For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3287 | - | - | 100% (498) | conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1980 | - | 9e-77 | 38.60% (487) | hypothetical protein Mb1980 |
M. gilvum PYR-GCK | Mflv_4014 | - | 3e-67 | 37.64% (457) | hypothetical protein Mflv_4014 |
M. tuberculosis H37Rv | Rv1945 | - | 7e-77 | 38.60% (487) | hypothetical protein Rv1945 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0394c | - | 1e-79 | 43.46% (405) | hypothetical protein MAB_0394c |
M. marinum M | MMAR_1523 | - | 2e-84 | 39.96% (493) | hypothetical protein MMAR_1523 |
M. avium 104 | MAV_4055 | - | 1e-156 | 54.99% (491) | hypothetical protein MAV_4055 |
M. smegmatis MC2 155 | MSMEG_2663 | - | 1e-50 | 31.76% (488) | hypothetical protein MSMEG_2663 |
M. ulcerans Agy99 | MUL_2371 | - | 2e-80 | 38.45% (489) | hypothetical protein MUL_2371 |
M. vanbaalenii PYR-1 | Mvan_3050 | - | 3e-73 | 37.33% (509) | hypothetical protein Mvan_3050 |
CLUSTAL 2.0.9 multiple sequence alignment TH_3287|M.thermoresistible__bu MGQQFVTAGAARARVGELLAAVDAA-----YAEMRALCLDEVGTGFRLEL MAV_4055|M.avium_104 MG-VFLSSEQARQRIGAALDAIDAA-----HDVLRRTSSDLVGTGFRIDV Mb1980|M.bovis_AF2122/97 ---MRS---DTREEISAALDAYHAS-----LSRVLDLKCDALTTPELLAC Rv1945|M.tuberculosis_H37Rv ---MRS---DTREEISAALDAYHAS-----LSRVLDLKCDALTTPELLAC MMAR_1523|M.marinum_M ---MSS---MSREEVVAAFDALDAV-----MARLQDLCFDGLTTPERLAL MUL_2371|M.ulcerans_Agy99 ---MHSNGCSDRESVVATLDRLDRA-----VDALVEVSFEALTTPERLRV MAB_0394c|M.abscessus_ATCC_199 ---------------MSPIDDLLTT-----ATAVVESSFDELNNPELLSA Mflv_4014|M.gilvum_PYR-GCK ----MAGLSVGRTSVRCMDGVAEAVGVIGEQLAVLAKAAEDLSHRELIGL Mvan_3050|M.vanbaalenii_PYR-1 -------MGCSREDVLGAFDALDAV-----VESILALDYDALSAAERVRL MSMEG_2663|M.smegmatis_MC2_155 --MIRTSVRYMAAEVGTALAALHAA-----MRDVLALPYTALSDADLLDV : : : TH_3287|M.thermoresistible__bu AERLETQCRINRGLMYRVFAQLADPPDEPAMVPA-VRDRLWARLRITPGE MAV_4055|M.avium_104 AERLETQDRTNRGLMYRFFGEIADPPDEAGSLPV-ARSMLWARLRVSPGE Mb1980|M.bovis_AF2122/97 LQRLEVERRRQGAAEHALINQLAGQACEEELGGT-LRTALANRLHITPGE Rv1945|M.tuberculosis_H37Rv LQRLEVERRRQGAAEHALINQLAGQACEEELGGT-LRTALANRLHITPGE MMAR_1523|M.marinum_M LQRCEVARRRLPSIEHPLINQLVEQAGEQELGGK-LAAVLAGRLRVSRGE MUL_2371|M.ulcerans_Agy99 LERLEVVARRLPAAQYALVNQLDEQPGEAELGGR-LAAVVASRLRITRSE MAB_0394c|M.abscessus_ATCC_199 LRQLEIAQRKITAASHTLTARLVQRGSPVALGGTSFAEVLARYLSITTAT Mflv_4014|M.gilvum_PYR-GCK LSELTTVLRSAPAVEHAVLARLLDETEPHHLGEASWKKVLTTSLRMSSAE Mvan_3050|M.vanbaalenii_PYR-1 EARLERNLRRIPTVEHELLASVIAETEPARLGEGSWKKVLTTALRISGAE MSMEG_2663|M.smegmatis_MC2_155 CAGIQDVRNLAPAVEHRAIAALSEQTTPAAIGAKSWPLVLATRLGISSKE . : : : * :: TH_3287|M.thermoresistible__bu VKRRLRVAALLRPRRRLSGPPLPPVLARVAGAVESGLLGEEHLRVITTVM MAV_4055|M.avium_104 LRRRFALAARIRPRRSLTGPPLDPELPALAAAVASGAVGEDHIRAVCAAV Mb1980|M.bovis_AF2122/97 ASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREGKIGREHIKEIQAFF Rv1945|M.tuberculosis_H37Rv ASRRIAEAEDLGERRALTGEPLPAQLTATAAAQREGKIGREHIKEIQAFF MMAR_1523|M.marinum_M ASRRLREAADLGPRRALTGEQLAPLLSATASAVRQGRIGAGHVRVIREFC MUL_2371|M.ulcerans_Agy99 AGRRVAEAAEVGPRRALSGQPVGPVLTATAAALRQGVVGEGHVRVIRDFF MAB_0394c|M.abscessus_ATCC_199 ARRRLADAAHLGPRRALTGEPLRPALPYVAHALREGRLGDEHVRIIRRFF Mflv_4014|M.gilvum_PYR-GCK AGRRLQRAKNLGPRRAMTGEPLAPVWESTAAAQAQGHLGEEHVEIIAKFH Mvan_3050|M.vanbaalenii_PYR-1 AGRRLKRAKTLGPRRGLTGTPLPPLWESTAAAQAQGLLSEEHVAVIAAFH MSMEG_2663|M.smegmatis_MC2_155 ARRRCADAAELGPRVSLTGEALAPKREHIAAAQADGALTPDHVTELFKFF ** * : * ::* : . * * .* : *: : TH_3287|M.thermoresistible__bu AALPSAVSVTDREAVEASLIAEAARSDAGIVRQVGRRIEEIFNPDG-HYD MAV_4055|M.avium_104 DALPCAVPRSAASDAERTLVRHAAKLDAAVITKLGRRIADYLNPDG-EFS Mb1980|M.bovis_AF2122/97 KELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG-NFS Rv1945|M.tuberculosis_H37Rv KELSAAVDLGIREAAEAQLAELATSRRPDHLHGLATQLMDWLHPDG-NFS MMAR_1523|M.marinum_M GQVPAEVDLETRERAEAHLARLAGQFRPDQLAKLAQRLMDCVNPDG-RYS MUL_2371|M.ulcerans_Agy99 RQLPAGVDVGTRDRAEAHLAKLATQFRPDQLARLAGRLMDCLNPDG-RHS MAB_0394c|M.abscessus_ATCC_199 DVLPDAVDADTREAAEKQLASMGTEFGPEQLRAGADRIAALVNPDG-RFS Mflv_4014|M.gilvum_PYR-GCK KKLPSWVDVDTRAAADAQLAHTGSGLGPEELAQVADRLLMMIDQDGPEPS Mvan_3050|M.vanbaalenii_PYR-1 KRLPAWVDIETRAEADRQLAHAGSGLDPEGLDEAAGVLLAMINPDGAQPC MSMEG_2663|M.smegmatis_MC2_155 TKCPDWVTYAEQCRLEEKLVTGAIGADPETVRQAVDHAVFLLDQDGPAPT . * : * . . : .. ** TH_3287|M.thermoresistible__bu DQDRARRRGIHLGDQQRDGMSAISGWIDPQLRAYLEAVTAAVR-PGRHLP MAV_4055|M.avium_104 DVDRARRRGLHLGPQGVDGMSRLSGLLDPETRAYFEAVASAVR-PGRHQP Mb1980|M.bovis_AF2122/97 DQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNP Rv1945|M.tuberculosis_H37Rv DQERARKRGITMGKQEFDGMSRISGLLTPELRATIEAVLAKLAAPGACNP MMAR_1523|M.marinum_M DEDRARRRGLTLGRQGRDGMSRISGWLTPEARAGLDAVLAKLAAPGMCNP MUL_2371|M.ulcerans_Agy99 DEDRARRRGLSLGRQGLDGMSRISGWLTPEARAGLEAVWAKLAAPGMCNP MAB_0394c|M.abscessus_ATCC_199 DIDRARRRGISIGRQGADGMSALSGLLDPETRAYFDAVLSKLAAPGMCDP Mflv_4014|M.gilvum_PYR-GCK EKEKATRFWVKLGTQQRDGGRTISGYVDAETSAYWEAVLAKEAAPGANMA Mvan_3050|M.vanbaalenii_PYR-1 DKERARKRGIRISKQHPDGTATISGTLTPEALAIWQAIFAKEAAPGANNP MSMEG_2663|M.smegmatis_MC2_155 DNPPTKPFGITFGPQQPDGSYHLRGKVSAEFKATFDPIDEKLAAPGMCNP : : : :. * ** : * : .: * :.: ** . TH_3287|M.thermoresistible__bu HTTTDTTGTTGTTETTGT------AGTAGTAATAADTAADGVGDIDTGGV MAV_4055|M.avium_104 E-----------------------------------------GGGDPRAR Mb1980|M.bovis_AF2122/97 DDQT--------------------------------PLVDDTPDADAVRR Rv1945|M.tuberculosis_H37Rv DDQT--------------------------------PVVDDTPDADAVRR MMAR_1523|M.marinum_M DDES--------------------------------PVVQAPAGADAVSR MUL_2371|M.ulcerans_Agy99 EDEA--------------------------------AVVDGPVSRDAADR MAB_0394c|M.abscessus_ATCC_199 RDES--------------------------------PMTEGEPDSAAAER Mflv_4014|M.gilvum_PYR-GCK EQ-------------------------------------------EKAG- Mvan_3050|M.vanbaalenii_PYR-1 ESEHTEDSTSGGAADDASDAPGDHAGAASSAASGASDAAEHDPQPERCGS MSMEG_2663|M.smegmatis_MC2_155 TDQTPCISG--------------------------------TPSQQQIDH TH_3287|M.thermoresistible__bu DLRSAAQRRHDGLTLGLKIAVASGRLGSHRGHPVTVIVRTTLGELNQAAH MAV_4055|M.avium_104 DERTPSQRCHDALKLGLEVAIASGGLGVHRGHPVTVIASTTLAELDQAAR Mb1980|M.bovis_AF2122/97 DTRSQAQRHHDGLLAGLRGLLASGELGQHRGLPVTVVVSTTLKELEAAT- Rv1945|M.tuberculosis_H37Rv DTRSQAQRHHDGLLAGLRGLLASGELGQHRGLPVTVVVSTTLKELEAAT- MMAR_1523|M.marinum_M DRRSVGQRHHDGLNAAVRALLASGDLGQHNGLPASIIVTTTLGELQRAC- MUL_2371|M.ulcerans_Agy99 DSRSVSQRQHDGFNAALRAVLASGELGQHNGLPASIIVSTTLKELEAAA- MAB_0394c|M.abscessus_ATCC_199 DTRTSAQRNHDGLRACLRSTLASGKLGAHRGLPVTVVVSTTLRELQSAA- Mflv_4014|M.gilvum_PYR-GCK DTRTQGQRNHDGLKAVLRRTLESGQLGSHNGLPVTVIVSTTLQELEKGA- Mvan_3050|M.vanbaalenii_PYR-1 DTRTQAQRNHDAFLAVGRRLLESGELGTHNGLPVTVIVSTTLQELEKGA- MSMEG_2663|M.smegmatis_MC2_155 DERGAPERRHDAMLTAMRLLLAHKDLGQINGLPATLLITTTLQELEKAA- * * :* **.: . : ** .