For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3057 | - | - | 100% (387) | acyl-CoA dehydrogenase domain protein |
M. thermoresistible (build 8) | TH_3553 | - | e-120 | 55.47% (384) | PUTATIVE acyl-CoA dehydrogenase domain protein |
M. thermoresistible (build 8) | TH_4562 | - | 3e-68 | 37.40% (393) | PUTATIVE FadE12_1 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0997c | fadE12 | 1e-121 | 55.76% (382) | acyl-CoA dehydrogenase FADE12 |
M. gilvum PYR-GCK | Mflv_4615 | - | 1e-127 | 59.27% (383) | acyl-CoA dehydrogenase domain-containing protein |
M. tuberculosis H37Rv | Rv0972c | fadE12 | 1e-121 | 56.02% (382) | acyl-CoA dehydrogenase FADE12 |
M. leprae Br4923 | MLBr_00737 | fadE25 | 5e-32 | 26.50% (366) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_2065c | - | 1e-128 | 60.52% (385) | acyl-CoA dehydrogenase FadE |
M. marinum M | MMAR_4535 | fadE12 | 1e-119 | 54.71% (382) | acyl-CoA dehydrogenase FadE12 |
M. avium 104 | MAV_1088 | - | 1e-119 | 54.71% (382) | acyl-CoA dehydrogenase fadE12 |
M. smegmatis MC2 155 | MSMEG_5494 | - | 1e-117 | 53.61% (388) | acyl-CoA dehydrogenase fadE12 |
M. ulcerans Agy99 | MUL_4707 | fadE12 | 1e-119 | 54.45% (382) | acyl-CoA dehydrogenase FadE12 |
M. vanbaalenii PYR-1 | Mvan_4850 | - | 1e-125 | 57.85% (382) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4615|M.gilvum_PYR-GCK ----------MELHETEERRALRKAVSEIAKDFGHDYYVAKSLGGEKSSE MAB_2065c|M.abscessus_ATCC_199 ----------MELHETEERQDLRKAVAEIAKDFGHEYYLEKSLAGAKSTE TH_3057|M.thermoresistible__bu --------MSGLLHETDEHRAIRETVAGIAQRYGVHYYLERGRAGGNIDE Mb0997c|M.bovis_AF2122/97 -------MTDTSFIESEERQALRKAVASWVANYGHEYYLDKARKHEHTSE Rv0972c|M.tuberculosis_H37Rv -------MTDTSFIESEERQALRKAVASWVANYGHEYYLDKARKHEHTSE MMAR_4535|M.marinum_M -------MTDTSFIENEDRRALRKAVSEWASNYGHEYYLKKARAHEHTTE MUL_4707|M.ulcerans_Agy99 ------MMTGTSFIENEDRRALRKAVSEWASNYGHEYYLKKARAHEHTTE MAV_1088|M.avium_104 -------MTDSSFIENEERQALRKAVAEWASNYGSEYYLRKARAHEHTNE MSMEG_5494|M.smegmatis_MC2_155 ---------MSGFVETEEQQALRRAVAAMAANYGQDYYLEKARAGQHTTE Mvan_4850|M.vanbaalenii_PYR-1 ---------MS-FIETDEQQALRKAVAAMAANYGQDYYLEKARAGQHTDE MLBr_00737|M.leprae_Br4923 MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAADVDQRARFPEE : :::. :* :: . : * Mflv_4615|M.gilvum_PYR-GCK LWHAVGEQGFLGINIAEEYGGGGGGIYDMQIVGEELAAAGCPLLMTVVSP MAB_2065c|M.abscessus_ATCC_199 LWQAVGKQGFLGVNLSEQYGGGGGGIYDMQIVGEELAAAGCPLLMTVVSP TH_3057|M.thermoresistible__bu LWKDLGAAGLLGVHLPEEYGGGGGGMAEAVIVVEELAAHGMPLLIWVISP Mb0997c|M.bovis_AF2122/97 LWAEAGKLGFLGVNLPEEYGGGGAGMYELSLVMEEMAAAGSALLLMVVSP Rv0972c|M.tuberculosis_H37Rv LWAEAGKLGFLGVNLPEEYGGGGAGMYELSLVMEEMAAAGSALLLMVVSP MMAR_4535|M.marinum_M LWSEAGKLGFIGVNLPEEYGGGGAGMYELSMVMEEMAAAGSALLLMVVSP MUL_4707|M.ulcerans_Agy99 LWSEAGKLGFIGVNLPEEYGGGGAGMYELSMVMEEMAAAGSALLLMVVSP MAV_1088|M.avium_104 LWSEAGKLGFLGVNLPEEYGGGGAGMYELSLVMEEMAAAGSALLLMVVSP MSMEG_5494|M.smegmatis_MC2_155 LWNEAGKLGFIGVNLPEEYGGGGAGMYELSLVMEEMAATGCALLMMVVSP Mvan_4850|M.vanbaalenii_PYR-1 LWSEAGKLGFIGVNLPEEYGGGGAGMYELSLVMEEMAAAGSSLLMMVVSP MLBr_00737|M.leprae_Br4923 ALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVN . *: .:::.*:*** *.. :* **:* . . : Mflv_4615|M.gilvum_PYR-GCK TICGTIIQAFGSDELKARWLPGIASGEVIMAFAITEPDAGSNSHNISTYA MAB_2065c|M.abscessus_ATCC_199 TICGTIIQAFGSEELKQQWLPGIASGETIMAFAITEPDAGSNSHNISTTA TH_3057|M.thermoresistible__bu AICGSILAHHGSDAMRKDWLPTIADGSRRMAFGLTEPDAGSNSHNVKTTA Mb0997c|M.bovis_AF2122/97 AINGTIIAKFGTDDQKKRWLPGIADGSLTMAFAITEPDAGSNSHKITTTA Rv0972c|M.tuberculosis_H37Rv AINGTIIAKFGTDDQKKRWLPGIADGSLTMAFAITEPDAGSNSHKITTTA MMAR_4535|M.marinum_M AINGTIISKFGTDEQKQRWLPGIADGTLTMAFAITEPDAGSNSHKITTTA MUL_4707|M.ulcerans_Agy99 AINGTIISKFGTDEQKQRWLPGIADGTLTMAFAITEPEAGSNSHKITTTA MAV_1088|M.avium_104 AINGTIISKFGTEEQKKRWLPGIADGTLTMAFAITEPDAGSNSHKITTTA MSMEG_5494|M.smegmatis_MC2_155 AINGTIISKFGTEEQKRRWLPGIADGSITMAFAITEPDAGSNSHRITTTA Mvan_4850|M.vanbaalenii_PYR-1 AINGTIISKFGTEEQKKRWIPGIADGSLTMAFAITEPDAGSNSHKITTTA MLBr_00737|M.leprae_Br4923 KLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRA : : *:: : :* :* ::.::* :***:: : * * Mflv_4615|M.gilvum_PYR-GCK KRVGGDWILNGTKYYISGVDEAEAILVVTRTATDDR-GRGRLSLLVVPTD MAB_2065c|M.abscessus_ATCC_199 KRDGDDWVINGTKYYISGVDEAEAILVVTRTSTNDS-GRGLLSLLVVPTD TH_3057|M.thermoresistible__bu RRTDSGWVISGSKYYISAVDESDAILLVTRDADLSTPEKSRLSLFVVPTD