For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2000 | - | 100% (390) | PROBABLE TRANSPOSASE | |
| M. thermoresistible (build 8) | TH_2560 | - | 4e-70 | 45.57% (316) | PUTATIVE transposase, mutator type |
| M. thermoresistible (build 8) | TH_1996 | - | 5e-34 | 27.30% (370) | IS6120, transposase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3461c | - | 1e-144 | 91.01% (278) | transposase |
| M. gilvum PYR-GCK | Mflv_3191 | - | 0.0 | 95.36% (388) | transposase, mutator type |
| M. tuberculosis H37Rv | Rv3431c | - | 1e-144 | 91.01% (278) | hypothetical protein Rv3431c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_5116 | - | 1e-124 | 58.82% (374) | transposase, Mutator family protein |
| M. smegmatis MC2 155 | MSMEG_4154 | - | 1e-166 | 91.77% (316) | transposase, Mutator family protein |
| M. ulcerans Agy99 | MUL_4584 | - | 1e-32 | 29.17% (336) | transposase for IS2606 |
| M. vanbaalenii PYR-1 | Mvan_0585 | - | 1e-126 | 61.90% (357) | transposase, mutator type |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_5116|M.avium_104 MVKRPRITTERNIAMALDQSALLEVLDALRT-------------------
Mvan_0585|M.vanbaalenii_PYR-1 --------------MALDQSALLEVLDALRT-------------------
TH_2000|M.thermoresistible__bu --------------------------------------------------
Mflv_3191|M.gilvum_PYR-GCK --------------MTQDHSALLAQLDALRS-------------------
Mb3461c|M.bovis_AF2122/97 --------------------------------------------------
Rv3431c|M.tuberculosis_H37Rv --------------------------------------------------
MSMEG_4154|M.smegmatis_MC2_155 --------------MTQDHSALLAQLDALKS-------------------
MUL_4584|M.ulcerans_Agy99 -MMTKTVVAVQPSQNHEDEAGAVAAIDVPSSRDVDELEVARELVRQAREA
MAV_5116|M.avium_104 ----ADAGERITQAAETIYQALIDAELTAFIGASPHERT-ETRSNQRNGS
Mvan_0585|M.vanbaalenii_PYR-1 ----ADAGERITQACEIVYQALIDAELTAKIGAALHERT-ETRSNQRNGS
TH_2000|M.thermoresistible__bu ---------VFAELIRAGLQQLIEAEATAAIGAGRYERT-DGRTVHRNGH
Mflv_3191|M.gilvum_PYR-GCK ----ADAGAVFAELIRAGLQQLIEAEATAAIGAGRYQRT-DGRMVHRNGH
Mb3461c|M.bovis_AF2122/97 ---------MFAELIRAGLQALIEAEATEAIGAGRYERS-DGRIVHRNGH
Rv3431c|M.tuberculosis_H37Rv ---------MFAELIRAGLQALIEAEATEAIGAGRYERS-DGRIVHRNGH
MSMEG_4154|M.smegmatis_MC2_155 ----ADAGAVFAELIRAGLQALIEAEATEVIGAGRYQRT-DGRATHRNGH
MUL_4584|M.ulcerans_Agy99 GVGLTGPGGLLKAMTKTVIETALDEELSEHLGYDRHDRAGYGNGNSRNGT
: . : :: * : :* ::*: . ***
MAV_5116|M.avium_104 RPRTLSTVAG-DLELRIPKLRTGSFFPALLERRRRVDQCLFAVVMEAYLH
Mvan_0585|M.vanbaalenii_PYR-1 RPRTLSTVAG-DLELRIPKLRSGSFFPALLERRRRVDQCLFAVVMEAYLH
TH_2000|M.thermoresistible__bu RPKTVSTTSG-DIEVQIPKLRAGSFFPSLLERRRRIDRALHAVIMEAYVH
Mflv_3191|M.gilvum_PYR-GCK RPKTVSTTSG-DIEVQIPKLRAGSFFPSLLERRRRIDKALHAVIMEAYVH
Mb3461c|M.bovis_AF2122/97 RPKTVSTTAG-DIEVQIPKLRAGSFFPSLLERRRRIDKALHAVIMEAYVH
Rv3431c|M.tuberculosis_H37Rv RPKTVSTTAG-DIEVQIPKLRAGSFFPSLLERRRRIDKALHAVIMEAYVH
MSMEG_4154|M.smegmatis_MC2_155 RPKTVSTTAG-DVEVQIPKLRAGSFFPSLLERRRRIDRALHAVIMEAYVH
MUL_4584|M.ulcerans_Agy99 RSKTVLTDACGSIEIDVPRDRAGTFEPKIVEKRQRRLTDVDEVVLSLYAR
*.:*: * : .:*: :*: *:*:* * ::*:*:* : *::. * :
MAV_5116|M.avium_104 GTSTRKVDDLVKALGTDTGISKSEVSRICKDLDTEVAAFRDRPLGDQRFP
Mvan_0585|M.vanbaalenii_PYR-1 GTSTRKVDDLVKALGADSGISKSEVSRICKDLDTEVGAFRDRPLGEQRFP
TH_2000|M.thermoresistible__bu GVSTRSVDDLVTAMGVGSGVSKSEVSRICAGLDEEIEAFRIRSLAHTQFP
Mflv_3191|M.gilvum_PYR-GCK GVSTRSVDDLVAAMGVESGVSKSEVSRICAGLDIEIEAFRTRSLAHTEFP
Mb3461c|M.bovis_AF2122/97 GVSTRSVDDLVAAMGVQAGVSKSEVSRICAGLDTEIEAFRTRSLTHTEFP
Rv3431c|M.tuberculosis_H37Rv GVSTRSVDDLVAAMGVQAGVSKSEVSRICAGLDTEIEAFRTRSLTHTEFP
MSMEG_4154|M.smegmatis_MC2_155 GVSTRSVDDLVAALGVGSGVSKSEVSRICAGLDKEIDAFRTRSLNHTSFP
MUL_4584|M.ulcerans_Agy99 GLTTGEISAHFAHI-YDAAVSKDTVSRITDRVLEEMTAWHTRPLER-VYA
* :* .:. . : :.:**. **** : *: *:: *.* :.
MAV_5116|M.avium_104 YVFLDATYCKARVNHRVVSQAVVIATGVAADGRREVLGFEVG--DSEDGA
Mvan_0585|M.vanbaalenii_PYR-1 YVFLDATYCKARVNHRVVSQAVVIATGVAADGRREVLGFEVG--DSEDGA
TH_2000|M.thermoresistible__bu YVFCDATFCKVRIGAHVVSQALVVATGVSIDGTREVLGTAVG--DSESFE
Mflv_3191|M.gilvum_PYR-GCK YIFCDATFCKVRVGAHVVSQALVVATGVSIDGTREVLGTAVG--DSESFE
Mb3461c|M.bovis_AF2122/97 YVFCDATFCKVRVGAHVVSQALVVATGVSIDGTREVLGTAVG--DSESYE
Rv3431c|M.tuberculosis_H37Rv YVFCDATFCKVRVGAHVVSQALVVATGVSIDGTREVLGTAVG--DSESYE
MSMEG_4154|M.smegmatis_MC2_155 YVFCDATFCKVRIGAHVVSQALVVATGVSIDGTREVLGTAVG--DSESFE
MUL_4584|M.ulcerans_Agy99 AVFIDALHVKIRD-GQVGPRPVYAAVGVDLAGHRDVLGMWAGEGDGESAK
:* ** . * * :* .:.: *.** * *:*** .* *.*.
MAV_5116|M.avium_104 FWTAFLRSLKSRGLAGVQLVISDAHAGLRSAIDAVLIGAAWQRCRVHFLR
Mvan_0585|M.vanbaalenii_PYR-1 FWTAFLRSLKSRGLAGVQLVISDAHAGLRAAIDAVLIGSAWQRCRVHFLR
TH_2000|M.thermoresistible__bu FWREFLASLKARGLSGVHLVVSDAHAGLKAAVAQQFTNSSWQRCRVHFMR
Mflv_3191|M.gilvum_PYR-GCK FWREFLASLKARGLTGVHLVISDAHVGLKTAVAQQFTNSSWQRCRVHFMR
Mb3461c|M.bovis_AF2122/97 FWREFLASLKARGLTGVHLVISDAHAGLKAAVAQQFSGASWQRCRVHFMR
Rv3431c|M.tuberculosis_H37Rv FWREFLASLKARGLTGVHLVISDAHAGLKAAVAQQFSGASWQRCRVHFMR
MSMEG_4154|M.smegmatis_MC2_155 FWREFLASLKARGLSGVHLVISDAHAGLKAAVAQQFTGSSWQRCRVHFMR
MUL_4584|M.ulcerans_Agy99 YWLAVLTELKNRGVADIFFLVCDGLKGLPDSVSAVFPDTVVQTCIIHLIR
:* .* .** **::.: :::.*. ** :: : .: * * :*::*
MAV_5116|M.avium_104 NVLAQVPKGSAEMVAAAIRTVFAQPDAEHVREQLDTIAGMLGRQFPKVET
Mvan_0585|M.vanbaalenii_PYR-1 NVLAQVPKGSAEMVAAAIRTIFAQPDAEHVREQLDTIAGMLGRQFPKVET
TH_2000|M.thermoresistible__bu NLHTAVAAKHAPAVTAAVKTIFAHTDPDEVAAQWDRVADTLAGSFPKVAA
Mflv_3191|M.gilvum_PYR-GCK NLHTAVAAKHAPAVTAAVKTIFAHTDPVEVAAQWDRVADTLAPSFPKVAA
Mb3461c|M.bovis_AF2122/97 NLYTAVAAKHAPAVTVAVKTIFAHTDPEEVGAQWDRVADPLCQP------
Rv3431c|M.tuberculosis_H37Rv NLYTAVAAKHAPAVTVAVKTIFAHTDPEEVGAQWDRVADPLCQP------
MSMEG_4154|M.smegmatis_MC2_155 NLHGVVAAKHAPAVTAAVKTIFAHTDPVDVAAQWDQVADTLAASFPKVAA
MUL_4584|M.ulcerans_Agy99 GTFRYAGRQHHTAIARALKPIYTAVNAAAAAEALDAFDTEWGHRYPAAIR
. . :: *::.::: :. . * .
MAV_5116|M.avium_104 MLREAAADITAFADFPVAHWKKIWSTNPLERLNKEIKRRTDVVGVFPNPA
Mvan_0585|M.vanbaalenii_PYR-1 MLREAAEDITAFADFPAAHWKKIWSTNPLERLNKEIKRRTDVVGVFPNPA
TH_2000|M.thermoresistible__bu MMGEAKTDVLAFTAFPRAHWQKIWSNNPIERLNKEIKRRADVVEIFPNPA
Mflv_3191|M.gilvum_PYR-GCK MMGEAKTDVLAFTAFPRAHWQKIWSNNPIERLNKEIKRRADVVEIFPNPA
Mb3461c|M.bovis_AF2122/97 --------------------------------------------------
Rv3431c|M.tuberculosis_H37Rv --------------------------------------------------
MSMEG_4154|M.smegmatis_MC2_155 MMDEAKADVLAFTAFPRTHWQKIWSNNPIVIC-------SAAVSVFY---
MUL_4584|M.ulcerans_Agy99 LWRNAWNEFIPFLDYDTEIRKVICSTNAIESLNARYRRAIRARGHFPTEQ
MAV_5116|M.avium_104 ALLRLAGSVLVEAHDEWQVADKRYLSETSLALLDVSD-QSAETIAPTAAL
Mvan_0585|M.vanbaalenii_PYR-1 ALLRLAGSVLVEAHDEWQVADKRYLSETSLALLDTGE-QDTQTVAPTAAL
TH_2000|M.thermoresistible__bu AFLRLATAVVIEAHDEWQVTRRYLSDVSMDELRIVIEKKHAAAALAKQHQ
Mflv_3191|M.gilvum_PYR-GCK AFLRLATAVVIEAHDEWQVTRRYLSDISMDELRVVIEKKHAAAALAKQHQ
Mb3461c|M.bovis_AF2122/97 --------------------------------------------------
Rv3431c|M.tuberculosis_H37Rv --------------------------------------------------
MSMEG_4154|M.smegmatis_MC2_155 ---------VDHEGSEWSVLR-SGCGYLQPSMKQILEGRCACCEGGFTAL
MUL_4584|M.ulcerans_Agy99 SALKCLYLVTRSLDPTGTGQKRWTMRWKPALNAFAITFADRMPGSETT--
MAV_5116|M.avium_104 TA
Mvan_0585|M.vanbaalenii_PYR-1 TA
TH_2000|M.thermoresistible__bu IA
Mflv_3191|M.gilvum_PYR-GCK IT
Mb3461c|M.bovis_AF2122/97 --
Rv3431c|M.tuberculosis_H37Rv --
MSMEG_4154|M.smegmatis_MC2_155 VA
MUL_4584|M.ulcerans_Agy99 --