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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3114 | - | - | 100% (403) | phage integrase family protein |
| M. thermoresistible (build 8) | TH_1542 | xerD | 4e-08 | 26.01% (373) | tyrosine recombinase XerD |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1727 | xerD | 1e-09 | 27.91% (369) | site-specific tyrosine recombinase XerD |
| M. gilvum PYR-GCK | Mflv_4645 | - | 3e-09 | 25.36% (347) | phage integrase family protein |
| M. tuberculosis H37Rv | Rv1701 | xerD | 1e-09 | 27.91% (369) | site-specific tyrosine recombinase XerD |
| M. leprae Br4923 | MLBr_01365 | xerD | 4e-07 | 30.65% (199) | site-specific tyrosine recombinase XerD |
| M. abscessus ATCC 19977 | MAB_0442 | - | 1e-167 | 70.00% (400) | putative transposase/integrase |
| M. marinum M | MMAR_2506 | xerD | 3e-10 | 28.03% (371) | integrase/recombinase, XerD |
| M. avium 104 | MAV_0505 | - | 1e-149 | 64.07% (398) | putative transposase |
| M. smegmatis MC2 155 | MSMEG_4155 | - | 4e-40 | 33.87% (375) | transposase A |
| M. ulcerans Agy99 | MUL_1690 | xerD | 2e-10 | 28.03% (371) | site-specific tyrosine recombinase XerD |
| M. vanbaalenii PYR-1 | Mvan_5418 | - | 0.0 | 83.12% (397) | phage integrase family protein |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_2506|M.marinum_M --------------------------------------------------
MUL_1690|M.ulcerans_Agy99 --------------------------------------------------
Mb1727|M.bovis_AF2122/97 --------------------------------------------------
Rv1701|M.tuberculosis_H37Rv --------------------------------------------------
MLBr_01365|M.leprae_Br4923 --------------------------------------------------
TH_3114|M.thermoresistible__bu --------------------------------MARTQRIALTDRPDTYTV
Mvan_5418|M.vanbaalenii_PYR-1 --------------------------------MARTQRIALAEDTDTFTV
MAB_0442|M.abscessus_ATCC_1997 MILSTPARAVRSSSWIEPDPAGRHKQAGSGSAVARTQRITLTGRAHTYTV
MAV_0505|M.avium_104 -------------------------------MVARSQRVSFGEGPDTYTV
MSMEG_4155|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4645|M.gilvum_PYR-GCK -------------------------------MTIQHQLRLQAGTDVAWVL
MMAR_2506|M.marinum_M MSTLTLDTQLQGYLDHLAIERGVAANTLSSYRRDLRRYSKHLEDRGITDL
MUL_1690|M.ulcerans_Agy99 MSTLTLDTQLQGYLDHLAIERGVAANTLSSYRRDLRRYSKHLEDRGITDL
Mb1727|M.bovis_AF2122/97 MKTLAL--QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDL
Rv1701|M.tuberculosis_H37Rv MKTLAL--QLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDL
MLBr_01365|M.leprae_Br4923 MTTAALQTQLQGYLDYLIIERSIAANTLSSYRRDLIRYSKHLSDRGIEDL
TH_3114|M.thermoresistible__bu LGADHLPVDPAEEYLQFLRDDAASPNTVKAYAAGLAAWWTLLEYTG-TDW
Mvan_5418|M.vanbaalenii_PYR-1 VGPDFLPIDPAEEFLQFLRDDEASPNTVKAYAAGLAAWWTVLEHTG-TDW
MAB_0442|M.abscessus_ATCC_1997 LGQDHLPIAPVTEYLQFLRDDQASPNTLRAYAAGLAAWWNLLEETN-TGW
MAV_0505|M.avium_104 VGDDGLPIGPAAEYLRFLRDGGASPHTVRAYAAGIADWFTVLSHTG-HVW
MSMEG_4155|M.smegmatis_MC2_155 -----MPVAPVERYLKYLTDIERSPNTIKAYAHDLKDWFTFLGGRG-LDW
Mflv_4645|M.gilvum_PYR-GCK SGPGCGKYALVNEYLRYLADRNYSPRTLRAYGYDLLAFCRWLGSVD-VEL
: :..*: :* .: : * .