* *.::: *** **: . TH_3287|M.thermoresistible__bu AVADPRVSMPGPARTGGTGVLPMRELIRMAADAIHYLAVFDDHTERPLYL MAV_4055|M.avium_104 AVADPSIPMPAPALTGGGSRLPMPDLIRMATKAIHYLAVFDEHTGRPLYL Mb1980|M.bovis_AF2122/97 ----------GKGVTGGGSRVPMSDLIRMASNAHHYLALF--DGAKPLAL Rv1945|M.tuberculosis_H37Rv ----------GKGVTGGGSRVPMSDLIRMASNAHHYLALF--DGAKPLAL MMAR_1523|M.marinum_M ----------GRGLTGGGTVLPISDVIRLARHAHHYLAVF--DRGKAVGL MUL_2371|M.ulcerans_Agy99 ----------GRGLTGGGTLLPMSDVIRLARHAHHYLAVF--DRGEAIGL MAB_0394c|M.abscessus_ATCC_199 ----------GRAISGSGNLVPIPDLIRMATHAFHYLTIFG-DDGRPLHL Mflv_4014|M.gilvum_PYR-GCK ----------GVAVTGGGSLLPIPELIRLAADAHHYLYVYDGHTGQSLYL Mvan_3050|M.vanbaalenii_PYR-1 ----------GVAVTGGGSLLPMPDLIRLAARAHHYLYVYDQHSGKSLYL MSMEG_2663|M.smegmatis_MC2_155 ----------GVAITAGGTKLSIPDLIRLASQALHYLAVYDEHTGVPLYL . . :.. :.: ::**:* * *** :: . .: * TH_3287|M.thermoresistible__bu GRQKRIATADQRLICYARDGGCTAPGCGEPGYHAETHHQP-AWEDGGLTD MAV_4055|M.avium_104 GRQKRVATADQRLICYARDRGCTRPNCLEPGYHCEVHHAP-DWADGGRTD Mb1980|M.bovis_AF2122/97 YHTKRLASPAQRIMLYAKDRGCSRPGCDAPAYHSEVHHVT-PWTTTHRTD Rv1945|M.tuberculosis_H37Rv YHTKRLASPAQRIMLYAKDRGCSRPGCDAPAYHSEVHHVT-PWTTTHRTD MMAR_1523|M.marinum_M YHAKRLATAGQRLVLYAKDRGCTRPGCDVPGYQCEVHHVA-AWATSGRTD MUL_2371|M.ulcerans_Agy99 YHAKRLATPGQRIVLYAKDRGCTRPGCDVAGYQCEVHHVA-AWAISGRTD MAB_0394c|M.abscessus_ATCC_199 GRSKRIATPDQRIVLHAKDRGCSAPGCTVPGYLCQVHHVD-DWRDDGPTD Mflv_4014|M.gilvum_PYR-GCK GRAKRLANAAQRIVMHARDRGCTRPGCTVPGYWCQAHHASADWKDDGHTD Mvan_3050|M.vanbaalenii_PYR-1 GRAKRLANAAQRIVLHARDRGCTRPGCTAPGYWCQAHHASADFVDGGLTN MSMEG_2663|M.smegmatis_MC2_155 GRARRTASAGQRLAIWARDRGCTRPGCTANGYRCQAHHATTDYAKGGLTD : :* *.. **: *:* **: *.* .* .:.** : *: TH_3287|M.thermoresistible__bu ADHLFFACGPHHSGLTEGR--WQATIT-PTGRLAWTN----DHHPPTVNH MAV_4055|M.avium_104 ADKLFFACGPDHGAVSRGE--WRTSVG-DDGRLAWTD----GNGPPQTNR Mb1980|M.bovis_AF2122/97 INDLTLACGPDNRLVEKG---WKTRKN-AKGDTEWLPPAHLDHGQPRINR Rv1945|M.tuberculosis_H37Rv INDLTLACGPDNRLVEKG---WKTRKN-AKGDTEWLPPAHLDHGQPRINR MMAR_1523|M.marinum_M IDQLTLACGPDHKLLEQG---WRTRKN-AHGDTEWLPPPHLDHGQPRTNT MUL_2371|M.ulcerans_Agy99 INQLTLACGPDHKLLEQG---WRTRKN-AHGDTEWLPPPHLDHGQPRTNS MAB_0394c|M.abscessus_ATCC_199 IDNLTFACGPHHRLLQQG---WTTRKRRSDGITEWIPPPHLDTGQSRTND Mflv_4014|M.gilvum_PYR-GCK IDDLTFACGPENRMIENTG--WTTAKN-SRNQTEWIPPPDLETGQHRVNG Mvan_3050|M.vanbaalenii_PYR-1 