For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2017 | - | - | 100% (116) | amidohydrolase 2 |
M. thermoresistible (build 8) | TH_2339 | - | 8e-25 | 56.18% (89) | amidohydrolase 2 |
M. thermoresistible (build 8) | TH_2277 | - | 7e-05 | 35.09% (57) | amidohydrolase family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2441 | - | 9e-52 | 76.52% (115) | amidohydrolase 2 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4742 | - | 1e-49 | 76.07% (117) | metal-dependent amidohydrolase |
M. avium 104 | MAV_0907 | - | 1e-51 | 77.78% (117) | amidohydrolase 2 |
M. smegmatis MC2 155 | MSMEG_4837 | - | 4e-53 | 81.74% (115) | amidohydrolase 2 |
M. ulcerans Agy99 | MUL_3143 | - | 3e-09 | 50.00% (54) | amidohydrolase |
M. vanbaalenii PYR-1 | Mvan_4211 | - | 9e-51 | 75.65% (115) | amidohydrolase 2 |
CLUSTAL 2.0.9 multiple sequence alignment TH_2017|M.thermoresistible__bu -------------------------------------------------- MSMEG_4837|M.smegmatis_MC2_155 ----------------MNKDDMILISVDDHIIEPPDMFKNHLPAKYRDEA MMAR_4742|M.marinum_M ----------------MNKEDMILISVDDHTVEPPNMFKNHLSAKYLDDA MAV_0907|M.avium_104 ----------------MNKEDMILISVDDHTVEPPDMFKNHLPKKYLDDA Mflv_2441|M.gilvum_PYR-GCK ----------------MDKNDMILISVDDHIVEPPDMFKNHLSKKYLDEA Mvan_4211|M.vanbaalenii_PYR-1 MSRAPARKGGNGRSAVMNRDDMILISVDDHIVEPPDMFKNHLPRKYLDEA MUL_3143|M.ulcerans_Agy99 -----------MTDPPRARRRYTVISVDDHIVEPPDTFTGRLPQRFADRA TH_2017|M.thermoresistible__bu -------------------------------------------------- MSMEG_4837|M.smegmatis_MC2_155 PRLVHNPDGSDTWQFRDTVIPNVALNAVAGRPKEEYGLEPQGLDEIRKGC MMAR_4742|M.marinum_M PRLVHNPDGSDMWKFRDTVIPNVALNAVAGRPKEEYGLEPQGLDEIRPGC MAV_0907|M.avium_104 PRLVHNPDGSDMWKFRDTVIPNVALNAVAGRPKEEYGIEPTGLDEIRPGC Mflv_2441|M.gilvum_PYR-GCK PRLVHNEDGSDTWQFRDVVIPNVALNAVAGRPKEEYGLEPQGLDEIRPGC Mvan_4211|M.vanbaalenii_PYR-1 PRLVHNPDGSDTWQFRDVVIPNVALNAVAGRPKEEYGLEPQGLDEIRPGC MUL_3143|M.ulcerans_Agy99 PRVVETDDGGQVWVYDGQVLPNVGFNAVVGRPVSEYGFEPVRFDEMRRGA TH_2017|M.thermoresistible__bu -------------------------------------------------- MSMEG_4837|M.smegmatis_MC2_155 YDPNERVKDMNAGGVLATMNFPSFP-GFAAR--LFATDDEEFSLALVQAY MMAR_4742|M.marinum_M YNVDERIKDMNAGGILASICFPSFP-GFAGR--LFATEDPDFSVALVQAY MAV_0907|M.avium_104 YNVDERVKDMNAGGILASICFPSFP-GFAGR--LFATEDNDFSIALVQAY Mflv_2441|M.gilvum_PYR-GCK WQVDERVKDMNAGGILGSMCFPSFP-GFAGR--LFATEDPEFSLALVQAY Mvan_4211|M.vanbaalenii_PYR-1 WQVDERVKDMNAGGILGSMCFPSFP-GFAGR--LFATEDAEFSLALVQAY MUL_3143|M.ulcerans_Agy99 WDIHERIKDMDLNGVYASLNFPSFLPGFAGQRLQQVTKDPELAWAAVRAW TH_2017|M.thermoresistible__bu -------------------------------------------------- MSMEG_4837|M.smegmatis_MC2_155 NDWHIDEWCASNPGRFIPMAIPAIWNPGLAAAEVRRVAEKGVHSLTFTEN MMAR_4742|M.marinum_M NDWHIDEWCGAYPARFVPMAIPVIWDAEACAAEVRRVAKKGVHALTFTEN MAV_0907|M.avium_104 NDWHIDEWCGAYPARFIPMAIPVIWDAEECAKEVRRVSKKGVHALTFTEN Mflv_2441|M.gilvum_PYR-GCK NDWHVEEWCGAYPARFIPMTLPVIWDPEACAKEIRRNAARGVHSLTFSEN Mvan_4211|M.vanbaalenii_PYR-1 NDWHVEEWCGAYPARFIPMTLPVIWDPEACAKEIRRNAARGVHSLTFSEN MUL_3143|M.ulcerans_Agy99 NDWHLEAWAGPYPERIIPCQLPWLLDPSAGAQLIHENAERGFRAVSFSEN TH_2017|M.thermoresistible__bu -------------------------------------------------- MSMEG_4837|M.smegmatis_MC2_155 PSTLGYPSFHDLEYWRPLWQALVDTETVMNVHIGSSGKLAITAPDAPMDV MMAR_4742|M.marinum_M PAAMGYPSFHN-EYWNPLWKALCDTNTVMNIHIGSSGRLAITAPDAPMDV MAV_0907|M.avium_104 PAAMGYPSFHD-EYWNPLWKALVDTNTVMNVHIGSSGRLAITAPDAPMDV Mflv_2441|M.gilvum_PYR-GCK PSAMGYPSFHDFDHWKPMWDALVDTDTVLNVHIGSSGRLAITAPDAPMDV Mvan_4211|M.vanbaalenii_PYR-1 PSAMGYPSFHDFEHWKPMWDALVDTDTVLNVHIGSSGRLAITAPDAPMDV MUL_3143|M.ulcerans_Agy99 PAMLGLPSIHS-GHWDPMMAACAETGTVVNLHIGSSGSSPSTTDDAPADV TH_2017|M.thermoresistible__bu -------------------------------------------------- MSMEG_4837|M.smegmatis_MC2_155 MITLQPMNIVQAAADLLWSAPIKEFPTLKIALSEGGTGWIPYFLDRVDRT MMAR_4742|M.marinum_M MITLQPMNIVQAAADLLWSRPIKEYPDLKIALSEGGTGWIPYFLERADRT MAV_0907|M.avium_104 MITLQPMNIVQAAADLLWSRPIKEFPDLKIALSEGGTGWIPYFLERADRT Mflv_2441|M.gilvum_PYR-GCK MITLQPMNIVQAAADLLWSRPIKEYPDLKIALSEGGTGWIPYFLERVDRT Mvan_4211|M.vanbaalenii_PYR-1 MITLQPMNIVQAAADLLWSRPIKEYPDLKIALSEGGTGWIPYFLERVDRT MUL_3143|M.ulcerans_Agy99 PGVLFFAYAISAAVDWLYSGLPSRFPDLKICLSEGRIGWVAGLLDRLDHM TH_2017|M.thermoresistible__bu -------------------------------------VQLRHRIGIDNIC MSMEG_4837|M.smegmatis_MC2_155 FEMHSTW-THQNFGGKLP-SEVFREHFMTCFISDPVGVKNRHMIGIDNIC MMAR_4742|M.marinum_M FEMHSTW-THQNFGGKIP-SEVFREHFLTCFISDKVGVALRNMIGIDNIA MAV_0907|M.avium_104 FEMHSAW-THQDFKGKLP-SEVFREHFLTCFISDKVGVALRNEIGIDNIC Mflv_2441|M.gilvum_PYR-GCK YEMHSTW-TGQDFKGKLP-SEVFREHFLTCFIADPVGVATRHQIGVDNIC Mvan_4211|M.vanbaalenii_PYR-1 YEMHSTW-TGQDFKGKLP-SEVFREHFLTCFIADPVGVATRHQIGVDNIC MUL_3143|M.ulcerans_Agy99 LSYHEMYGTWRAMGESLTSAEVFTRNFWFCAVEDKSSFVQHYRIGTENIM . : ** :** TH_2017|M.thermoresistible__bu WEADYPHSDSMWPGAPEELWEVLTANNVPDDEINKITHENAMRWYSFDPF MSMEG_4837|M.smegmatis_MC2_155 WEMDYPHSDSMWPGAPEELSAVFDTYDVPDDEINKITHENAMRLYHFDPF MMAR_4742|M.marinum_M WEADYPHSDSMWPGAPEELWDVLSVNDVPDGEINKMTYENAMRWYSFDPF MAV_0907|M.avium_104 WEADYPHSDSMWPGAPEELWDVLSINNVPDDEINKMTYQNAMRWYSFDPF Mflv_2441|M.gilvum_PYR-GCK WEADYPHSDSMWPGAPEQLDEVLKANNVPDDEINKMTYENAMRWYHWDPF Mvan_4211|M.vanbaalenii_PYR-1 WEADYPHSDSMWPGAPEQLDEVLKVNSVPDDEIDKMTYQNAMRWYHWDPF MUL_3143|M.ulcerans_Agy99 VESDYPHCDSTWPHTQQTMHEQLDG--LPADVIRKITWENAARLYQHPVP * ****.** ** : : : : :* . * *:* :** * * TH_2017|M.thermoresistible__bu THIPRDKATVGALRKAAEGHDVSIRALSK-KD-KTGASFADFQANAKAVT MSMEG_4837|M.smegmatis_MC2_155 AHVPKEQATVGALRKAAEGHDVSIRALSK-KD-KTGASFADFQANAKAVS MMAR_4742|M.marinum_M SHITREQATVGALRKAAEGHDVSVRALSHHKDARSGSSVAEFTANAKALT MAV_0907|M.avium_104 THISREQATVGALRKAAEGHDVSIKAQGHDKDSRGGSSFAEFAANAKALT Mflv_2441|M.gilvum_PYR-GCK THIAKEQATVGALRKAAEGHDVSIQALSN-KE-KTGTTFSDFAASAKSIS Mvan_4211|M.vanbaalenii_PYR-1 THIPKEQATVGALRKAAEGHDVSIQALSH-KE-KTGATFADFAARAKEIT MUL_3143|M.ulcerans_Agy99 VAIAQNPEAF---------------------------------------- :.:: :. TH_2017|M.thermoresistible__bu GVKD MSMEG_4837|M.smegmatis_MC2_155 GARD MMAR_4742|M.marinum_M GNKD MAV_0907|M.avium_104 GNKD Mflv_2441|M.gilvum_PYR-GCK GNKD Mvan_4211|M.vanbaalenii_PYR-1 GNTD MUL_3143|M.ulcerans_Agy99 ----