For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2560 | - | - | 100% (354) | transposase, mutator type |
| M. thermoresistible (build 8) | TH_2000 | - | 3e-70 | 45.57% (316) | PROBABLE TRANSPOSASE |
| M. thermoresistible (build 8) | TH_3008 | - | 7e-27 | 29.02% (317) | PUTATIVE transposase, mutator type |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3142 | - | 1e-160 | 80.24% (339) | transposase |
| M. gilvum PYR-GCK | Mflv_2876 | - | 0.0 | 94.99% (339) | transposase, mutator type |
| M. tuberculosis H37Rv | Rv3115 | - | 1e-160 | 80.24% (339) | transposase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_4291 | - | 1e-127 | 65.78% (339) | transposase, Mutator family protein |
| M. smegmatis MC2 155 | MSMEG_4154 | - | 1e-70 | 45.57% (316) | transposase, Mutator family protein |
| M. ulcerans Agy99 | MUL_4029 | - | 9e-20 | 26.07% (326) | transposase for IS2606 |
| M. vanbaalenii PYR-1 | Mvan_3590 | - | 0.0 | 93.48% (353) | transposase, mutator type |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3142|M.bovis_AF2122/97 -----------------------------MTSSHLIDTEQLLADQLAQAS
Rv3115|M.tuberculosis_H37Rv -----------------------------MTSSHLIDAEQLLADQLAQAS
TH_2560|M.thermoresistible__bu -----------------------------MTTAHNIDLPTVLAERLTTTH
Mvan_3590|M.vanbaalenii_PYR-1 ------MILR------ETDQSFSSKGTDAMTTAHNIDLPTVLAERLTTAH
Mflv_2876|M.gilvum_PYR-GCK ------MILR------ETVQSHSSKGIDAMTTAHNIDLPTVLAERLTTAH
MAV_4291|M.avium_104 ---MSVMDVKRPPRDPSSQPSTESSRSPTMTAPHIVDPAGLLGEALAEAS
MSMEG_4154|M.smegmatis_MC2_155 -----------------------------MTQDHSALLAQLDALKSADAG
MUL_4029|M.ulcerans_Agy99 MMTKTVVVVQPSQNHEDEAGAVAAIDVPSSRDVDELEVARELVRQAREAG
. :
Mb3142|M.bovis_AF2122/97 P------DLLRGLLSTFIAALMGAEADALCGAGYRERS-DERSNQRNGYR
Rv3115|M.tuberculosis_H37Rv P------DLLRGLLSTFIAALMGAEADALCGAGYRERS-DERSNQRNGYR
TH_2560|M.thermoresistible__bu P------DVLRELLATFIHTLMGAEADALCGAGYGERS-AERTNSRNGYR
Mvan_3590|M.vanbaalenii_PYR-1 P------DVLRELLATFIHTLMGAEADALCGAGYGERS-TERTNSRNGYR
Mflv_2876|M.gilvum_PYR-GCK P------DVLRELLATFIHTLMGAEADALCGAGYGERS-AERTNSRNGYR
MAV_4291|M.avium_104 P------DLMRSLLQTVINALLSADADAVVGAEWGQPT-PGRRAQRNGYR
MSMEG_4154|M.smegmatis_MC2_155 -------AVFAELIRAGLQALIEAEATEVIGAGRYQRT-DGRATHRNGHR
MUL_4029|M.ulcerans_Agy99 VGLTGPGGLLKAMTKTVIETALDEELSEHLGYDRHDRAGYGSGNSRNGTR
:: : : : : : : * : : *** *
Mb3142|M.bovis_AF2122/97 HRDFDTRAA-TIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLL
Rv3115|M.tuberculosis_H37Rv HRDFDTRAA-TIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLL
TH_2560|M.thermoresistible__bu HRRFDTRAG-SLDLAIPKLRHGSYFPDWLLERRKRAERALTTVVATCYLL
Mvan_3590|M.vanbaalenii_PYR-1 HRQFDTRAG-SLDLAIPKLRHGSYFPDWLLERRKRAERALTTVVATCYLL
Mflv_2876|M.gilvum_PYR-GCK HRQFDTRAG-TLDLAIPKLRQGSYFPDWLLERRKRAERALTTVVATCYLL
MAV_4291|M.avium_104 HRGLDTRVG-TIDVAVPKLRKGTYFPDWLLERRKRAESALITVVADCYLA
MSMEG_4154|M.smegmatis_MC2_155 PKTVSTTAG-DVEVQIPKLRAGSFFPS-LLERRRRIDRALHAVIMEAYVH
MUL_4029|M.ulcerans_Agy99 SKTVLTDACGSIEIDVPRDRAGTFEPK-IVEKRQRRLTDVDEVVLSLYAR
: . * . ::: :*: * *:: *. ::::*:* : *: *
Mb3142|M.bovis_AF2122/97 GVSTRRMERLVETLGVTK-LSKSQVSIMAKELDEAVEAFRTRPLD-AGPY
Rv3115|M.tuberculosis_H37Rv GVSTRRMERLVETLGVTK-LSKSQVSIMAKELDEAVEAFRTRPLD-AGPY
TH_2560|M.thermoresistible__bu GVSTRRMDKLVETLGITS-LSKSQVSVMATELDTAVEAFRTRPLD-AGPY
Mvan_3590|M.vanbaalenii_PYR-1 GVSTRRMDKLVETLGITS-LSKSQVSVMAKELDAAVEAFRTRPLD-AGPY
Mflv_2876|M.gilvum_PYR-GCK GVSTRRMDKLVETLGITS-LSKSQVSVMAKELDAAVEAFRTRPLD-AGPY
MAV_4291|M.avium_104 GVSTRRMDKLVKTLGIDS-LSKSQVSRMATDLDEHVEAFRHRPLDSAGPF
MSMEG_4154|M.smegmatis_MC2_155 GVSTRSVDDLVAALGVGSGVSKSEVSRICAGLDKEIDAFRTRSLN-HTSF
MUL_4029|M.ulcerans_Agy99 GLTTGEISAHFAHIYDAA-VSKDTVSRITDRVLEEMTAWHTRPLE--RVY
*::* :. . : :**. ** : : : *:: *.*: :
Mb3142|M.bovis_AF2122/97 TFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVT--SAEDG
Rv3115|M.tuberculosis_H37Rv TFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVT--SAEDG
TH_2560|M.thermoresistible__bu TFVAADALVLKVREQGRVVNVHALIATGVNAEGYREILGVDVT--TAEDG
Mvan_3590|M.vanbaalenii_PYR-1 TFVAADALVLKVREGGRVVNVHALIAVGVNAEGHREILGIDVS--TAEDG
Mflv_2876|M.gilvum_PYR-GCK TFVAADALVLKVREAGRVVNVHALIAVGVNAEGYREILGIDVT--TAEDG
MAV_4291|M.avium_104 TFVAADALTMKVREGGRVVNGVVLLATGVNGDGHREVLGMRVV--TSETG
MSMEG_4154|M.smegmatis_MC2_155 PYVFCDATFCKVRIGAHVVSQALVVATGVSIDGTREVLGTAVG--DSESF
MUL_4029|M.ulcerans_Agy99 AAVFIDALHVKIRD-GQVGPRPVYAAVGVDLAGHRDVLGMWAGEGDGESA
. : ** *:* .:* *.**. * *::** . .*
Mb3142|M.bovis_AF2122/97 AGWLAFFRDLVARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYA
Rv3115|M.tuberculosis_H37Rv AGWLAFFRDLVARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYA
TH_2560|M.thermoresistible__bu AGWLAFWRSLTARGLSGVKLVTSDAHTGLVAAIGATLPGATWQRCRTHYT
Mvan_3590|M.vanbaalenii_PYR-1 AGWLTFWRSLTARGLSGVKLVTSDAHAGLVAAIGATLPGAAWQRCRTHYT
Mflv_2876|M.gilvum_PYR-GCK AGWLTFWRSLTARGLSGVKLVTSDAHAGLVAAIGATLPGAAWQRCRTHYT
MAV_4291|M.avium_104 PAWNEFFADLVARGLAGVRLVTSDAHAGLREAIAANLPGAAWQRCRTHYA
MSMEG_4154|M.smegmatis_MC2_155 EFWREFLASLKARGLSGVHLVISDAHAGLKAAVAQQFTGSSWQRCRVHFM
MUL_4029|M.ulcerans_Agy99 KYWLAVLTELKNRGVADIFFLVCDGLKGLPDSVSAVFPDTVVQTCIIHLI
* . .* **::.: :: .*. ** ::. :. : * * *
Mb3142|M.bovis_AF2122/97 ANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDALTDKLPAVA
Rv3115|M.tuberculosis_H37Rv ANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDALTDKLPAVA
TH_2560|M.thermoresistible__bu TNLMAVTPKSSWPWVRTLLHSVFDQPDAESVAAQYDRIIDALVDKLPKVA
Mvan_3590|M.vanbaalenii_PYR-1 TNLMAVTPKSSWPWVRTLLHSVFDQPDAESVAAQYDRIIEALADKLPKVA
Mflv_2876|M.gilvum_PYR-GCK TNLMSVTPKSSWPWVRTLLHSVFDQPDAESVAAQYDRIIDALSDKLPNVA
MAV_4291|M.avium_104 ANLMSICPKSMWPAVKAMLHSVYDQPDAPAVAAQFDRLIDYVTDKLPAVA
MSMEG_4154|M.smegmatis_MC2_155 RNLHGVVAAKHAPAVTAAVKTIFAHTDPVDVAAQWDQVADTLAASFPKVA
MUL_4029|M.ulcerans_Agy99 RGTLRYPGRQHHTAIARALKPIYTAVNAAAAAEALDAFDTEWGHRYPAAI
. . : ::.:: :. .. * . * .
Mb3142|M.bovis_AF2122/97 EHLDTARTDLLAFTAFPKQIWRQIWSNNPQERLNREVRRRTDVVGIFPDR
Rv3115|M.tuberculosis_H37Rv EHLDTARTDLLAFTAFPKQIWRQIWSNNPQERLNREVRRRTDVVGIFPDR
TH_2560|M.thermoresistible__bu DHLQAARPDLLAFTAFPKQIWRQIWSNNP---------------------
Mvan_3590|M.vanbaalenii_PYR-1 DHLEEARADLLAFTAFPKQIWRQIWSNNP---------------------
Mflv_2876|M.gilvum_PYR-GCK DHLEAARPDLLAFTAFPKQIWRQIWSNNPQERLNKEIRRRTDVVGIFPDR
MAV_4291|M.avium_104 DHLATAREDILAFTAFPKDVWSQIWSNNPAERLNKEIRRRTDAVGIFPNR
MSMEG_4154|M.smegmatis_MC2_155 AMMDEAKADVLAFTAFPRTHWQKIWSNNP---------------------
MUL_4029|M.ulcerans_Agy99 RLWRTAWNEFIPFLDYDTEIRKVICSTNAIESLNARYRRAIRARGHFPTE
* :.:.* : * *.*.
Mb3142|M.bovis_AF2122/97 ASIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTSTEEPAKQQTTN
Rv3115|M.tuberculosis_H37Rv ASIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTSTEEPAKQQTTN
TH_2560|M.thermoresistible__bu -------------------------------------RSVN-RPSHDTIM
Mvan_3590|M.vanbaalenii_PYR-1 -------------------------------------LSVN-RPSGDTVQ
Mflv_2876|M.gilvum_PYR-GCK AALIRLVGAVLAEQHDEWAESRRYLGLDVLSKS----RTVNDTPTEQEAT
MAV_4291|M.avium_104 DAIVRLVGAVLAEQNDEWAEGRRYLGLDILTRCR-LTTITDDNPDIGAND
MSMEG_4154|M.smegmatis_MC2_155 --IVICSAAVSVFYVDHEGSEWSVLRSGCGYLQPSMKQILEGRCACCEGG
MUL_4029|M.ulcerans_Agy99 QSALKCLYLVTRSLDPTGTGQKRWTMRWKPALNAFAITFADRMPGSETT-
:
Mb3142|M.bovis_AF2122/97 TPALTT
Rv3115|M.tuberculosis_H37Rv TPALTT
TH_2560|M.thermoresistible__bu GAA---
Mvan_3590|M.vanbaalenii_PYR-1 AAA---
Mflv_2876|M.gilvum_PYR-GCK PAALPA
MAV_4291|M.avium_104 MPALTA
MSMEG_4154|M.smegmatis_MC2_155 FTALVA
MUL_4029|M.ulcerans_Agy99 ------