For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2448 | - | - | 100% (237) | nitroreductase |
M. thermoresistible (build 8) | TH_4633 | - | 3e-27 | 34.21% (228) | PUTATIVE putative nitroreductase |
M. thermoresistible (build 8) | TH_2121 | - | 2e-26 | 35.65% (216) | POSSIBLE OXIDOREDUCTASE |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3403c | - | 5e-21 | 30.00% (220) | oxidoreductase |
M. gilvum PYR-GCK | Mflv_3382 | - | 2e-99 | 74.45% (227) | nitroreductase |
M. tuberculosis H37Rv | Rv3368c | - | 5e-21 | 30.00% (220) | oxidoreductase |
M. leprae Br4923 | MLBr_00418 | - | 3e-19 | 29.25% (212) | putative oxidoreductase |
M. abscessus ATCC 19977 | MAB_3693c | - | 9e-26 | 32.74% (223) | oxidoreductase |
M. marinum M | MMAR_2938 | - | 2e-71 | 62.50% (216) | nitroreductase |
M. avium 104 | MAV_1266 | - | 5e-24 | 30.69% (202) | nitroreductase family protein |
M. smegmatis MC2 155 | MSMEG_1635 | - | 9e-24 | 32.11% (218) | nitroreductase family protein |
M. ulcerans Agy99 | MUL_2198 | - | 1e-71 | 62.50% (216) | nitroreductase |
M. vanbaalenii PYR-1 | Mvan_3115 | - | 1e-104 | 75.86% (232) | nitroreductase |
CLUSTAL 2.0.9 multiple sequence alignment TH_2448|M.thermoresistible__bu MPDTPKPIPSVAEALARLDMPLAEAMMTQRAVRR--VLPDPVDDELVLKC Mvan_3115|M.vanbaalenii_PYR-1 ---MPEPIPSAAEALARLDMPLVEAMMTQRAIRR--VLPDPVDDEIVLKC Mflv_3382|M.gilvum_PYR-GCK ---MADPTPSTSEALARLDMSLIDVMMTQRAVRR--VYPDPVDDEIVMKC MMAR_2938|M.marinum_M -------------------MPLEDAMRTQRSIRR--LKSDPVDDSLVLHL MUL_2198|M.ulcerans_Agy99 -------------------MPLEDAMRTQRSIRR--LKSDPVDDSLVLHL Mb3403c|M.bovis_AF2122/97 ---------------MTLNLSVDEVLTTTRSVRKRLDFDKPVPRDVLMEC Rv3368c|M.tuberculosis_H37Rv ---------------MTLNLSVDEVLTTTRSVRKRLDFDKPVPRDVLMEC MLBr_00418|M.leprae_Br4923 -------------------MSVDEVLTTTRSVRKRLDFDKPVPRDVLMEC MSMEG_1635|M.smegmatis_MC2_155 ---------------MTLNLSVDELLTTTRSVRKRLDFEKPVSREVILEC MAB_3693c|M.abscessus_ATCC_199 --------------MTSLNLSADEVLTTTRSVRKRLDFDKPVERAVVEEC MAV_1266|M.avium_104 -------------------MNVEYLLTATPSARKSLDLDAPVEPGDIREC : : : : *: ** : . TH_2448|M.thermoresistible__bu IELALRAPTGSNGQNWEFIVVKDPAVKAKLADRYRQAWAVYGG---IGRR Mvan_3115|M.vanbaalenii_PYR-1 LELALRAPTGANGQNWEFVVVKDPKIKRKLQRRYRLAWRVFHR---TSIR Mflv_3382|M.gilvum_PYR-GCK LEVALHAPTGANGQNWEFIVVKDYETKKKLAKRYRQAWNLYYQ---TVIR MMAR_2938|M.marinum_M LELAMKAPTGSNAQNWEFIVVKDREVVAKLGRLNRRAMQLFGP---IYRR MUL_2198|M.ulcerans_Agy99 LELAMKAPTGSNAQNWEFIVVKDREVVAKLGRLNRRAMQLFGP---IYRR Mb3403c|M.bovis_AF2122/97 LELALQAPTGSNSQGWQWVFVEDAAKKKAIADVYLANARGYLSGPAPEYP Rv3368c|M.tuberculosis_H37Rv LELALQAPTGSNSQGWQWVFVEDAAKKKAIADVYLANARGYLSGPAPEYP MLBr_00418|M.leprae_Br4923 LQLALQAPTGSNSQGWHWVFVEDAEKRKAIGDIYLVNARCYLSQPAPEYP MSMEG_1635|M.smegmatis_MC2_155 LDLALQAPTGSNAQGWQWVFVEDEAKKKALADIYRSNAIPYLEQEAAER- MAB_3693c|M.abscessus_ATCC_199 LNIAMQAPTGSNHQGWHWVIVEDAEKKKAIADIYREGWNKYAKGAGATYA MAV_1266|M.avium_104 LRIGLQAANGSNAQSWRWLVVSDPALRARIAELYRD---AYLRRVGGRLL : :.::*..*:* *.*.::.*.* : : TH_2448|M.thermoresistible__bu -VTAG-DESMAKILRAVQWQVDHFTEIPVLVVACLRAGPREGRLPFMPAP Mvan_3115|M.vanbaalenii_PYR-1 DIASY-DEEMAKSVRAIEWQLEHFHEIPVLVIACLRLSAREGKVPYVPMP Mflv_3382|M.gilvum_PYR-GCK RVSKR-DPSMAKTARAVQWQVDHFTEVPVLIVACLKLGPKDGRIPFVPMP MMAR_2938|M.marinum_M SIARRGDEKMLRLQKAVQWQADHFEEIPVVVVACLRG-------VIAPWP MUL_2198|M.ulcerans_Agy99 SIARRGDEKMLRLQKAVQWQADHFEEIPVVVVACLRG-------VIAPWP Mb3403c|M.bovis_AF2122/97 DGDTRG-ERMGRVRDSATYLAEHMHRAPVLLIPCLK-------GREDESA Rv3368c|M.tuberculosis_H37Rv DGDTRG-ERMGRVRDSATYLAEHMHRAPVLLIPCLK-------GREDESA MLBr_00418|M.leprae_Br4923 EGDTRG-ERMRLVRDSATYLAEHMHEVPVLLIPCLL-------GRAEESP MSMEG_1635|M.smegmatis_MC2_155 -GDIRD-QQQPKVRDSARHLTDNFEKAPVLLIPCLE-------GRPDGAP MAB_3693c|M.abscessus_ATCC_199 EGDTRA-ERKAKVVDSAGYLAENFERSPLFLIPCIE-------GRLDNLP MAV_1266|M.avium_104 AGLMPAGTPESRIMSSTEWLVENLARVPMLVIPCYEPYL----PRIDGDE : ::: . *:.::.* TH_2448|M.thermoresistible__bu PVAASSFFGSIYPSVQNLLLAARAMGLGASLITLPLWS--MTSARRILKL Mvan_3115|M.vanbaalenii_PYR-1 HAAASAFFGSIYPSVQNLLLAARAMGLGASLITLPLWN--LTSARRVLKL Mflv_3382|M.gilvum_PYR-GCK HAALSGFYGSIYPSVQNLLLAARAMGLGASLITLPLWS--VTSTRKTLGL MMAR_2938|M.marinum_M RISTSSAYGSIYPAVQNLLLAARAAGLGAGLITVPLWS--TVLARRALGL MUL_2198|M.ulcerans_Agy99 RISTSSAYGSIYPAVQNLLLAARAAGLGAGLITVPLWS--TVLARRALGL Mb3403c|M.bovis_AF2122/97 VG-GVSFWASLFPAVWSFCLALRSRGLGSCWTTLHLLDNGEHKVADVLGI Rv3368c|M.tuberculosis_H37Rv VG-GVSFWASLFPAVWSFCLALRSRGLGSCWTTLHLLDNGEHKVADVLGI MLBr_00418|M.leprae_Br4923 LG-AVSYWASLFPAVWSFCLALRSRGLGTCWTSLHLLGDGEQRAAEVLGI MSMEG_1635|M.smegmatis_MC2_155 AGLSASFWGSLLPAVWSFMLALRSRGLGSAWTTLHLLGEGEKQAAEVVGI MAB_3693c|M.abscessus_ATCC_199 VVGAASSWGSLLPAVWSFMLAARNRGLGSAWTTLHLMDDGEKRTADIVGI MAV_1266|M.avium_104 SFHLATLYGSIFPPVWNFQLALHTRGYGTCITTLHLHH--EDEVAQLLGI :.*: *.* .: ** : * *: :: * . : : TH_2448|M.thermoresistible__bu P-LSVTPCCIVPLG-WPRGR-YGPTTRRPVREVVHLDSYGNRAWQSPS-- Mvan_3115|M.vanbaalenii_PYR-1 P-TEVTPCCVVPLG-WPRGR-YGPTTRRPVDEVVHLDRYGNRAWFGPRGA Mflv_3382|M.gilvum_PYR-GCK P-VSVTPCCVVPLG-WPRGR-YGPTTRRPVAEVMHLNTYGNRPWMGTG-- MMAR_2938|M.marinum_M P-WNVTPCAVVPLG-WPIGK-YGPTTRRPVAEIVSLDRYGNRAFR----- MUL_2198|M.ulcerans_Agy99 P-RNVTPCAVVPLG-WPIGK-YGPTTRRPVAEIVSLDRYGNRAFR----- Mb3403c|M.bovis_AF2122/97 PYDEYSQGGLLPIA-YTQGIDFRPAKRLPAESVTHWNGW----------- Rv3368c|M.tuberculosis_H37Rv PYDEYSQGGLLPIA-YTQGIDFRPAKRLPAESVTHWNGW----------- MLBr_00418|M.leprae_Br4923 PSDKYSQGGLFPIA-YTKGTDFRPANRLPAENVTHWDIW----------- MSMEG_1635|M.smegmatis_MC2_155 PFDKYSQAGLFPIA-YTIGTDFKKAKRLPAEQFAHWDTW----------- MAB_3693c|M.abscessus_ATCC_199 PFDKVTQGGLFPIA-YTVGTDFRLAKRQPLADVLHWDTW----------- MAV_1266|M.avium_104 P-PTYVQGCLLPVGRLRAGRTFRPARRRPIQEVIACDRWDGPPL------ * :.*:. * : : * * .. : : TH_2448|M.thermoresistible__bu --- Mvan_3115|M.vanbaalenii_PYR-1 DRP Mflv_3382|M.gilvum_PYR-GCK --- MMAR_2938|M.marinum_M --- MUL_2198|M.ulcerans_Agy99 --- Mb3403c|M.bovis_AF2122/97 --- Rv3368c|M.tuberculosis_H37Rv --- MLBr_00418|M.leprae_Br4923 --- MSMEG_1635|M.smegmatis_MC2_155 --- MAB_3693c|M.abscessus_ATCC_199 --- MAV_1266|M.avium_104 ---