Mb0997c|M.bovis_AF2122/97 RRDGSDWIIKGQKVFISGIDQAQAVLVVGRSEEAKT-GKLRPALFVVPTD Rv0972c|M.tuberculosis_H37Rv RRDGSDWIIKGQKVFISGIDQAQAVLVVGRSEEAKT-GKLRPALFVVPTD MMAR_4535|M.marinum_M RRDGSDWIIKGQKVYISGIDQAQAVLVVGRTEEAKT-GKLRPALFVVPTD MUL_4707|M.ulcerans_Agy99 RRDGSDWIIKGQKVYISGIDQAQAVLVVGRTEEAKT-GKLRPALFVVPTD MAV_1088|M.avium_104 RRDGSDWILKGQKVFISGIDQAQAVLVVARTEEAKT-GKLRPALFVVPTD MSMEG_5494|M.smegmatis_MC2_155 RRDGSDWILKGQKVFISGIDQAQAVLVVGRTEDHKT-GNLKPALFVIPTD Mvan_4850|M.vanbaalenii_PYR-1 RRDGSDWVLSGQKVYISGVDQAQAVLVVGRTEDHKT-GSLKPALFVVPTD MLBr_00737|M.leprae_Br4923 KADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKG--ANGISAFIVHKD : ...*::.* * :*: .:: :: . : ::: .* Mflv_4615|M.gilvum_PYR-GCK APGLTKTLIPVQA-VTPEKQFTLFFDDVRVPAENLIGAENDGLRQVFMGL MAB_2065c|M.abscessus_ATCC_199 VPGLTKSLIPVQA-VTPEKQFTLFFDDVRVPAANLIGTENEGLRQVFMGL TH_3057|M.thermoresistible__bu APGLTYQQIPTSI-VSPDKQFTVFLDNVEVGEEALIGEAGNGLRQVFDGL Mb0997c|M.bovis_AF2122/97 APGFSYTPIEMEL-VSPERQFQVFLDDVRLPADALVGAEDAAIAHLFAGL Rv0972c|M.tuberculosis_H37Rv APGFSYTPIEMEL-VSPERQFQVFLDDVRLPADALVGAEDAAIAQLFAGL MMAR_4535|M.marinum_M TPGFTYTAIDMEL-VSPERQFQVFLDDVRLPADALVGAQDAAIAQLFAGL MUL_4707|M.ulcerans_Agy99 TPGFTYTAIDMEL-VSPERQFQVFLDDVRLPADALVGAQDAAIAQLFAGL MAV_1088|M.avium_104 APGFSATPIEMEL-ISPERQFQVFLDDVRLPSDALVGAEDAAIAQLFAGL MSMEG_5494|M.smegmatis_MC2_155 TPGLHWTKIEMEL-ISPESQFQVFLDDVRVPADALVGSEDAALAQLFAGL Mvan_4850|M.vanbaalenii_PYR-1 TPGFTYTKIPMEI-VSPEFQFQVFLDEVRLPADALVGSEDAAIAQLFAGL MLBr_00737|M.leprae_Br4923 DEGFSIGPKEKKLGIKGSPTTELYFDKCRIPGDRIIGEPGTGFKTALATL *: . :. . :::*. .: ::* . .: : * Mflv_4615|M.gilvum_PYR-GCK NPERIMGAALGNGIGRYALDKASAYARERKVWDVPIGAHQGLSHPLAHAK MAB_2065c|M.abscessus_ATCC_199 NPERIMGAALGNGIGRYALDKAADYARNRHVWGAPIGSHQGVSHPLAHAK TH_3057|M.thermoresistible__bu NPERIMVGALCGGIGRYAIGKAAEYAKERTVWSTPIGAHQGVAHPLAECH Mb0997c|M.bovis_AF2122/97 NPERIMGAASAVGMGRFALGRAVDYVKTRKVWSTPIGAHQGLAHPLAQCH Rv0972c|M.tuberculosis_H37Rv NPERIMGAASAVGMGRFALGRAVDYVKTRKVWSTPIGAHQGLAHPLAQCH MMAR_4535|M.marinum_M NPERIMGAASAVGMGRFALNRAVDYVKTRQVWSTPIGAHQGLAHPLAQCH MUL_4707|M.ulcerans_Agy99 NPERIMGAASAVGMGRFALNRAVDYVKTRQVWSTPIGAHQGLAHPLAQCH