e-100 | 36.73% (825) | PUTATIVE putative AAA ATPase containing von Willebrand factor |
M. thermoresistible (build 8) | TH_4068 | - | 2e-66 | 34.42% (581) | PUTATIVE putative conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2640 | PPE42 | 4e-13 | 31.28% (243) | PPE family protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2608 | PPE42 | 4e-13 | 31.28% (243) | PPE family protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4141 | - | 1e-05 | 21.80% (266) | PE/PPE family protein |
M. marinum M | MMAR_3427 | - | 2e-10 | 29.82% (275) | PE family protein |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_0200 | - | 1e-145 | 41.72% (906) | hypothetical protein MSMEG_0200 |
M. ulcerans Agy99 | MUL_0967 | - | 3e-08 | 27.49% (342) | PE family protein |
M. vanbaalenii PYR-1 | Mvan_3952 | - | 2e-05 | 52.83% (53) | hypothetical protein Mvan_3952 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3427|M.marinum_M --------------------MAFLVAEPQVMATVAGQVEEIGSAIGVANE MUL_0967|M.ulcerans_Agy99 ------------------MAVIDLLASPQAMTATATEVAEIGLAINQADL Mb2640|M.bovis_AF2122/97 MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTT Rv2608|M.tuberculosis_H37Rv MNFAVLPPEVNSARIFAGAGLGPMLAAASAWDGLAEELHAAAGSFASVTT TH_3772|M.thermoresistible__bu --MAKHTKTTRRSKKLATLGVATATATATALTVGAAPPEVETSALRNADV MSMEG_0200|M.smegmatis_MC2_155 -MAGKNRKRGQRAKKIATL--SAATVTATALTAGIAPIGEANAAVVAREA Mvan_3952|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_4141|M.abscessus_ATCC_1997 -------------------------------------------------- MMAR_3427|M.marinum_M FAAG-SISGVAAAAGDEVSAAIASFFAAHGQAYQAVAGQVEAFHTEFQQA MUL_0967|M.ulcerans_Agy99 AVAG-PTTGLAAAAAAEVSEAIATLFDNYAQGYQAVSRQTAAFHDAFAQT Mb2640|M.bovis_AF2122/97 GLAGDAWHGPASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEAT Rv2608|M.tuberculosis_H37Rv GLAGDAWHGPASLAMTRAASPYVGWLNTAAGQAAQAAGQARLAASAFEAT TH_3772|M.thermoresistible__bu DLLAGIQFYPEPEHIPDLTFGLGAVGYGLSQDFAEMAIRGLVDNISFAAL MSMEG_0200|M.smegmatis_MC2_155 ALQADVRPFPPPDQIPDITGGLGAAGYDLAQAIGAQVMTSLMESISLAAL Mvan_3952|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_4141|M.abscessus_ATCC_1997 ----------------------------MAGQYSVPGKRHSLRRYVATIT MMAR_3427|M.marinum_M LAQAGN-------------------------------------------- MUL_0967|M.ulcerans_Agy99 LFAASD-------------------------------------------- Mb2640|M.bovis_AF2122/97 LAATVSPAMVAANRTRLASLVAANLLGQNAPAIAAAEAEYEQIWAQDVAA Rv2608|M.tuberculosis_H37Rv LAATVSPAMVAANRTRLASLVAANLLGQNAPAIAAAEAEYEQIWAQDVAA TH_3772|M.thermoresistible__bu AEALGLDLQSQLEN----------------------------VLNNALAM