MMAR_2506|M.marinum_M AKVGEDDVSEFLVALRRGDPE-----------SGVLGLSAVSAARALIAV
MUL_1690|M.ulcerans_Agy99 AKVGEDDVSEFLVALRRGDPE-----------SGVLGLSAVSAARALIAV
Mb1727|M.bovis_AF2122/97 AKVGEHDVSEFLVALRRGDPD-----------SGTAALSAVSAARALIAV
Rv1701|M.tuberculosis_H37Rv AKVGEHDVSEFLVALRRGDPD-----------SGTAALSAVSAARALIAV
MLBr_01365|M.leprae_Br4923 AKVGEHDVSEFLVALRRGDPD-----------SGVAALSAVSAARALIAV
TH_3114|M.thermoresistible__bu REVSTAMFGQFLAYLRSGDLP-----GTARIGAPPTWLGPASTQLRAAAV
Mvan_5418|M.vanbaalenii_PYR-1 REISTSLFGQFLAYLRTGDLP-----GTARIGAPEGWLGAASTALRAAAV
MAB_0442|M.abscessus_ATCC_1997 TDVTTALFGEFLTYLRTGDLP-----GTSRIGPPAVWLSAASVQQRAAAV
MAV_0505|M.avium_104 DDFPTTLFGQYLQFLRTGDLP-----GSARIGPPQQRLAASSLQPRAAAV
MSMEG_4155|M.smegmatis_MC2_155 QSVSLEDIGAFVVWLRLPTALR---QGGIAVLPSVEHHCGESTVNRKLSA
Mflv_4645|M.gilvum_PYR-GCK SSVTTETVLDFMRHCRQTPIAGRPTNVVSMTGTRLDRYSSTTINHRLAAL
.. . :: * . : :
MMAR_2506|M.marinum_M RGLHRFAAAEG-LAALDVARAVRP--------------------------
MUL_1690|M.ulcerans_Agy99 RGLHRFAAAEG-LAALDVARAVRP--------------------------
Mb1727|M.bovis_AF2122/97 RGLHRFAAAEG-LAELDVARAVRP--------------------------
Rv1701|M.tuberculosis_H37Rv RGLHRFAAAEG-LAELDVARAVRP--------------------------
MLBr_01365|M.leprae_Br4923 RGLHRFAVAEG-LVDLDVARAVRP--------------------------
TH_3114|M.thermoresistible__bu LACYRYHADAH-GLPVPYRRLFTSRGKRGRSR-YIPMLAGVGPPR-TKDR
Mvan_5418|M.vanbaalenii_PYR-1 LACYRYHADAH-GLVGPYQRLHTSRGKRGRSR-YIPMLAGVGAARPAKDR
MAB_0442|M.abscessus_ATCC_1997 LSFYRYHAHAH-NLDAPYQRLYGTLGKPGRAR-YIPLLAGVGRPV-RKPR
MAV_0505|M.avium_104 LSMYRYHADAH-HVDTPYRRLFTSRGSWRRYRRYVGFLDGVGPQR-RGDH
MSMEG_4155|M.smegmatis_MC2_155 LAAFYLHAVRD-GIDVG--ELLTTWQIGGSRGGWKPFLHHISKHMPSPRR
Mflv_4645|M.gilvum_PYR-GCK TGLFTFRELRDPGLRTPIPSGREARRVSAEER------NGLLGHLVRPKR
. . .
MMAR_2506|M.marinum_M -----PTPGRRLPKSLTIDEVLALLEGAGGDN----PADGPLTLRNRALL
MUL_1690|M.ulcerans_Agy99 -----PTPGRRLPKSLTIDEVLALLEGAGGDN----PADGPLTLRNRALL
Mb1727|M.bovis_AF2122/97 -----PTPSRRLPKSLTIDEVLSLLEGAGGDK----PSDGPLTLRNRAVL
Rv1701|M.tuberculosis_H37Rv -----PTPSRRLPKSLTIDEVLSLLEGAGGDK----PSDGPLTLRNRAVL
MLBr_01365|M.leprae_Br4923 -----PTPGRRLPKSLTVDEVLALLESVGGES----RADGPLVLRNRALL
TH_3114|M.thermoresistible__bu PVYTVRRGNLAATPVLLPSQVAAILDGCATQN-GHVWSGPASGLRDRLLF
Mvan_5418|M.vanbaalenii_PYR-1 PIYTVRRGNRAATPVLLPAQVGLILDGCATQT-GHEWSGPASGLRDRLLF
MAB_0442|M.abscessus_ATCC_1997 PIYRVRGGNTSRTPVLLPEQVRTILDLCAVQDRSGQWSGSPAALRDRLLF
MAV_0505|M.avium_104 PIYRMRTQNRCTTPVLTPPQVNTILDACSVQH-DGTWSGGPAAVRNRLLF
MSMEG_4155|M.smegmatis_MC2_155 TVS--LKAPKKLPRVLTPGEVQTLLDACDRLR-------------DRFLL
Mflv_4645|M.gilvum_PYR-GCK RSALRLREPRRLPRALNRRETAELLSSLRTWR-------------DRALA
. * :. :*. :* :
MMAR_2506|M.marinum_M ELLYSTGSRISEAVGLDVDDIDTQAR-------------TVLLQGKGGKQ
MUL_1690|M.ulcerans_Agy99 ELLYSTGSRISEAVGLDVDDIDTQAR-------------TVLLQGKGGKQ
Mb1727|M.bovis_AF2122/97 ELLYSTGARISEAVGLDLDDIDTHAR-------------SVLLRGKGGKQ
Rv1701|M.tuberculosis_H37Rv ELLYSTGARISEAVGLDLDDIDTHAR-------------SVLLRGKGGKQ
MLBr_01365|M.leprae_Br4923 ELLYSTGSRISEAVGLDVDDVDTQAR-------------TVLLQGKGGKQ
TH_3114|M.thermoresistible__bu ATLAETGMRLGEALSLRHHDFHLGTGATPYIEVGTRQDHPRGARGKTLHG
Mvan_5418|M.vanbaalenii_PYR-1 AVLAETGMRLGEALSLRHHDFHIGAGGTPWIDIAARQDHPRGARGKTLSP
MAB_0442|M.abscessus_ATCC_1997 ALLAETGMRMGEALTLRHHDVHIGAGGTPWVEVVPRQDHPAGVRVKGGH-
MAV_0505|M.avium_104 AVLAETGMRLGEALSLRHHDFHIGAGATPFIEIVDRQDHPHGVRVKTGS-
MSMEG_4155|M.smegmatis_MC2_155 ALLYDAGMRIGEALGLRHSDIAAAER----QVTVCRRDNDNRARAKSLTA
Mflv_4645|M.gilvum_PYR-GCK GLMLLSGLRSGELLTLDVTDVDIGAR-------------WVKVMGKGAKE
: :* * .* : * *. *
MMAR_2506|M.marinum_M RLVPVGRPAVQALDAYLVRGRPELARRGRG---TPAIFLNARGGR----L
MUL_1690|M.ulcerans_Agy99 RLVPVGRPAVQALDAYLVRGRPELARRGRG---TPAIFLNARGGR----L
Mb1727|M.bovis_AF2122/97 RLVPVGRPAVHALDAYLVRGRPDLARRGRG---TAAIFLNARGGR----L
Rv1701|M.tuberculosis_H37Rv RLVPVGRPAVHALDAYLVRGRPDLARRGRG---TAAIFLNARGGR----L
MLBr_01365|M.leprae_Br4923 RLVPVGRPAVQALDAYLVRGRSDLARRGPGMLATPAIFLNARGGR----L
