For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2467 | - | - | 100% (158) | conserved protein |
| M. thermoresistible (build 8) | TH_4601 | - | 3e-50 | 59.35% (155) | PUTATIVE putative hypothetical protein Mflv_2108 |
| M. thermoresistible (build 8) | TH_2500 | - | 2e-45 | 56.69% (157) | PUTATIVE putative conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1397c | - | 1e-25 | 41.06% (151) | hypothetical protein Mb1397c |
| M. gilvum PYR-GCK | Mflv_2108 | - | 3e-42 | 53.94% (165) | hypothetical protein Mflv_2108 |
| M. tuberculosis H37Rv | Rv1973 | - | 4e-44 | 54.19% (155) | MCE associated membrane protein |
| M. leprae Br4923 | MLBr_02598 | - | 4e-07 | 26.25% (160) | putative secreted protein |
| M. abscessus ATCC 19977 | MAB_4146c | - | 8e-11 | 26.06% (142) | MCE-family protein |
| M. marinum M | MMAR_4045 | - | 7e-46 | 58.49% (159) | hypothetical protein MMAR_4045 |
| M. avium 104 | MAV_1970 | - | 2e-45 | 58.06% (155) | hypothetical protein MAV_1970 |
| M. smegmatis MC2 155 | MSMEG_0353 | - | 3e-43 | 53.50% (157) | hypothetical protein MSMEG_0353 |
| M. ulcerans Agy99 | MUL_3911 | - | 5e-46 | 58.49% (159) | hypothetical protein MUL_3911 |
| M. vanbaalenii PYR-1 | Mvan_4597 | - | 5e-42 | 54.72% (159) | hypothetical protein Mvan_4597 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2108|M.gilvum_PYR-GCK MTDDVKG---------DEANKSVDDKNDENK----VEAAPEAEAVESTEA
Mvan_4597|M.vanbaalenii_PYR-1 MSNEKTGTADITEDTTAAADEPATDTEQPAKGTDDAESAADKTGAEETDT
Rv1973|M.tuberculosis_H37Rv --------------------------------------------------
MAV_1970|M.avium_104 MSR------------LTWPKRSKSAPEDVALDANEVTEVSTTEAPGTDEA
TH_2467|M.thermoresistible__bu --------------------------------------------------
MMAR_4045|M.marinum_M ---------------MAKGSAETSGDEVSGKPLPADEPGDEAQSNPAGAD
MUL_3911|M.ulcerans_Agy99 ---------------MAKGSAETSGDELSGKPLPADEPGDEAQSNPAGAD
MSMEG_0353|M.smegmatis_MC2_155 ---------------------MLAAQEVS---------------------
Mb1397c|M.bovis_AF2122/97 ---------------MTDDVRDVNTETTDATEVAEIDSAAGEAGDSATEA
MAB_4146c|M.abscessus_ATCC_199 --------------------------------------------------
MLBr_02598|M.leprae_Br4923 ----------------------MAAAEGGGS-------------------
Mflv_2108|M.gilvum_PYR-GCK VES-TEAVEPTGTDPEAT-----DADVTAAA-------------PTRRVE
Mvan_4597|M.vanbaalenii_PYR-1 VDEDAEVTEDADEDAEVTEDDDEDAEVTEDAGEDAEATDDAAVTPKRDGK
Rv1973|M.tuberculosis_H37Rv ------------------------------------------------MS
MAV_1970|M.avium_104 ETETDTAADSTGDTTDETSAEPTEGTVGEDE-----------PAAEWRVD
TH_2467|M.thermoresistible__bu --------------------------------------------------
MMAR_4045|M.marinum_M SDSDSDAEPDTEPDSESDGEPDADAPAETEDASQPEDSRPRRRRPHPKSS
MUL_3911|M.ulcerans_Agy99 SDSDSDAEPDTEPDSESDGEPDADAPAETEDASQPEDSRPRRRRPHPKSS
MSMEG_0353|M.smegmatis_MC2_155 -------------------EPEAAQPQS--------DSGPRRS-------
Mb1397c|M.bovis_AF2122/97 FDTDSATESTAQKGQR-----------------------------HRDLW
MAB_4146c|M.abscessus_ATCC_199 ------------------------------------------------MR
MLBr_02598|M.leprae_Br4923 -------------------------------------------WRNRRAG
Mflv_2108|M.gilvum_PYR-GCK WSRVVAFLVLPALALVLAAGAGYLKWLDDSYRDGSMSVDGNGRPSLAETS
Mvan_4597|M.vanbaalenii_PYR-1 WARLTAFVLLPALALVLALGAGYLKWQDTTFRSGAIEASPSGRLSLAEKT