IDDLTLACPCDHRMLDNTG--WRTRKN-GKNQTEWLPPPDLDTGQHRVNG MSMEG_2663|M.smegmatis_MC2_155 ADALALACGCDNRLVGEAPNKWTTRIN-NHGQCEWIPPQLLDRGQHRTNT : * :** .: : . * : . * * TH_3287|M.thermoresistible__bu AHHPEELLRAHTDPPEDPG------------------------------- MAV_4055|M.avium_104 AHHPDELLRGDPDPPEND-------------------------------- Mb1980|M.bovis_AF2122/97 YHHPEKILCEPDDDEPH--------------------------------- Rv1945|M.tuberculosis_H37Rv YHHPEKILCEPDDDEPH--------------------------------- MMAR_1523|M.marinum_M YHHPEKLLRDSAADEGEEGG------------------------------ MUL_2371|M.ulcerans_Agy99 YHHPEKLLRDSADDDDEGHGAA---------------------------- MAB_0394c|M.abscessus_ATCC_199 HHHPERFIRRF--------------------------------------- Mflv_4014|M.gilvum_PYR-GCK YHHPERHLLPHEEGEDSSTSRDCDDP------------------------ Mvan_3050|M.vanbaalenii_PYR-1 HHHPERYLLPEDD-----LPEDDQGP------------------------ MSMEG_2663|M.smegmatis_MC2_155 YHHPETLLADIKSGFTDDTADSRSQTSKTTGSETHAKQAADTEPDTAIAR ***: : TH_3287|M.thermoresistible__bu -------------------------------------------------- MAV_4055|M.avium_104 -------------------------------------------------- Mb1980|M.bovis_AF2122/97 -------------------------------------------------- Rv1945|M.tuberculosis_H37Rv -------------------------------------------------- MMAR_1523|M.marinum_M -------------------------------------------------- MUL_2371|M.ulcerans_Agy99 -------------------------------------------------- MAB_0394c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4014|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_3050|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_2663|M.smegmatis_MC2_155 GNDLSDRPAIPPELLGQNHQQPNTNHHPDTERGDARNSGATGHNQDHSRK TH_3287|M.thermoresistible__bu ----------------------------- MAV_4055|M.avium_104 ----------------------------- Mb1980|M.bovis_AF2122/97 ----------------------------- Rv1945|M.tuberculosis_H37Rv ----------------------------- MMAR_1523|M.marinum_M ----------------------------- MUL_2371|M.ulcerans_Agy99 ----------------------------- MAB_0394c|M.abscessus_ATCC_199 ----------------------------- Mflv_4014|M.gilvum_PYR-GCK ----------------------------- Mvan_3050|M.vanbaalenii_PYR-1 ----------------------------- MSMEG_2663|M.smegmatis_MC2_155 NGDRNSGDASKGNNGNADGDDGESDCHPA