MSMEG_0200|M.smegmatis_MC2_155 AQAAGIDPQSIATG----------------------------LLNEAIGS Mvan_3952|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_4141|M.abscessus_ATCC_1997 AVAATCT------------------------------------------- MMAR_3427|M.marinum_M --AYVQAEAAGAAALAG-----------ALGVPAT--------------- MUL_0967|M.ulcerans_Agy99 --SYVRAEAAAVKALAGLTEPVANLFAPVLSGPES--------------- Mb2640|M.bovis_AF2122/97 MFGYHSAASAVATQLAPIQEGLQQQLQNVLAQLASGNLGSGNVGVGNIGN Rv2608|M.tuberculosis_H37Rv MFGYHSAASAVATQLAPIQEGLQQQLQNVLAQLASGNLGSGNVGVGNIGN TH_3772|M.thermoresistible__bu LLGPVFGTLGQIPLDLDLVGLVGGLLDQKITAELADTLRPVLEGLEDLPF MSMEG_0200|M.smegmatis_MC2_155 VLG---GTLDQLP--IDLTGVLQPLLAQVLTPLVSEILG-------ELP- Mvan_3952|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_4141|M.abscessus_ATCC_1997 -------------------------------------------------- MMAR_3427|M.marinum_M -------------------------------------------------- MUL_0967|M.ulcerans_Agy99 -------------------------------------------------- Mb2640|M.bovis_AF2122/97 DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGF Rv2608|M.tuberculosis_H37Rv DNIGNANIGFGNRGDANIGIGNIGDRNLGIGNTGNWNIGIGITGNGQIGF TH_3772|M.thermoresistible__bu LGSILGDILGPILGGNGNNGLVDMVLGELLGDIIGGILPGAELDLDSLGG MSMEG_0200|M.smegmatis_MC2_155 IGGALGDALIGVVAG-----LVVSTLALELSDLG---------AIDNVGA Mvan_3952|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_4141|M.abscessus_ATCC_1997 -------------------------------------------------- MMAR_3427|M.marinum_M SAAAPAATIP--PFPANLTTLVMGGTGIPIPGPGFINLANELYVR----S MUL_0967|M.ulcerans_Agy99 VAASATALLSGAPLKPVEAALILSESGVPTPSASYISDVYTKYVEPNFPS Mb2640|M.bovis_AF2122/97 GKPANPDVLVVGNGGPGVTALVMGGTDSLLSLPNIPLLEYAARFITPVHP Rv2608|M.tuberculosis_H37Rv GKPANPDVLVVGNGGPGVTALVMGGTDSLLPLPNIPLLEYAARFITPVHP TH_3772|M.thermoresistible__bu LLGLLGLDLSQPLNLS-NLNLGLNLVTTGPLFTALKLFGADLGWEPALPN MSMEG_0200|M.smegmatis_MC2_155 LLAALGLDLSNPLNLSGDPIPGLNLVTTGSPFTFLKLFGVDLGWVPPFPN Mvan_3952|M.vanbaalenii_PYR-1 -MADLDELYGEIPTRQIAARLGADEAEVSSAVKTLLPVLVGGLQQNALDP MAB_4141|M.abscessus_ATCC_1997 VLAPLAMESRTIASTLASYVIGIGGNNDGASANIPRKLGG--------AY . MMAR_3427|M.marinum_M ANALLGLNTPEELYPLTGTKS----------------------------- MUL_0967|M.ulcerans_Agy99 ATAPQGVSTPNGLYPFTGIKD----------------------------- Mb2640|M.bovis_AF2122/97 GYTATFLETPSQFFPFTGLNS----------------------------- Rv2608|M.tuberculosis_H37Rv GYTATFLETPSQFFPFTGLNS----------------------------- TH_3772|M.thermoresistible__bu AVAREINETEYLNVGLLSLLN----------------------------- MSMEG_0200|M.smegmatis_MC2_155 PVAEDINNTEYLKVGLAGLLENLGIELDPIDLDILDLNLLGVDLSVLESV Mvan_3952|M.vanbaalenii_PYR-1 GTASTIASAAN---SHAGLLDG---------------------------- MAB_4141|M.abscessus_ATCC_1997 SVDYHPVSYPGAIWPVSGLTAP---------------------------- . . MMAR_3427|M.marinum_M ---------------------------LTLDASVSEGLTILDNAIMEQLA MUL_0967|M.ulcerans_Agy99 ---------------------------LSLDISLARGATILNDAILQQLA Mb2640|M.bovis_AF2122/97 ---------------------------LTYDVSVAQGVTNLHTAIMAQLA Rv2608|M.tuberculosis_H37Rv ---------------------------LTYDVSVAQGVTNLHTAIMAQLA TH_3772|M.thermoresistible__bu --------------------------TLGLEDLSAALGDLP---IVGDLP MSMEG_0200|M.smegmatis_MC2_155 LDGLGLGLDLGNSGGLLGGLLGGLGLDLGLDLDALGLGTLDPNEILNLLP Mvan_3952|M.vanbaalenii_PYR-1 ----------------------------GVDVDQVDEVDGSK-------- MAB_4141|M.abscessus_ATCC_1997 ----------------------------TFKTSVAQGRTNLNDEIVTAGN . MMAR_3427|M.marinum_M IP--GNTVTVFGVSQSAVIASLEMQKLAALGPAA-------------PTA MUL_0967|M.ulcerans_Agy99 ALPAGSSVAVLGYSQSAVLSSRVMPKLLAEG----------------VTS Mb2640|M.bovis_AF2122/97 AG---NEVVVFGTSQSATIATFEMRYLQSLPAHLR------------PGL Rv2608|M.tuberculosis_H37Rv AG---NEVVVFGTSQSATIATFEMRYLQSLPAHLR------------PGL TH_3772|M.thermoresistible__bu DLIALRVPIVIGVGLGAFAAGAAYNQVVADLANQPGGVN--GAESLLGSY MSMEG_0200|M.smegmatis_MC2_155 DVVALRIPIVVGFQLGAFAAGAAYQQVVDELPNQPGGANYQGTNPLLGSF Mvan_3952|M.vanbaalenii_PYR-1 -----AVAKIFGGNDTGQVASALS-------------------------- MAB_4141|M.abscessus_ATCC_1997 QP-----ITIVGYSLGAVVVSKSHSDLLQRYP---------------GGN :.* . MMAR_3427|M.marinum_M SQLNFVLLGNEMNPNGGLLARFPDLSIPSLGLTFYGGTPSDTIYP----- MUL_0967|M.ulcerans_Agy99 SQVNFVLLGNPMNPNGGVLARFPDLTLPSLGFTFYGATP-DNAFP----- Mb2640|M.bovis_AF2122/97 DELSFTLTGNPNRPDGGILTRFG-FSIPQLGFTLSGATP-ADAYP----- Rv2608|M.tuberculosis_H37Rv DELSFTLTGNPNRPDGGILTRFG-FSIPQLGFTLSGATP-ADAYP----- TH_3772|M.thermoresistible__bu TILPMILLRNPGRANGGLFARMYPLAGLFGIDTVTPETSAQSSGGTVPVL MSMEG_0200|M.smegmatis_MC2_155 TILPMVLIDNPGRANGGLFARAYPLFRLMGIDTVTPDTQVQSSTSGDSLL Mvan_3952|M.vanbaalenii_PYR-1 ---------GGGAGNSDLINRLLPILAPIVLAYIGRKLSGGQAQP----- MAB_4141|M.abscessus_ATCC_1997 PNIQFVLMGSANTPNGGIFARFPWLKIPLADIESNGAWEPDQFKT----- . :..:: * : MMAR_3427|M.marinum_M ------------------TANYTLEYDGFADFPRYPLNFISDLNAVMGIV MUL_0967|M.ulcerans_Agy99 ------------------TVSYTLEYDGFADFPRYPINLLADINAVMGIP Mb2640|M.bovis_AF2122/97 ------------------TVDYAFQYDGVNDFPKYPLNVFATANAIAGIL Rv2608|M.tuberculosis_H37Rv ------------------TVDYAFQYDGVNDFPKYPLNVFATANAIAGIL TH_3772|M.thermoresistible__bu G----TGLTVGGANLIPVKIDATAEYDFLSDFAAWPNPFSMANNVAALLF MSMEG_0200|M.smegmatis_MC2_155 NNIQLLGLTVGGANLIPIKVDATAEYLPLSDFAAWPNPFTMTNNVAAALF Mvan_3952|M.vanbaalenii_PYR-1 ----------------------------------QGQSGGGLGDILGGIL MAB_4141|M.abscessus_ATCC_1997 -------------------KVINTEYDTYGDFPAYFNP-LALANSIAAIQ : : MMAR_3427|M.marinum_M YVH--PTYLDLTQAQVDNAIPLATSPGY-----------------SGVTS MUL_0967|M.ulcerans_Agy99 FVH--ADYQDLTQAQLDSAVQLPTEG-------------------PTQST Mb2640|M.bovis_AF2122/97 FLH--SGLIALPPDLASGVVQPVSSP-------------------DVLTT Rv2608|M.tuberculosis_H37Rv FLH--SGLIALPPDLASGVVQPVSSP-------------------DVLTT TH_3772|M.thermoresistible__bu PTY--LLRGLSALDLVDSLGEQLTPQLAQILDNVLQ-----LDEALAINL MSMEG_0200|M.smegmatis_MC2_155 PTY--ILRNQSIPGVITDLTGQVVGQLLGDLADYVADPGDDPTKGPKLNI Mvan_3952|M.vanbaalenii_PYR-1 GGG--GQRGAGADNPLGSILGSVLGG------------------------ MAB_4141|M.abscessus_ATCC_1997 YAHPDAYYDRIDPAALDDPDNPNVVKT-----------------VQGNTT . MMAR_3427|M.marinum_M YYILPTENLPLLEPLRAIP----------VIGNPLANLIQPDLKVLVNLG MUL_0967|M.ulcerans_Agy99 YYMIPTEHLPLLAPLRFIP----------YVGDPLAELLEPNLRVLVNFG Mb2640|M.bovis_AF2122/97 YILLPSQDLPLLVPLRAIP----------LLGNPLADLIQPDLRVLVELG Rv2608|M.tuberculosis_H37Rv YILLPSQDLPLLVPLRAIP----------LLGNPLADLIQPDLRVLVELG TH_3772|M.thermoresistible__bu YLTLPMNTLPLLEPLYLATDFINLFTPGFDVNNPIATALNPVLTSLVNLG MSMEG_0200|M.smegmatis_MC2_155 YYTLDAKSLPLLEPTYLAVDVINLFT-GLNLNNPIGTALSPALTTLVNLG Mvan_3952|M.vanbaalenii_PYR-1 -----------------------------DKGGPLGDILGGLLGGKK--- MAB_4141|M.abscessus_ATCC_1997 YYLVRAEHLPLLQPLRDLTN--------PIGASFVLDAIEPTLRVFIDMA . : : * MMAR_3427|M.marinum_M YGDP---------AYGYSTSPADITTPFGLFP-DVPPHVIADALVAGTKQ MUL_0967|M.ulcerans_Agy99 YGDP---------AYGYDTGPANVPTPFGLFP-PVSPLTVAEHLAAGTQQ Mb2640|M.bovis_AF2122/97 YDR---------------TAHQDVPSPFGLFP-DVDWAEVAADLQQGAVQ Rv2608|M.tuberculosis_H37Rv YDR---------------TAHQDVPSPFGLFP-DVDWAEVAADLQQGAVQ TH_3772|M.thermoresistible__bu YTDVYWDDAKG--QYDRTLLEADIPTGFGTLPADVNWLEVPGNLFASLMR MSMEG_0200|M.smegmatis_MC2_155 YTDVRRVETADGVEYVRDFDDSDIPTAFGSFP-DVEWAKVPGDVVTQLVR Mvan_3952|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_4141|M.abscessus_ATCC_1997 YDR---------------DTGPGTTTQFSFFTPSKNIVDAFNKLPTAIAE MMAR_3427|M.marinum_M GISDFSAD------------------------------------------ MUL_0967|M.ulcerans_Agy99 GIVNSGAA------------------------------------------ Mb2640|M.bovis_AF2122/97 GVNDALSG------------------------------------------ Rv2608|M.tuberculosis_H37Rv GVNDALSG------------------------------------------ TH_3772|M.thermoresistible__bu GVQDAFEEGLIGPE-GSNVLRTLLGLIGLDLGGLGAGAAGLSMDGLPELL MSMEG_0200|M.smegmatis_MC2_155 GVQKAVGDGLVNQSPVPSPLTTLLGLLGLGN----ALPSGGSVLNLPDLN