TH_3114|M.thermoresistible__bu RRIYIGDDLEALYSSYVWHLVDHGADLAMPNLDTHFVFVNLVAGERFAPM
Mvan_5418|M.vanbaalenii_PYR-1 RRVYIGDDLEALYSSYVWHLIDHGADLAVPDLTTHFVFVNLTAGTPFAPT
MAB_0442|M.abscessus_ATCC_1997 RRIYVGDDLEALYSAYVWHLVDTGAHEHVPDLDTHFVFVNLAGGQLYAPT
MAV_0505|M.avium_104 RRVYVGDDLEALYSEYVWQLVAMAADVEVPDLASHFVFVNLAHGPRFAAM
MSMEG_4155|M.smegmatis_MC2_155 RIVPVSAELIRLYADYLHAEYG--------DLDSDYVFVNLWGRPHGHPL
Mflv_4645|M.gilvum_PYR-GCK RRVPLDVEVAGLIQTYLLVERPES--------DSNRLFLVAKGPHRGQPL
* : :. *: : :*:
MMAR_2506|M.marinum_M SRQSAWQVLQDAAERAG--ITSGVSPHMLRHSFATHLLEGGADVRVVQEL
MUL_1690|M.ulcerans_Agy99 SRQSAWQVLQDAAERAD--ITSGVSPHMLRHSFATHLLEGGADVRVVQEL
Mb1727|M.bovis_AF2122/97 SRQSAWQVLQDAAERAG--ITAGVSPHMLRHSFATHLLEGGADVRVVQEL
Rv1701|M.tuberculosis_H37Rv SRQSAWQVLQDAAERAG--ITAGVSPHMLRHSFATHLLEGGADVRVVQEL
MLBr_01365|M.leprae_Br4923 SRQSAWQVLQDAAEHAG--ITSGVSPHMLRHSFATHLLEGGADIRVVQEL
TH_3114|M.thermoresistible__bu RAETVYAKVDSLTRRSNGVLPEDWTPHWLRHTHATALLLSGAPPHVVMRR
Mvan_5418|M.vanbaalenii_PYR-1 RPETVYAKVDSVTSRAAGALPQGWSPHWLRHTHATALLLSGAAPHVVMRR
MAB_0442|M.abscessus_ATCC_1997 RPETVYAKVRSISHNAKGAVPKDWSPHWMRHTHATALLLSGVPPHVVMRR
MAV_0505|M.avium_104 RVETVYDKVRGIKR-AQPSLPAGWTPHWLRHTHATALLLAGVPEHVVMRR
MSMEG_4155|M.smegmatis_MC2_155 TYGAVYDLVRRLRR----RTAIDFDPHWLRHTAATRMLRDGIGLEVVAKL
Mflv_4645|M.gilvum_PYR-GCK TAAGLRTIFRYHRIKSG---VLAGHPHALRHTFGTAMAEAGVDLAVMQAL
. ** :**: .* : * *:
MMAR_2506|M.marinum_M LGHASVTTTQ-IYTLVTVHALREVWAGAHPRAT-----------
MUL_1690|M.ulcerans_Agy99 LGHASVTTTQ-IYTLVTVHALREVWAGAHPRAT-----------
Mb1727|M.bovis_AF2122/97 LGHASVTTTQ-IYTLVTVHALREVWAGAHPRAR-----------
Rv1701|M.tuberculosis_H37Rv LGHASVTTTQ-IYTLVTVHALREVWAGAHPRAR-----------
MLBr_01365|M.leprae_Br4923 MGHASVTTTQ-IYTLVTVQALREVWAGAHPRAK-----------
TH_3114|M.thermoresistible__bu LGHADIQTTLSTYGWVTEDAEMRTVAQWRNYVAGWKGLHHDDTP
Mvan_5418|M.vanbaalenii_PYR-1 LGHADIQTTLSTYGWVTEDAEMRTLAQWRNYVAGWKGLTP----
MAB_0442|M.abscessus_ATCC_1997 LGHQDIQTTLSTYGWVTEDAEMRSVAEWRNFVAGWKGLHDDPH-
MAV_0505|M.avium_104 LGHADVQTTLSTYGWVTQDAEMRSLASWKNYVAGWKGLHDGPP-
MSMEG_4155|M.smegmatis_MC2_155 LGHANVTVTAATYGHLNVEDARKAMEQAGWFIGKAQVKL-----
Mflv_4645|M.gilvum_PYR-GCK LGHAHIDTTA-RYIHLAPTHVKAEYDAARTRLRSHT--------
:** : .* * :