For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTQDHSALLAQLDALKSADAGAVFAELIRAGLQALIEAEATEVIGAGRYQRTDGRATHRNGHRPKTVSTT AGDVEVQIPKLRAGSFFPSLLERRRRIDRALHAVIMEAYVHGVSTRSVDDLVAALGVGSGVSKSEVSRIC AGLDKEIDAFRTRSLNHTSFPYVFCDATFCKVRIGAHVVSQALVVATGVSIDGTREVLGTAVGDSESFEF WREFLASLKARGLSGVHLVISDAHAGLKAAVAQQFTGSSWQRCRVHFMRNLHGVVAAKHAPAVTAAVKTI FAHTDPVDVAAQWDQVADTLAASFPKVAAMMDEAKADVLAFTAFPRTHWQKIWSNNPIVICSAAVSVFYV DHEGSEWSVLRSGCGYLQPSMKQILEGRCACCEGGFTALVA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4154 | - | - | 100% (391) | transposase, Mutator family protein |
M. smegmatis MC2 155 | MSMEG_4159 | - | 1e-31 | 29.51% (349) | IS6120, transposase |
M. smegmatis MC2 155 | MSMEG_1731 | - | 1e-31 | 29.51% (349) | IS6120, transposase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3461c | - | 1e-143 | 89.93% (278) | transposase |
M. gilvum PYR-GCK | Mflv_3191 | - | 1e-177 | 91.42% (338) | transposase, mutator type |
M. tuberculosis H37Rv | Rv3431c | - | 1e-143 | 89.93% (278) | hypothetical protein Rv3431c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_5116 | - | 1e-109 | 58.28% (338) | transposase, Mutator family protein |
M. thermoresistible (build 8) | TH_2000 | - | 1e-167 | 91.77% (316) | PROBABLE TRANSPOSASE |
M. ulcerans Agy99 | MUL_4531 | - | 1e-32 | 29.19% (322) | transposase for IS2606 |
M. vanbaalenii PYR-1 | Mvan_0585 | - | 1e-110 | 59.17% (338) | transposase, mutator type |
CLUSTAL 2.0.9 multiple sequence alignment MAV_5116|M.avium_104 MVKRPRITTERNIAMALDQSALLEVLDALRT------------------- Mvan_0585|M.vanbaalenii_PYR-1 --------------MALDQSALLEVLDALRT------------------- Mflv_3191|M.gilvum_PYR-GCK --------------MTQDHSALLAQLDALRS------------------- TH_2000|M.thermoresistible__bu -------------------------------------------------- Mb3461c|M.bovis_AF2122/97 -------------------------------------------------- Rv3431c|M.tuberculosis_H37Rv -------------------------------------------------- MSMEG_4154|M.smegmatis_MC2_155 --------------MTQDHSALLAQLDALKS------------------- MUL_4531|M.ulcerans_Agy99 -MMTKTVVAVQPSQNHEDEAGAVAAIDVPSSRDVDELEVARELVRQAREA MAV_5116|M.avium_104 ----ADAGERITQAAETIYQALIDAELTAFIGASPHERT-ETRSNQRNGS Mvan_0585|M.vanbaalenii_PYR-1 ----ADAGERITQACEIVYQALIDAELTAKIGAALHERT-ETRSNQRNGS Mflv_3191|M.gilvum_PYR-GCK ----ADAGAVFAELIRAGLQQLIEAEATAAIGAGRYQRT-DGRMVHRNGH TH_2000|M.thermoresistible__bu ---------VFAELIRAGLQQLIEAEATAAIGAGRYERT-DGRTVHRNGH Mb3461c|M.bovis_AF2122/97 ---------MFAELIRAGLQALIEAEATEAIGAGRYERS-DGRIVHRNGH Rv3431c|M.tuberculosis_H37Rv ---------MFAELIRAGLQALIEAEATEAIGAGRYERS-DGRIVHRNGH MSMEG_4154|M.smegmatis_MC2_155 ----ADAGAVFAELIRAGLQALIEAEATEVIGAGRYQRT-DGRATHRNGH MUL_4531|M.ulcerans_Agy99 GVGLTGPGGLLKAMTKTVIETALDEELSEHLGYDRHDRAGYGSGNSRNGT : . : :: * : :* ::*: *** MAV_5116|M.avium_104 RPRTLSTVAG-DLELRIPKLRTGSFFPALLERRRRVDQCLFAVVMEAYLH Mvan_0585|M.vanbaalenii_PYR-1 RPRTLSTVAG-DLELRIPKLRSGSFFPALLERRRRVDQCLFAVVMEAYLH Mflv_3191|M.gilvum_PYR-GCK RPKTVSTTSG-DIEVQIPKLRAGSFFPSLLERRRRIDKALHAVIMEAYVH TH_2000|M.thermoresistible__bu RPKTVSTTSG-DIEVQIPKLRAGSFFPSLLERRRRIDRALHAVIMEAYVH Mb3461c|M.bovis_AF2122/97 RPKTVSTTAG-DIEVQIPKLRAGSFFPSLLERRRRIDKALHAVIMEAYVH Rv3431c|M.tuberculosis_H37Rv RPKTVSTTAG-DIEVQIPKLRAGSFFPSLLERRRRIDKALHAVIMEAYVH MSMEG_4154|M.smegmatis_MC2_155 RPKTVSTTAG-DVEVQIPKLRAGSFFPSLLERRRRIDRALHAVIMEAYVH MUL_4531|M.ulcerans_Agy99 RSKTVLTDACGSIEIDVPRDRAGTFEPKIVEKRQRRLTDVDEVVLSLYAR *.:*: * : .:*: :*: *:*:* * ::*:*:* : *::. * : MAV_5116|M.avium_104 GTSTRKVDDLVKALGTDTGISKSEVSRICKDLDTEVAAFRDRPLGDQRFP Mvan_0585|M.vanbaalenii_PYR-1 GTSTRKVDDLVKALGADSGISKSEVSRICKDLDTEVGAFRDRPLGEQRFP Mflv_3191|M.gilvum_PYR-GCK GVSTRSVDDLVAAMGVESGVSKSEVSRICAGLDIEIEAFRTRSLAHTEFP TH_2000|M.thermoresistible__bu GVSTRSVDDLVTAMGVGSGVSKSEVSRICAGLDEEIEAFRIRSLAHTQFP Mb3461c|M.bovis_AF2122/97 GVSTRSVDDLVAAMGVQAGVSKSEVSRICAGLDTEIEAFRTRSLTHTEFP Rv3431c|M.tuberculosis_H37Rv GVSTRSVDDLVAAMGVQAGVSKSEVSRICAGLDTEIEAFRTRSLTHTEFP MSMEG_4154|M.smegmatis_MC2_155 GVSTRSVDDLVAALGVGSGVSKSEVSRICAGLDKEIDAFRTRSLNHTSFP MUL_4531|M.ulcerans_Agy99 GLTTGEISAHFAHI-YDAAVSKDTVSRITDRVLEEITAWHTRPLER-VYA * :* .:. . : :.:**. **** : *: *:: *.* :. MAV_5116|M.avium_104 YVFLDATYCKARVNHRVVSQAVVIATGVAADGRREVLGFEVG--DSEDGA Mvan_0585|M.vanbaalenii_PYR-1 YVFLDATYCKARVNHRVVSQAVVIATGVAADGRREVLGFEVG--DSEDGA Mflv_3191|M.gilvum_PYR-GCK YIFCDATFCKVRVGAHVVSQALVVATGVSIDGTREVLGTAVG--DSESFE TH_2000|M.thermoresistible__bu YVFCDATFCKVRIGAHVVSQALVVATGVSIDGTREVLGTAVG--DSESFE Mb3461c|M.bovis_AF2122/97 YVFCDATFCKVRVGAHVVSQALVVATGVSIDGTREVLGTAVG--DSESYE Rv3431c|M.tuberculosis_H37Rv YVFCDATFCKVRVGAHVVSQALVVATGVSIDGTREVLGTAVG--DSESYE MSMEG_4154|M.smegmatis_MC2_155 YVFCDATFCKVRIGAHVVSQALVVATGVSIDGTREVLGTAVG--DSESFE MUL_4531|M.ulcerans_Agy99 AVFIDALHVKIRD-GQVGPRPVYAAVGVDLAGHRDVLGMWAGEGDGESAK :* ** . * * :* .:.: *.** * *:*** .* *.*. MAV_5116|M.avium_104 FWTAFLRSLKSRGLAGVQLVISDAHAGLRSAIDAVLIGAAWQRCRVHFLR Mvan_0585|M.vanbaalenii_PYR-1 FWTAFLRSLKSRGLAGVQLVISDAHAGLRAAIDAVLIGSAWQRCRVHFLR Mflv_3191|M.gilvum_PYR-GCK FWREFLASLKARGLTGVHLVISDAHVGLKTAVAQQFTNSSWQRCRVHFMR TH_2000|M.thermoresistible__bu FWREFLASLKARGLSGVHLVVSDAHAGLKAAVAQQFTNSSWQRCRVHFMR Mb3461c|M.bovis_AF2122/97 FWREFLASLKARGLTGVHLVISDAHAGLKAAVAQQFSGASWQRCRVHFMR Rv3431c|M.tuberculosis_H37Rv FWREFLASLKARGLTGVHLVISDAHAGLKAAVAQQFSGASWQRCRVHFMR MSMEG_4154|M.smegmatis_MC2_155 FWREFLASLKARGLSGVHLVISDAHAGLKAAVAQQFTGSSWQRCRVHFMR MUL_4531|M.ulcerans_Agy99 YWLAVLTELKNRGVADIFFLVCDGLKGLPDSVSAVFPDTVVQTCIIHLIR :* .* .** **::.: :::.*. ** :: : .: * * :*::* MAV_5116|M.avium_104 NVLAQVPKGSAEMVAAAIRTVFAQPDAEHVREQLDTIAGMLGRQFPKVET Mvan_0585|M.vanbaalenii_PYR-1 NVLAQVPKGSAEMVAAAIRTIFAQPDAEHVREQLDTIAGMLGRQFPKVET Mflv_3191|M.gilvum_PYR-GCK NLHTAVAAKHAPAVTAAVKTIFAHTDPVEVAAQWDRVADTLAPSFPKVAA TH_2000|M.thermoresistible__bu NLHTAVAAKHAPAVTAAVKTIFAHTDPDEVAAQWDRVADTLAGSFPKVAA Mb3461c|M.bovis_AF2122/97 NLYTAVAAKHAPAVTVAVKTIFAHTDPEEVGAQWDRVADPLCQP------ Rv3431c|M.tuberculosis_H37Rv NLYTAVAAKHAPAVTVAVKTIFAHTDPEEVGAQWDRVADPLCQP------ MSMEG_4154|M.smegmatis_MC2_155 NLHGVVAAKHAPAVTAAVKTIFAHTDPVDVAAQWDQVADTLAASFPKVAA MUL_4531|M.ulcerans_Agy99 GTFRYAGRQHHTAIARALKPIYTAVNAAAAAEALDAFDTEWGHRYPAAIR . . :: *::.::: :. . * . MAV_5116|M.avium_104 MLREAAADITAFADFPVAHWKKIWSTNPLERLNKEIKRRTDVVGVFPNPA Mvan_0585|M.vanbaalenii_PYR-1 MLREAAEDITAFADFPAAHWKKIWSTNPLERLNKEIKRRTDVVGVFPNPA Mflv_3191|M.gilvum_PYR-GCK MMGEAKTDVLAFTAFPRAHWQKIWSNNPIERLNKEIKRRADVVEIFPNPA TH_2000|M.thermoresistible__bu MMGEAKTDVLAFTAFPRAHWQKIWSNNPIERLNKEIKRRADVVEIFPNPA Mb3461c|M.bovis_AF2122/97 -------------------------------------------------- Rv3431c|M.tuberculosis_H37Rv -------------------------------------------------- MSMEG_4154|M.smegmatis_MC2_155 MMDEAKADVLAFTAFPRTHWQKIWSNNPIVIC-------SAAVSVFY--- MUL_4531|M.ulcerans_Agy99 LWRNAWNEFIPFLDYDTEIRKVICSTNAIEWLNARYRRAIRARGHFPTEQ MAV_5116|M.avium_104 ALLRLAGSVLVEAHDEWQVADKRYLSETSLALLDVSD-QSAETIAPTAAL Mvan_0585|M.vanbaalenii_PYR-1 ALLRLAGSVLVEAHDEWQVADKRYLSETSLALLDTGE-QDTQTVAPTAAL Mflv_3191|M.gilvum_PYR-GCK AFLRLATAVVIEAHDEWQVTRRYLSDISMDELRVVIEKKHAAAALAKQHQ TH_2000|M.thermoresistible__bu AFLRLATAVVIEAHDEWQVTRRYLSDVSMDELRIVIEKKHAAAALAKQHQ Mb3461c|M.bovis_AF2122/97 -------------------------------------------------- Rv3431c|M.tuberculosis_H37Rv -------------------------------------------------- MSMEG_4154|M.smegmatis_MC2_155 ---------VDHEGSEWSVLR-SGCGYLQPSMKQILEGRCACCEGGFTAL MUL_4531|M.ulcerans_Agy99 SALKCLYLVTRSLDPTGTGQKRWTMRWKPALNAFAITFADRMPGSETT-- MAV_5116|M.avium_104 TA Mvan_0585|M.vanbaalenii_PYR-1 TA Mflv_3191|M.gilvum_PYR-GCK IT TH_2000|M.thermoresistible__bu IA Mb3461c|M.bovis_AF2122/97 -- Rv3431c|M.tuberculosis_H37Rv -- MSMEG_4154|M.smegmatis_MC2_155 VA MUL_4531|M.ulcerans_Agy99 --