For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SRAPARKGGNGRSAVMNRDDMILISVDDHIVEPPDMFKNHLPRKYLDEAPRLVHNPDGSDTWQFRDVVIP NVALNAVAGRPKEEYGLEPQGLDEIRPGCWQVDERVKDMNAGGILGSMCFPSFPGFAGRLFATEDAEFSL ALVQAYNDWHVEEWCGAYPARFIPMTLPVIWDPEACAKEIRRNAARGVHSLTFSENPSAMGYPSFHDFEH WKPMWDALVDTDTVLNVHIGSSGRLAITAPDAPMDVMITLQPMNIVQAAADLLWSRPIKEYPDLKIALSE GGTGWIPYFLERVDRTYEMHSTWTGQDFKGKLPSEVFREHFLTCFIADPVGVATRHQIGVDNICWEADYP HSDSMWPGAPEQLDEVLKVNSVPDDEIDKMTYQNAMRWYHWDPFTHIPKEQATVGALRKAAEGHDVSIQA LSHKEKTGATFADFAARAKEITGNTD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4211 | - | - | 100% (447) | amidohydrolase 2 |
M. vanbaalenii PYR-1 | Mvan_2022 | - | 0.0 | 98.30% (411) | amidohydrolase 2 |
M. vanbaalenii PYR-1 | Mvan_4275 | - | e-115 | 47.77% (404) | amidohydrolase 2 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2441 | - | 0.0 | 95.36% (431) | amidohydrolase 2 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4742 | - | 0.0 | 80.37% (433) | metal-dependent amidohydrolase |
M. avium 104 | MAV_0907 | - | 0.0 | 82.45% (433) | amidohydrolase 2 |
M. smegmatis MC2 155 | MSMEG_4837 | - | 0.0 | 79.58% (431) | amidohydrolase 2 |
M. thermoresistible (build 8) | TH_2339 | - | 1e-116 | 47.76% (402) | amidohydrolase 2 |
M. ulcerans Agy99 | MUL_3143 | - | 9e-92 | 45.84% (373) | amidohydrolase |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_4211|M.vanbaalenii_PYR-1 MSRAPARKGGNGRSAVMNRDDMILISVDDHIVEPPDMFKNHLPRKYLDEA Mflv_2441|M.gilvum_PYR-GCK ----------------MDKNDMILISVDDHIVEPPDMFKNHLSKKYLDEA MMAR_4742|M.marinum_M ----------------MNKEDMILISVDDHTVEPPNMFKNHLSAKYLDDA MAV_0907|M.avium_104 ----------------MNKEDMILISVDDHTVEPPDMFKNHLPKKYLDDA MSMEG_4837|M.smegmatis_MC2_155 ----------------MNKDDMILISVDDHIIEPPDMFKNHLPAKYRDEA TH_2339|M.thermoresistible__bu ------------MSHDLRPEDLILVSIDDHVVEPPDMFLRHVPAKYRDEA MUL_3143|M.ulcerans_Agy99 -----------MTDPPRARRRYTVISVDDHIVEPPDTFTGRLPQRFADRA ::*:*** :***: * ::. :: * * Mvan_4211|M.vanbaalenii_PYR-1 PRLVHNPDGSDTWQFRDVVIPNVALNAVAGRPKEEYGLEPQGLDEIRPGC Mflv_2441|M.gilvum_PYR-GCK PRLVHNEDGSDTWQFRDVVIPNVALNAVAGRPKEEYGLEPQGLDEIRPGC MMAR_4742|M.marinum_M PRLVHNPDGSDMWKFRDTVIPNVALNAVAGRPKEEYGLEPQGLDEIRPGC MAV_0907|M.avium_104 PRLVHNPDGSDMWKFRDTVIPNVALNAVAGRPKEEYGIEPTGLDEIRPGC MSMEG_4837|M.smegmatis_MC2_155 PRLVHNPDGSDTWQFRDTVIPNVALNAVAGRPKEEYGLEPQGLDEIRKGC TH_2339|M.thermoresistible__bu PIVVTDENGVDQWMYQGRPQGVSGLNAVVSWPPEEWGRNPARFAEMRPGV MUL_3143|M.ulcerans_Agy99 PRVVETDDGGQVWVYDGQVLPNVGFNAVVGRPVSEYGFEPVRFDEMRRGA * :* :* : * : . .:***.. * .*:* :* : *:* * Mvan_4211|M.vanbaalenii_PYR-1 WQVDERVKDMNAGGILGSMCFPSFP-GFAGR--LFATEDAEFSLALVQAY Mflv_2441|M.gilvum_PYR-GCK WQVDERVKDMNAGGILGSMCFPSFP-GFAGR--LFATEDPEFSLALVQAY MMAR_4742|M.marinum_M YNVDERIKDMNAGGILASICFPSFP-GFAGR--LFATEDPDFSVALVQAY MAV_0907|M.avium_104 YNVDERVKDMNAGGILASICFPSFP-GFAGR--LFATEDNDFSIALVQAY MSMEG_4837|M.smegmatis_MC2_155 YDPNERVKDMNAGGVLATMNFPSFP-GFAAR--LFATDDEEFSLALVQAY TH_2339|M.thermoresistible__bu YDVHERVRDMNRNGILASMCFPTFT-GFSAR--HLNMHREHVTLIMVSAY MUL_3143|M.ulcerans_Agy99 WDIHERIKDMDLNGVYASLNFPSFLPGFAGQRLQQVTKDPELAWAAVRAW :: .**::**: .*: .:: **:* **:.: . ..: * *: Mvan_4211|M.vanbaalenii_PYR-1 NDWHVEEWCGAYPARFIPMTLPVIWDPEACAKEIRRNAARGVHSLTFSEN Mflv_2441|M.gilvum_PYR-GCK NDWHVEEWCGAYPARFIPMTLPVIWDPEACAKEIRRNAARGVHSLTFSEN MMAR_4742|M.marinum_M NDWHIDEWCGAYPARFVPMAIPVIWDAEACAAEVRRVAKKGVHALTFTEN MAV_0907|M.avium_104 NDWHIDEWCGAYPARFIPMAIPVIWDAEECAKEVRRVSKKGVHALTFTEN MSMEG_4837|M.smegmatis_MC2_155 NDWHIDEWCASNPGRFIPMAIPAIWNPGLAAAEVRRVAEKGVHSLTFTEN TH_2339|M.thermoresistible__bu NDWHIDEWAGSYPGRFIPIAILPTWNPEAMCAEIRRVAAKGCRAVTMPEL MUL_3143|M.ulcerans_Agy99 NDWHLEAWAGPYPERIIPCQLPWLLDPSAGAQLIHENAERGFRAVSFSEN ****:: *... * *::* : :. . ::. : :* :::::.* Mvan_4211|M.vanbaalenii_PYR-1 PSAMGYPSFHDFEHWKPMWDALVDTDTVLNVHIGSSGRLAITAPDAPMDV Mflv_2441|M.gilvum_PYR-GCK PSAMGYPSFHDFDHWKPMWDALVDTDTVLNVHIGSSGRLAITAPDAPMDV MMAR_4742|M.marinum_M PAAMGYPSFHN-EYWNPLWKALCDTNTVMNIHIGSSGRLAITAPDAPMDV MAV_0907|M.avium_104 PAAMGYPSFHD-EYWNPLWKALVDTNTVMNVHIGSSGRLAITAPDAPMDV MSMEG_4837|M.smegmatis_MC2_155 PSTLGYPSFHDLEYWRPLWQALVDTETVMNVHIGSSGKLAITAPDAPMDV TH_2339|M.thermoresistible__bu PHLEGLPSYHDEDYWGPVFRTLSEENVVMCLHIGTGFGAISMAPDAPIDN MUL_3143|M.ulcerans_Agy99 PAMLGLPSIHS-GHWDPMMAACAETGTVVNLHIGSSGSSPSTTDDAPADV * * ** *. :* *: : : .*: :***:. : *** * Mvan_4211|M.vanbaalenii_PYR-1 MITLQPMNIVQAAADLLWSRPIKEYPDLKIALSEGGTGWIPYFLERVDRT Mflv_2441|M.gilvum_PYR-GCK MITLQPMNIVQAAADLLWSRPIKEYPDLKIALSEGGTGWIPYFLERVDRT MMAR_4742|M.marinum_M MITLQPMNIVQAAADLLWSRPIKEYPDLKIALSEGGTGWIPYFLERADRT MAV_0907|M.avium_104 MITLQPMNIVQAAADLLWSRPIKEFPDLKIALSEGGTGWIPYFLERADRT MSMEG_4837|M.smegmatis_MC2_155 MITLQPMNIVQAAADLLWSAPIKEFPTLKIALSEGGTGWIPYFLDRVDRT TH_2339|M.thermoresistible__bu MIILATQVSAMCAQDLLWGPAMRNYPDLKFAFSEGGIGWIPFYLDRCDRH MUL_3143|M.ulcerans_Agy99 PGVLFFAYAISAAVDWLYSGLPSRFPDLKICLSEGRIGWVAGLLDRLDHM * .* * *:. .:* **:.:*** **:. *:* *: Mvan_4211|M.vanbaalenii_PYR-1 YEMHSTWTG-QDFKGKLP-SEVFREHFLTCFIADPVGVATRHQIGVDNIC Mflv_2441|M.gilvum_PYR-GCK YEMHSTWTG-QDFKGKLP-SEVFREHFLTCFIADPVGVATRHQIGVDNIC MMAR_4742|M.marinum_M FEMHSTWTH-QNFGGKIP-SEVFREHFLTCFISDKVGVALRNMIGIDNIA MAV_0907|M.avium_104 FEMHSAWTH-QDFKGKLP-SEVFREHFLTCFISDKVGVALRNEIGIDNIC MSMEG_4837|M.smegmatis_MC2_155 FEMHSTWTH-QNFGGKLP-SEVFREHFMTCFISDPVGVKNRHMIGIDNIC TH_2339|M.thermoresistible__bu YTN-QKWLR-RDFGDKLP-SDVFREHSLACYVTDKTSLKLRHEIGIDIIA MUL_3143|M.ulcerans_Agy99 LSYHEMYGTWRAMGESLTSAEVFTRNFWFCAVEDKSSFVQHYRIGTENIM . : : : .:. ::** .: * : * .. : ** : * Mvan_4211|M.vanbaalenii_PYR-1 WEADYPHSDSMWPGAPEQLDEVLKVNSVPDDEIDKMTYQNAMRWYHWDPF Mflv_2441|M.gilvum_PYR-GCK WEADYPHSDSMWPGAPEQLDEVLKANNVPDDEINKMTYENAMRWYHWDPF MMAR_4742|M.marinum_M WEADYPHSDSMWPGAPEELWDVLSVNDVPDGEINKMTYENAMRWYSFDPF MAV_0907|M.avium_104 WEADYPHSDSMWPGAPEELWDVLSINNVPDDEINKMTYQNAMRWYSFDPF MSMEG_4837|M.smegmatis_MC2_155 WEMDYPHSDSMWPGAPEELSAVFDTYDVPDDEINKITHENAMRLYHFDPF TH_2339|M.thermoresistible__bu WECDYPHSDCFWPDAPEQVHAELRAAGADDFDINKITWENSCRFFSWDPF MUL_3143|M.ulcerans_Agy99 VESDYPHCDSTWPHTQQTMHEQLDG--LPADVIRKITWENAARLYQHPVP * ****.*. ** : : : : * *:* :*: * : Mvan_4211|M.vanbaalenii_PYR-1 THIPKEQATVGALRKAAEGHDVSIQALSHKE--KTGATFADFAARAKEIT Mflv_2441|M.gilvum_PYR-GCK THIAKEQATVGALRKAAEGHDVSIQALSNKE--KTGTTFSDFAASAKSIS MMAR_4742|M.marinum_M SHITREQATVGALRKAAEGHDVSVRALSHHKDARSGSSVAEFTANAKALT MAV_0907|M.avium_104 THISREQATVGALRKAAEGHDVSIKAQGHDKDSRGGSSFAEFAANAKALT MSMEG_4837|M.smegmatis_MC2_155 AHVPKEQATVGALRKAAEGHDVSIRALSKKD--KTGASFADFQANAKAVS TH_2339|M.thermoresistible__bu EHTPRAEATVGALRAKATDVDTTIRSR---------AEWAQLYEQKQQFA MUL_3143|M.ulcerans_Agy99 VAIAQNPEAF---------------------------------------- .: :. Mvan_4211|M.vanbaalenii_PYR-1 GNTD Mflv_2441|M.gilvum_PYR-GCK GNKD MMAR_4742|M.marinum_M GNKD MAV_0907|M.avium_104 GNKD MSMEG_4837|M.smegmatis_MC2_155 GARD TH_2339|M.thermoresistible__bu QA-- MUL_3143|M.ulcerans_Agy99 ----