MAV_1088|M.avium_104 NPERIMGAASSVGMGRFALARAAEYVKTRQVWGTPVGAHQGLSHPLAQCH MSMEG_5494|M.smegmatis_MC2_155 NPERIMGAASAVGMGRFAIHKAVDYVKTRQVWKVPIGSHQGLSHPLAQNH Mvan_4850|M.vanbaalenii_PYR-1 NPERIMGAASAVGMGRFAIGRAVEYVKTRQVWKTPIGAHQGLSHPLAQNH MLBr_00737|M.leprae_Br4923 DHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQFMLADMA : * .* *:.: *: * *.: * : .:.:.*.: . **. Mflv_4615|M.gilvum_PYR-GCK IQLELARLMTQRAASLHDADDPG-SAEASNMAKYAAAEAGILALDQAIQT MAB_2065c|M.abscessus_ATCC_199 IQVELARLMTQRAAALHDAGDPG-SGEASNMAKYAAAEAGILALDQAIQT TH_3057|M.thermoresistible__bu IAVELSRLVTARSAELFDAGEP--AGEAANIAKFAASEAALKALDQAIQT Mb0997c|M.bovis_AF2122/97 IEVELAKLMTQKAATLYDHGDDFGAAEAANMAKYAAAEASSRAVDQAVQS Rv0972c|M.tuberculosis_H37Rv IEVELAKLMTQKAATLYDHGDDFGAAEAANMAKYAAAEASSRAVDQAVQS MMAR_4535|M.marinum_M IEVELAKLMMQKAATLYDHGDDGGAAEAANMAKYAAAEASARSVDQAVQS MUL_4707|M.ulcerans_Agy99 IEVELAKLMMQKAATLYDHGDDGGAAEAANMAKYAAAEASARSVDQAVQS MAV_1088|M.avium_104 IEVELAKLMMQKAATLYDAGNDMGAAEAANMAKYAAAEAATRSVDQAVQS MSMEG_5494|M.smegmatis_MC2_155 IEIELAKLMMQKAAALYDAGDDLGAAEAANMAKYAAGEASVRAVDQAVQS Mvan_4850|M.vanbaalenii_PYR-1 IEVELAKLMMQKAASLYDAGDDAGAAEAANMAKYAAGEASVRAVDQAVQS MLBr_00737|M.leprae_Br4923 MKVEAARLIVYAAAARAERGEPD-LGFISAASKCFASDIAMEVTTDAVQL : :* ::*: :* : .: . : :* *.: . :*:* Mflv_4615|M.gilvum_PYR-GCK HGGNGLATEYGLATLWGPARLMRTAPISREMILNYVAQHSLNLPRSY MAB_2065c|M.abscessus_ATCC_199 HGGNGMATEYGLATLWGPARLMRTAPISREMILNFVAQHSLKLPASY TH_3057|M.thermoresistible__bu HGGNGLSYEYGLSELWFVTRLMRTAPVSREMVLNFVAQTSLGLPRSY Mb0997c|M.bovis_AF2122/97 MGGNGLTKEYGVAAMMTSARLARIAPISREMVLNFVAQTSLGLPRSY Rv0972c|M.tuberculosis_H37Rv MGGNGLTKEYGVAAMMTSARLARIAPISREMVLNFVAQTSLGLPRSY MMAR_4535|M.marinum_M MGGNGLTQEYGVAAMLTSSRLARIAPISREMVLNFVAQTSLGLPRSY MUL_4707|M.ulcerans_Agy99 MGGNGLTQEYGVAAMLTSSRLARIAPISREMVLNFVAQTSLGLPRSY MAV_1088|M.avium_104 MGGNGLTKEYGVAAMLASARLGRIAPVSREMVLNFVAQTSLGLPRSY MSMEG_5494|M.smegmatis_MC2_155 LGGNGLTKEYGIAAAVTASKLARIAPVSREMILNFVSQTSLGLPRSY Mvan_4850|M.vanbaalenii_PYR-1 LGGNGLTQEYGIASALTASRLARIAPVSREMILNFVAQTSLGLPRSY MLBr_00737|M.leprae_Br4923 FGGAGYTSDFPVERFMRDAKITQIYEGTNQIQRVVMSRALLR----- ** * : :: : ::: : :.:: ::: *