For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3217 | - | - | 100% (401) | putative acyl-CoA dehydrogenase |
M. thermoresistible (build 8) | TH_3935 | - | 4e-54 | 35.03% (394) | PUTATIVE putative acyl-CoA dehydrogenase domain protein |
M. thermoresistible (build 8) | TH_4247 | - | 6e-54 | 35.56% (405) | PUTATIVE putative putative acyl-CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1969c | fadE17 | 4e-55 | 36.10% (410) | acyl-CoA dehydrogenase FADE17 |
M. gilvum PYR-GCK | Mflv_1792 | - | 0.0 | 80.31% (391) | acyl-CoA dehydrogenase domain-containing protein |
M. tuberculosis H37Rv | Rv1934c | fadE17 | 4e-55 | 36.10% (410) | acyl-CoA dehydrogenase FADE17 |
M. leprae Br4923 | MLBr_00737 | fadE25 | 7e-16 | 24.35% (345) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_0597 | - | 2e-49 | 32.18% (404) | acyl-CoA dehydrogenase FadE |
M. marinum M | MMAR_3981 | fadE17_2 | 1e-120 | 53.94% (393) | acyl-CoA dehydrogenase FadE17_2 |
M. avium 104 | MAV_1629 | - | 1e-122 | 54.71% (393) | putative acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_5622 | - | 0.0 | 81.38% (392) | putative acyl-CoA dehydrogenase |
M. ulcerans Agy99 | MUL_3842 | fadE17_2 | 1e-120 | 54.20% (393) | acyl-CoA dehydrogenase FadE17_2 |
M. vanbaalenii PYR-1 | Mvan_4958 | - | 0.0 | 79.80% (396) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb1969c|M.bovis_AF2122/97 ---MDVSYPPEAEAF--------RDRIREFVAEHLPPGWPGPGAL--PPH Rv1934c|M.tuberculosis_H37Rv ---MDVSYPPEAEAF--------RDRIREFVAEHLPPGWPGPGAL--PPH MAB_0597|M.abscessus_ATCC_1997 MVESQVSPAPAGEPMSEMSDDQVRTEIREWLAENLVGEFAELKGLGGPGS TH_3217|M.thermoresistible__bu -MTLNFDMGADAARL--------RGELRQLIAEHVPAGYLG-----AFTD MSMEG_5622|M.smegmatis_MC2_155 ---MDFDLGEDANRL--------RGELRALIDAHVPADFLG-----AFTD Mflv_1792|M.gilvum_PYR-GCK ---MDFDMGKGAADL--------RRELRALVGEHVPEHFLG-----AFTD Mvan_4958|M.vanbaalenii_PYR-1 ---MDFDMGKRASDL--------RRELRDLVNERVPERFLG-----AFTD MMAR_3981|M.marinum_M ---MDYDLGDDARQL--------RDRLRRLISEHIPDDFLG-----ACTT MUL_3842|M.ulcerans_Agy99 ---MDYDLGDDARQL--------RDRLRRLISEHIPDDFLG-----ACTT MAV_1629|M.avium_104 ---MDYDLGDDAAQL--------RSHLRELVANHIPADFLG-----ACTE MLBr_00737|M.leprae_Br4923 --MVGWSGNPLFDLFKLP---EEHNELRATIRALAEKEIAP-----HAAD . : : .:* : Mb1969c|M.bovis_AF2122/97 EREEFAR--HWRRALAGAGLVAVSWPTEYGGGGLSPMEQVVLAEEFARAG Rv1934c|M.tuberculosis_H37Rv EREEFAR--HWRRALAGAGLVAVSWPTEYGGGGLSPMEQVVLAEEFARAG MAB_0597|M.abscessus_ATCC_1997 EHEAFEERLAWNRHLAAAGWTCLGWPVEHGGRGATVSQRVIFYEEYARAE TH_3217|M.thermoresistible__bu DPADLEVAQQFCRTLAERNLLCLSWPSEYGGGDASVWEQTVVREEMWAHH MSMEG_5622|M.smegmatis_MC2_155 DPADLAVAQQFCRTLAERQLLCMSWPREFGGGDASVWEQTVVREEMWAHH Mflv_1792|M.gilvum_PYR-GCK DPADLDTAQRFCRMLAERNLLCMAWPEEFGGSGASVWEQTVVREEMWAHH Mvan_4958|M.vanbaalenii_PYR-1 DPADLETAQAFCRTLAERNLLCLAWPEEFGGGGASVWEQTVVREEMWAHH MMAR_3981|M.marinum_M DPQDLATTESFCKLLAAEDLLALAWPKEHGGGGGSIWQQTVLREEMWARH MUL_3842|M.ulcerans_Agy99 DPQDLATTESFCKLLAAEDLLALAWPEEHGGGGGSIWQQTVLREEMWARH MAV_1629|M.avium_104 NPQDLATTETFCKLLAAEGLLALAWPKEHGGGGGSVWQQTVLREEMWAQH MLBr_00737|M.leprae_Br4923 VDQRARFPEEALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVD * .: * *.** . :. ** Mb1969c|M.bovis_AF2122/97 APERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGEHRWCQGFSEPE Rv1934c|M.tuberculosis_H37Rv APERAENDLLGIDLLGNTLIALGSEAQKRHFLPRILSGEHRWCQGFSEPE MAB_0597|M.abscessus_ATCC_1997 APHKVN--HLGEELLGPTLIAYGTPEQQQRFLPAIRDVTELWCQGYSEPG TH_3217|M.thermoresistible__bu EPRGAQ--YMGVNWVGPIIMRHGTEEQQRTHLPPIARGEVIWCQGFSEPE MSMEG_5622|M.smegmatis_MC2_155 EPRGAQ--YMGVNWVGPIIMRYGTEEQQRKHLPPIANGEVIWCQGFSEPE Mflv_1792|M.gilvum_PYR-GCK EPRGAQ--YMGVNWVGPIIMRHGTEEQQRRHLPPIAAGEVIWCQGFSEPE Mvan_4958|M.vanbaalenii_PYR-1 EPRGAQ--YMGVNWVGPIIMRHGTEAQQLRHLPPIAAGEVIWCQGFSEPE MMAR_3981|M.marinum_M EPRGPQ--YMGINWVGPAIMRYGTPAQKTQHLSAIAAGEVVWCQGFSEPE MUL_3842|M.ulcerans_Agy99 EPRGPQ--YMGINWVGPAIMRYGTPAQKTRHLSAIAAGEVVWCQGFSEPE MAV_1629|M.avium_104 EPRGPQ--YMGINWVGPALMRYGTEEQKTKHLAAIAAGDVIWCQGFSEPE MLBr_00737|M.leprae_Br4923 ASASLIPAVNKLGTMG--LILRGSEELKKQVLPSLAAEGAMASYALSERE . :* :: *: : *. : . . ** Mb1969c|M.bovis_AF2122/97 AGSDLASVRTRGVLDGDE---WVINGHKIWTSAGTTANWIFLLARTDPS- Rv1934c|M.tuberculosis_H37Rv AGSDLASVRTRGVLDGDE---WVINGHKIWTSAGTTANWIFLLARTDPS- MAB_0597|M.abscessus_ATCC_1997 AGSDLANVSTSAVLDGGD---WVINGQKVWTSLALQSQWCFVVARTEPG- TH_3217|M.thermoresistible__bu AGSDLASLRTFARRAGDNPTGWLVNGQKIWTSYATMAQWCFLLARTTRVG MSMEG_5622|M.smegmatis_MC2_155 AGSDLASLRTSARRVDD---GWRINGQKIWTSYATMAQWCFLLARTSKG- Mflv_1792|M.gilvum_PYR-GCK AGSDLASLRTYAR--ADGD-GWLVSGQKIWTSYATMAQWCFLLARTSRLG Mvan_4958|M.vanbaalenii_PYR-1 AGSDLASLRTYARRAEDGD-GWLVSGQKIWTSYATMAQWCFLLARTSRVG MMAR_3981|M.marinum_M AGTDLASLRTRAVPEAPDGPGWRITGQKVWTSYAQMASWCVLAACTHPD- MUL_3842|M.ulcerans_Agy99 AGTDLASLRTRAVPEAPDGPGWRITGQKVWTSYAQMASWCVLAACTHPD- MAV_1629|M.avium_104 AGTDLVSLRTRAV---ADGDGWRITGQKVWTSYALMASWCVLAACTDPD- MLBr_00737|M.leprae_Br4923 AGSDAASMRTRAKADGDD---WILNGFKCWITNGGKSTWYTVMAVTDPD- **:* ..: * . * :.* * * : . : * : * * Mb1969c|M.bovis_AF2122/97 ----AAKHRGLSFLLVPMDQPGVVVRPIVNAAGH--SSFSEVFLTDARTS Rv1934c|M.tuberculosis_H37Rv ----AAKHRGLSFLLVPMDQPGVVVRPIVNAAGH--SSFSEVFLTDARTS MAB_0597|M.abscessus_ATCC_1997 ----SSRHKGLSYLLVPLDQPGVEIRPIIQLTGT--SEFNEVFFDNARTS TH_3217|M.thermoresistible__bu DGGVQRKQQGLTVFLVPMDRPGIQVRPIRTMMGP--HHLNEVFFDDVPVT MSMEG_5622|M.smegmatis_MC2_155 ----EKKQQGLTIFLVSMDDPAITVRPIRTMMGP--HHLNEVFFDDLEVT Mflv_1792|M.gilvum_PYR-GCK EGATQKKQQGLTIFLVPMDDPAITVRPIRTMLGP--HHLNEVFFDDLRVT Mvan_4958|M.vanbaalenii_PYR-1 EGATQKKQQGLTIFLVPMDDPAITVRPIRTMLGP--HHLNEVFFDDLRVT MMAR_3981|M.marinum_M ----APKPKRLTLFLLPMDRPGFTVRPIPSMLGP--HHLNEMFLDEVPAS MUL_3842|M.ulcerans_Agy99 ----ARKPKRLTLFLLPMDRPGFTVRPIPSMLGP--HHLNEMFLDEVPAS MAV_1629|M.avium_104 ----APKHKRLTLFLIPMDRPGFTVRPIPSMLGP--HHLNEMFLDDVPAY MLBr_00737|M.leprae_Br4923 -----KGANGISAFIVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIP . :: ::: * .. : * * .*::: . Mb1969c|M.bovis_AF2122/97 AGNVVGRVGDGWSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGL Rv1934c|M.tuberculosis_H37Rv AGNVVGRVGDGWSTAMTLLGFERGSHIATAAIDFERDLQRLCELARDRGL MAB_0597|M.abscessus_ATCC_1997 ADLVVGEPGDGWRVAMGTLTFERGVSTLGNQITYARELSRLAELAKSNGA TH_3217|M.thermoresistible__bu EADVLGTVDDGWSIVQDVMSFER--VGIARYARCERLLALAPQVLGEHWD MSMEG_5622|M.smegmatis_MC2_155 EADVLGTVDEGWKIVQDVVSFER--VGIARYARCERLLQAAPDVLGDAWD Mflv_1792|M.gilvum_PYR-GCK EADVLGTVDQGWSIVQDVMSFER--VGIARYARCERLLAAAPTVLGERWD Mvan_4958|M.vanbaalenii_PYR-1 EADVLGTVDAGWSIVQDVMAFER--VGIARYARCERLLAAAPGVLGDRWD MMAR_3981|M.marinum_M PTDVLGEPGDGWRVMREALAFER--VGIARYARCESLLDRMRTELGDDWA MUL_3842|M.ulcerans_Agy99 PSDVLGEPGDGWRVMREALAFER--VGIARYARCESLLDRMRTELGDDWA MAV_1629|M.avium_104 PGDVLGEVGDGWRVMREALAYER--VGIARYARCESLLERMRGRLGDEWE MLBr_00737|M.leprae_Br4923 GDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQ ::* . *: : . * * . Mb1969c|M.bovis_AF2122/97 HTDPRVRDGLAWCYARVQIMRYRGYRDLTLALTGRPPGAEAAITKVIWSE Rv1934c|M.tuberculosis_H37Rv HTDPRVRDGLAWCYARVQIMRYRGYRDLTLALTGRPPGAEAAITKVIWSE MAB_0597|M.abscessus_ATCC_1997 ADDPAIRERLAQAYVGMRTMR-----AYALATMDEERPGQDNVSKLLWAN TH_3217|M.thermoresistible__bu ALPAELHGRWARMLTHCRRARLLAYRVVALQAGGQVRPGDAAAYRIAVTR MSMEG_5622|M.smegmatis_MC2_155 QLPAELRGRWTRMLTHCRRARLMAYRVVAMQATGRVNPGDSAAYRIAVTR Mflv_1792|M.gilvum_PYR-GCK SLPTELRGRWIRMLTHCRRARLLAYRVVALQSSGRIAPGDAAAYRIAVTK Mvan_4958|M.vanbaalenii_PYR-1 SLPAELRGRWIGMLTHCRRARLLAYRVVALQSSGRITPGDASAYRIAVTK MMAR_3981|M.marinum_M RLPESIRVRWVRALADLRVARLLAYRAVALRDD-PTAGAAASAARIVTTT MUL_3842|M.ulcerans_Agy99 RLPESSRVRWVRALADLRVARLLAYRAVALRDD-PTSGAAASAARIVTTT MAV_1629|M.avium_104 QLPESIRARWVRALVDLRVARLLAYRAVSLQDD-PASGAAASAARIATTT MLBr_00737|M.leprae_Br4923 FGESISTFQSIQFMLADMAMKVEAARLIVYAAAARAERGEPDLG-FISAA : . . : Mb1969c|M.bovis_AF2122/97 YFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPNSPACWMDELLYA Rv1934c|M.tuberculosis_H37Rv YFRRYTDLAVEILGLEALGPRGPGNGGARLVPEAGTPNSPACWMDELLYA MAB_0597|M.abscessus_ATCC_1997 WHRDLGELAMEIIG------------TSTLLTNAGEMDE---WQRLFLFS TH_3217|M.thermoresistible__bu LDQDSAEVLMELVAALPPGDSADRQAAEYFRAEV---------EDHWRYS MSMEG_5622|M.smegmatis_MC2_155 LDQESAEVLMEIAAALPRGG---DQRTEYFRAEV---------EDHWRYS Mflv_1792|M.gilvum_PYR-GCK LDQDSAEVLMDIAAEVRHDD----ERAAWFLGEV---------DDHWRYS Mvan_4958|M.vanbaalenii_PYR-1 LDQDSAEVLMDIAAEVRRDD----HRAQWFLGEV---------EDHWRYS MMAR_3981|M.marinum_M CDQQVAELLLDVLGPAALDS----GTTAPLHGAI---------EDHWRYA MUL_3842|M.ulcerans_Agy99 CDQQVAELLLDVLGPAALDS----GATAPLHGAI---------EDHWRYA MAV_1629|M.avium_104 CDQQVAELLFDVLGPTALDA----GSGAPLHGAI---------EDHWRYA MLBr_00737|M.leprae_Br4923 SKCFASDIAMEVTTDAVQLFG-----GAGYTSDFP-------VERFMRDA :: .:: : Mb1969c|M.bovis_AF2122/97 RAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC--- Rv1934c|M.tuberculosis_H37Rv RAATIYAGSSQIQRNVIGERLLGLPKEPRPEVLC--- MAB_0597|M.abscessus_ATCC_1997 RADTIYGGSNEIQRNIISERVLGLPREAR-------- TH_3217|M.thermoresistible__bu QASTVSSGSIEMQRILLSRAMLATGKAPR-------- MSMEG_5622|M.smegmatis_MC2_155 QASTVSSGSIEMQRILLSRTMFAG--AAR-------- Mflv_1792|M.gilvum_PYR-GCK QASTVSSGSIEMQRILLSRAMLTADARSKSASVGAPR Mvan_4958|M.vanbaalenii_PYR-1 QASTVSSGSIEMQRILLSRAMLSAGAAK--------- MMAR_3981|M.marinum_M QAATVASGTIEVQRMLVARDVLGEHR----------- MUL_3842|M.ulcerans_Agy99 QAATVASGTIEVQRMLVARDVLGEHR----------- MAV_1629|M.avium_104 QAATVASGTIEVQKMLVARDVLGGHR----------- MLBr_00737|M.leprae_Br4923 KITQIYEGTNQIQRVVMSRALLR-------------- : : *: ::*: ::.. ::