Mvan_3952|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_4141|M.abscessus_ATCC_1997 GAHNVENG------------------------------------------ MMAR_3427|M.marinum_M -------------IQQMFSQPATLPSPPMLQAPDLMAALAAAPTPVEVVN MUL_0967|M.ulcerans_Agy99 -------------LQAQG--PPSIPLSDIAHTLTANPPWAGTPALPPSTS Mb2640|M.bovis_AF2122/97 -------------LGLPPPWQPALPRLF---------------------- Rv2608|M.tuberculosis_H37Rv -------------LGLPPPWQPALPRLF---------------------- TH_3772|M.thermoresistible__bu RDAVEDAVGGLGELGGVSPLSSSQPEAAAVPDLGADTLTLKTGQRAAALN MSMEG_0200|M.smegmatis_MC2_155 ---------GLLPTAGTTNVAARQSEPNTKFEPQAITETKATDPDTTVLN Mvan_3952|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_4141|M.abscessus_ATCC_1997 -------LAGATPKQSASPEKPASPPVPQPGPTNPGSATTQIPAPEAPTP MMAR_3427|M.marinum_M TLTKIVSDDYATLLPLADIGTAFVITMPTYDATLFVDQLLQGNLINAFGY MUL_0967|M.ulcerans_Agy99 PASSIEDFILAVQAANSSISRGFVKTLSTAYATLLPTTDIASELVFTL-- Mb2640|M.bovis_AF2122/97 -------------------------------------------------- Rv2608|M.tuberculosis_H37Rv -------------------------------------------------- TH_3772|M.thermoresistible__bu ESDGAGLKENSEQPQDAAGEKTVIDTSTGDESPQPTPDAPREDAIKPPSS MSMEG_0200|M.smegmatis_MC2_155 LPSPQEKTTVPEPTKKVGGEVKKVVADIDEARAEIEAKVKKANERAKAS- Mvan_3952|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_4141|M.abscessus_ATCC_1997 SVVSLSTAEPPAPPASAKAADPTAISVSTAGASTARDQDFQPDTKPDPKS MMAR_3427|M.marinum_M PIAADVGLTAISGGVVALVAIGTLQSNIKDLQSLFP-------------- MUL_0967|M.ulcerans_Agy99 ---PSYNLNLFLDGVIQAING----QPIGD-------------------- Mb2640|M.bovis_AF2122/97 -------------------------------------------------- Rv2608|M.tuberculosis_H37Rv -------------------------------------------------- TH_3772|M.thermoresistible__bu KLRTGSNGRGEVRTGLGAPGKHLQQSTERLGQRLQDRADKINDGLRNAGA MSMEG_0200|M.smegmatis_MC2_155 ----AEKARERTQKAVKDAQDRVNKIADNGRKQIKAVADGVEKAVKDTKQ Mvan_3952|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_4141|M.abscessus_ATCC_1997 TPPPTKDSVGEADKSKNTLKPTLRLPKLPVAQPGTAPKSPKFPSLKNHLK MMAR_3427|M.marinum_M --------------------------------------------- MUL_0967|M.ulcerans_Agy99 --------------------------------------------- Mb2640|M.bovis_AF2122/97 --------------------------------------------- Rv2608|M.tuberculosis_H37Rv --------------------------------------------- TH_3772|M.thermoresistible__bu GLRNGLTAGPSSKSQPKSQPKTAAKVGAGVGATSDSESGGDE--- MSMEG_0200|M.smegmatis_MC2_155 AVKK-ATAKPTKKTQAGSQNNDNDKK--------DKDAA------ Mvan_3952|M.vanbaalenii_PYR-1 --------------------------------------------- MAB_4141|M.abscessus_ATCC_1997 SVPGLSEKKNPAADASSKHSQPANAPAHTSDKTSDHASETGRGAA