Rv1973|M.tuberculosis_H37Rv WSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVAR---------AES
MAV_1970|M.avium_104 WSRVVAFGVLPAIALLLAAAAGFFKWQDNSVRNTDIAR---------IES
TH_2467|M.thermoresistible__bu -VAVCLYGVLPASILLLGLAAGVLKWLDGKYGTVETAR---------TAA
MMAR_4045|M.marinum_M WAAVLAWVVLPSLALLLAITAGVLRWQYDTMRYAQIAG---------VQA
MUL_3911|M.ulcerans_Agy99 WAAVLAWVVLPSLALLLAITAGVLRWQYDTMRYAQIAG---------VQA
MSMEG_0353|M.smegmatis_MC2_155 -VRVLAYVVIPLLIVGLAACAGYLQWRSSSMRAAQAAN---------VSA
Mb1397c|M.bovis_AF2122/97 RMQVTLKPVPVILILLMLISGGATGWLYLEQYRPDQQTDSG----AARAA
MAB_4146c|M.abscessus_ATCC_199 WLARIFVAVTVLVVVGLSAAAGGMYWHRVDTVASRAAG---------ETL
MLBr_02598|M.leprae_Br4923 QRTAIAVVVAAVLFVGSAAFAGAAVQPYLADRATVAVK---------LEV
: : .*
Mflv_2108|M.gilvum_PYR-GCK VQAARDSTIALLSYAPDTVEQQLGAARELLTGEFRDSYTSLTNDVVIPGA
Mvan_4597|M.vanbaalenii_PYR-1 VQIARDSTIALLSYKPDTVEQQLGAARDLLTGEFRDSYTSLTNDVVIPGA
Rv1973|M.tuberculosis_H37Rv VRAATDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGA
MAV_1970|M.avium_104 VQTAKDSTIAMLSYKPDTVEQQLRSARDLLTGEFRDSYTSLITDVVIPGA
TH_2467|M.thermoresistible__bu VQAATDSTVTMLSYEPETVEGDLASARDRLTGDFKESYISLTEEVVIPGA
MMAR_4045|M.marinum_M LQAAREGTVAMLSYKPETVEKDLTAAQDHLTGTFRDSYTQLTKDVVIPGA
MUL_3911|M.ulcerans_Agy99 LQAAREGTVAMLSYKPETVEKDLTAAQDHLTGTFRDSYTQLTKDVVIPGA
MSMEG_0353|M.smegmatis_MC2_155 VPAATDSTIKMLSYKPDTVQKDLELAAEGLTGPFRDDYNSLIHDVVIPGA
Mb1397c|M.bovis_AF2122/97 GAAASDGTIALLSYSPDTLDQDFATARSHLAGDFLSYYDQFTQQIVAPAA
MAB_4146c|M.abscessus_ATCC_199 IKQAGKQIGSIFGYDYQTVERSLDEQYAGLTPEYRREFEDKANREIIPQA
MLBr_02598|M.leprae_Br4923 ARTAANAITVLWTYTPENMDTLADRAATYVSGDFGAQYRKFVDAIVGP-N
* . : * :.:: :: : : . : *
Mflv_2108|M.gilvum_PYR-GCK KEKQIAAIATVPAAASVSVTADEAVVLLFVNQTVTV-GPDA-PTDTASSV
Mvan_4597|M.vanbaalenii_PYR-1 KEKQISAVASVPAAASVSATPTEAVVLLFVNQTVSV-GADV-PTDTASSV
Rv1973|M.tuberculosis_H37Rv QQKQISAVATVAAAASVSTSADRAVVLLFVNQTITV-GKDA-PTTAASSV
MAV_1970|M.avium_104 KQQQISAEASIPAAASVSADPREAVVLVFVNQTTII-GKSA-PTDTASTV
TH_2467|M.thermoresistible__bu KEQRISSAASVPAAAVVSATADKAVVLVYINQTTAV-GDDP-PTNLTSTA
MMAR_4045|M.marinum_M KQQRISAVARVPAAATVSADWGHAVVLVFVDQTTVI-GDDP-PTDMASTV
MUL_3911|M.ulcerans_Agy99 KQQRISAVARVPAAATVSADWGHAVVLVFVDQTTVI-GDDP-PTDMASTV
MSMEG_0353|M.smegmatis_MC2_155 QEKQISAVATVPAAAVVSATGNRAVVMVFVNQTTIV-GADP-PTSTASTV
Mb1397c|M.bovis_AF2122/97 KQKSLKTTAKVVRAAVSELHPDSAVVLVFVDQSTTS-KDSPNPSMAASSV
MAB_4146c|M.abscessus_ATCC_199 KQRKIVSQTSIVGTGIIAAHRDSAQVVVYMNRTITD-QSRT-PVYDSSSI
MLBr_02598|M.leprae_Br4923 KQAKITNSTEVTGVAVESLDASNAIAIVYTNTTSTSPLTKNIPALKYLSY
:: : : : .. * .::: : : * :
Mflv_2108|M.gilvum_PYR-GCK RVTLEKDGDRWLISKFDPV---------
Mvan_4597|M.vanbaalenii_PYR-1 RVTLEKVGDRWLISKFDPV---------
Rv1973|M.tuberculosis_H37Rv RVTLDNINGRWLISQFEPI---------
MAV_1970|M.avium_104 RVTLNKAGDRWLISKFEPV---------
TH_2467|M.thermoresistible__bu RVTLDKVEGQWLISEFEPV---------
MMAR_4045|M.marinum_M RVKLDKVGDRWLISEFQPI---------
MUL_3911|M.ulcerans_Agy99 RVKLDKVGDRWLISEFQPI---------
MSMEG_0353|M.smegmatis_MC2_155 RVTMDKVGERWLVSDFTPI---------
Mb1397c|M.bovis_AF2122/97 MVTLAKVDGNWLITKFTPV---------
MAB_4146c|M.abscessus_ATCC_199 QVDYTRAGDKWLISYITPL---------
MLBr_02598|M.leprae_Br4923 RLFMKRSAVRWLVTRMTTITSLDLTPQL
: . .**:: : .: