For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSRLTWPKRSKSAPEDVALDANEVTEVSTTEAPGTDEAETETDTAADSTGDTTDETSAEPTEGTVGEDEP AAEWRVDWSRVVAFGVLPAIALLLAAAAGFFKWQDNSVRNTDIARIESVQTAKDSTIAMLSYKPDTVEQQ LRSARDLLTGEFRDSYTSLITDVVIPGAKQQQISAEASIPAAASVSADPREAVVLVFVNQTTIIGKSAPT DTASTVRVTLNKAGDRWLISKFEPV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_1970 | - | - | 100% (235) | hypothetical protein MAV_1970 |
| M. avium 104 | MAV_2539 | - | 2e-56 | 55.67% (203) | hypothetical protein MAV_2539 |
| M. avium 104 | MAV_2071 | - | 4e-44 | 46.39% (194) | hypothetical protein MAV_2071 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1397c | - | 9e-25 | 34.39% (221) | hypothetical protein Mb1397c |
| M. gilvum PYR-GCK | Mflv_2108 | - | 2e-60 | 58.04% (224) | hypothetical protein Mflv_2108 |
| M. tuberculosis H37Rv | Rv1973 | - | 2e-50 | 60.00% (160) | MCE associated membrane protein |
| M. leprae Br4923 | MLBr_02598 | - | 3e-08 | 23.57% (157) | putative secreted protein |
| M. abscessus ATCC 19977 | MAB_4146c | - | 5e-13 | 27.85% (158) | MCE-family protein |
| M. marinum M | MMAR_4045 | - | 4e-55 | 50.00% (226) | hypothetical protein MMAR_4045 |
| M. smegmatis MC2 155 | MSMEG_0353 | - | 1e-46 | 57.69% (156) | hypothetical protein MSMEG_0353 |
| M. thermoresistible (build 8) | TH_2500 | - | 5e-52 | 49.53% (212) | PUTATIVE putative conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_3911 | - | 3e-55 | 50.00% (226) | hypothetical protein MUL_3911 |
| M. vanbaalenii PYR-1 | Mvan_4597 | - | 2e-61 | 53.73% (255) | hypothetical protein Mvan_4597 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2108|M.gilvum_PYR-GCK MTDDVKG---------DEANKSVDDKNDENK----VEAAPEAEAVESTEA
Mvan_4597|M.vanbaalenii_PYR-1 MSNEKTGTADITEDTTAAADEPATDTEQPAKGTDDAESAADKTGAEETDT
Rv1973|M.tuberculosis_H37Rv --------------------------------------------------
MAV_1970|M.avium_104 MSR------------LTWPKRSKSAPEDVALDANEVTEVSTTEAPGTDEA
MMAR_4045|M.marinum_M ---------------MAKGSAETSGDEVSGKPLPADEPGDEAQSNPAGAD
MUL_3911|M.ulcerans_Agy99 ---------------MAKGSAETSGDELSGKPLPADEPGDEAQSNPAGAD
MSMEG_0353|M.smegmatis_MC2_155 ---------------------MLAAQEVS---------------------
TH_2500|M.thermoresistible__bu ---------------MSDDDRKVTTDPDTPATADPSAAAGEAEPTEAAET
Mb1397c|M.bovis_AF2122/97 ---------------MTDDVRDVNTETTDATEVAEIDSAAGEAGDSATEA
MAB_4146c|M.abscessus_ATCC_199 --------------------------------------------------
MLBr_02598|M.leprae_Br4923 ----------------------MAAAEGGGS-------------------
Mflv_2108|M.gilvum_PYR-GCK VES-TEAVEPTGTDPEAT-----DADVTAAA-------------PTRRVE
Mvan_4597|M.vanbaalenii_PYR-1 VDEDAEVTEDADEDAEVTEDDDEDAEVTEDAGEDAEATDDAAVTPKRDGK
Rv1973|M.tuberculosis_H37Rv ------------------------------------------------MS
MAV_1970|M.avium_104 ETETDTAADSTGDTTDETSAEPTEGTVGEDE-----------PAAEWRVD
MMAR_4045|M.marinum_M SDSDSDAEPDTEPDSESDGEPDADAPAETEDASQPEDSRPRRRRPHPKSS
MUL_3911|M.ulcerans_Agy99 SDSDSDAEPDTEPDSESDGEPDADAPAETEDASQPEDSRPRRRRPHPKSS
MSMEG_0353|M.smegmatis_MC2_155 -------------------EPEAAQPQS--------DSGPRRS-------
TH_2500|M.thermoresistible__bu APPETAETAGTEHTEPAEPAEPAEPEAAAEAAD---------TPARRRIP
Mb1397c|M.bovis_AF2122/97 FDTDSATESTAQKGQRHR--------------------------DLWRMQ
MAB_4146c|M.abscessus_ATCC_199 ------------------------------------------------MR
MLBr_02598|M.leprae_Br4923 -------------------------------------------WRNRRAG
Mflv_2108|M.gilvum_PYR-GCK WSRVVAFLVLPALALVLAAGAGYLKWLDDSYRDGSMSVDGNGRPSLAETS
Mvan_4597|M.vanbaalenii_PYR-1 WARLTAFVLLPALALVLALGAGYLKWQDTTFRSGAIEASPSGRLSLAEKT
Rv1973|M.tuberculosis_H37Rv WSRVIAYGLLPGLALALTCGAGLLKWQDGAVRDAAVAR---------AES
MAV_1970|M.avium_104 WSRVVAFGVLPAIALLLAAAAGFFKWQDNSVRNTDIAR---------IES
MMAR_4045|M.marinum_M WAAVLAWVVLPSLALLLAITAGVLRWQYDTMRYAQIAG---------VQA
MUL_3911|M.ulcerans_Agy99 WAAVLAWVVLPSLALLLAITAGVLRWQYDTMRYAQIAG---------VQA
MSMEG_0353|M.smegmatis_MC2_155 -VRVLAYVVIPLLIVGLAACAGYLQWRSSSMRAAQAAN---------VSA
TH_2500|M.thermoresistible__bu WAKIAVFGVLPVLIVLLVVAAALLVWRQYTLQAVETAA---------VES
Mb1397c|M.bovis_AF2122/97 VTLKPVPVILILLMLISGGATGWLYLEQYRPDQQTDSG-------AARAA
MAB_4146c|M.abscessus_ATCC_199 WLARIFVAVTVLVVVGLSAAAGGMYWHRVDTVASRAAG---------ETL
MLBr_02598|M.leprae_Br4923 QRTAIAVVVAAVLFVGSAAFAGAAVQPYLADRATVAVK---------LEV
: : : :.
Mflv_2108|M.gilvum_PYR-GCK VQAARDSTIALLSYAPDTVEQQLGAARELLTGEFRDSYTSLTNDVVIPGA
Mvan_4597|M.vanbaalenii_PYR-1 VQIARDSTIALLSYKPDTVEQQLGAARDLLTGEFRDSYTSLTNDVVIPGA
Rv1973|M.tuberculosis_H37Rv VRAATDGTTALLSYRPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGA
MAV_1970|M.avium_104 VQTAKDSTIAMLSYKPDTVEQQLRSARDLLTGEFRDSYTSLITDVVIPGA
MMAR_4045|M.marinum_M LQAAREGTVAMLSYKPETVEKDLTAAQDHLTGTFRDSYTQLTKDVVIPGA
MUL_3911|M.ulcerans_Agy99 LQAAREGTVAMLSYKPETVEKDLTAAQDHLTGTFRDSYTQLTKDVVIPGA
MSMEG_0353|M.smegmatis_MC2_155 VPAATDSTIKMLSYKPDTVQKDLELAAEGLTGPFRDDYNSLIHDVVIPGA
TH_2500|M.thermoresistible__bu VEAAKDTTIAMLSYEPETVEEQLVAARERLTGDFKTSYTQLTDAVVIPGA
Mb1397c|M.bovis_AF2122/97 GAAASDGTIALLSYSPDTLDQDFATARSHLAGDFLSYYDQFTQQIVAPAA
MAB_4146c|M.abscessus_ATCC_199 IKQAGKQIGSIFGYDYQTVERSLDEQYAGLTPEYRREFEDKANREIIPQA
MLBr_02598|M.leprae_Br4923 ARTAANAITVLWTYTPENMDTLADRAATYVSGDFGAQYRKFVDAIVGP-N
* . : * :.:: :: : : . : *
Mflv_2108|M.gilvum_PYR-GCK KEKQIAAIATVPAAASVSVTADEAVVLLFVNQTVTVGP--DAPTDTASSV
Mvan_4597|M.vanbaalenii_PYR-1 KEKQISAVASVPAAASVSATPTEAVVLLFVNQTVSVGA--DVPTDTASSV
Rv1973|M.tuberculosis_H37Rv QQKQISAVATVAAAASVSTSADRAVVLLFVNQTITVGK--DAPTTAASSV
MAV_1970|M.avium_104 KQQQISAEASIPAAASVSADPREAVVLVFVNQTTIIGK--SAPTDTASTV
MMAR_4045|M.marinum_M KQQRISAVARVPAAATVSADWGHAVVLVFVDQTTVIGD--DPPTDMASTV
MUL_3911|M.ulcerans_Agy99 KQQRISAVARVPAAATVSADWGHAVVLVFVDQTTVIGD--DPPTDMASTV
MSMEG_0353|M.smegmatis_MC2_155 QEKQISAVATVPAAAVVSATGNRAVVMVFVNQTTIVGA--DPPTSTASTV
TH_2500|M.thermoresistible__bu KERQISATASVPSAASVSADPQKAVVLLFVDQTVIIGVGEEMPQNTKSSV
Mb1397c|M.bovis_AF2122/97 KQKSLKTTAKVVRAAVSELHPDSAVVLVFVDQSTTSKDS-PNPSMAASSV
MAB_4146c|M.abscessus_ATCC_199 KQRKIVSQTSIVGTGIIAAHRDSAQVVVYMNRTITDQS--RTPVYDSSSI
MLBr_02598|M.leprae_Br4923 KQAKITNSTEVTGVAVESLDASNAIAIVYTNTTSTSPLTKNIPALKYLSY
:: : : : .. * .::: : : * :
Mflv_2108|M.gilvum_PYR-GCK RVTLEKDGDRWLISKFDPV---------
Mvan_4597|M.vanbaalenii_PYR-1 RVTLEKVGDRWLISKFDPV---------
Rv1973|M.tuberculosis_H37Rv RVTLDNINGRWLISQFEPI---------
MAV_1970|M.avium_104 RVTLNKAGDRWLISKFEPV---------
MMAR_4045|M.marinum_M RVKLDKVGDRWLISEFQPI---------
MUL_3911|M.ulcerans_Agy99 RVKLDKVGDRWLISEFQPI---------
MSMEG_0353|M.smegmatis_MC2_155 RVTMDKVGERWLVSDFTPI---------
TH_2500|M.thermoresistible__bu RVTLEKIDGEWLVSEFEPV---------
Mb1397c|M.bovis_AF2122/97 MVTLAKVDGNWLITKFTPV---------
MAB_4146c|M.abscessus_ATCC_199 QVDYTRAGDKWLISYITPL---------
MLBr_02598|M.leprae_Br4923 RLFMKRSAVRWLVTRMTTITSLDLTPQL
: . .**:: : .: