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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1958 | - | - | 100% (292) | transcriptional regulator, XRE family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0023 | - | 6e-06 | 31.01% (129) | transcriptional regulatory protein |
| M. gilvum PYR-GCK | Mflv_3292 | - | 7e-99 | 74.49% (243) | XRE family transcriptional regulator |
| M. tuberculosis H37Rv | Rv0023 | - | 6e-06 | 31.01% (129) | transcriptional regulatory protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4641 | - | 3e-05 | 27.34% (128) | putative DNA-binding protein |
| M. marinum M | MMAR_3947 | - | 3e-06 | 32.54% (126) | transcriptional regulatory protein |
| M. avium 104 | MAV_0041 | - | 2e-05 | 36.08% (97) | helix-turn-helix domain-containing protein |
| M. smegmatis MC2 155 | MSMEG_3525 | - | 1e-105 | 75.20% (250) | transcriptional regulator, XRE family protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_3014 | - | 1e-103 | 76.11% (247) | XRE family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
TH_1958|M.thermoresistible__bu ------VESRPASGHDAEVTRTAAPAFGAMLRDWRRRRRLSQLDLALEAG
MSMEG_3525|M.smegmatis_MC2_155 -----------------MTSTVPGTSIGSLVRQWRQRRRISQLDLAIEAD
Mflv_3292|M.gilvum_PYR-GCK ------------------------------MRGWRRRRRLSQLELALHAG
Mvan_3014|M.vanbaalenii_PYR-1 ----MAPHGRASQTGTVTSVQRPPMTFGAMMRDWRRRRRLSQLDLALAAG
Mb0023|M.bovis_AF2122/97 ---------------------MSRESAGAAIRALRESRDWSLADLAAATG
Rv0023|M.tuberculosis_H37Rv ---------------------MSRESAGAAIRALRESRDWSLADLAAATG
MAV_0041|M.avium_104 ---------------------MSRESAGAAIRALRESRDWSLADLAAATG
MMAR_3947|M.marinum_M -----------------------MPNRGGFVHAARERAGLTCRELAEKAG
MAB_4641|M.abscessus_ATCC_1997 MAGTDERRRELGAFLRVRREHLVRADYGLPPVGRSRTTGLRREEIAYLSG
. ::* :.
TH_1958|M.thermoresistible__bu VSARHVSFMETGR-AAPSRTMVLRLAEVLEVPPREQNGLLVAAGYAPVYA
MSMEG_3525|M.smegmatis_MC2_155 VSPRHVSFIETGR-AQPSRAMVLRLAEALDVPRREQNQLLLAAGLAPVYA
Mflv_3292|M.gilvum_PYR-GCK VSARHISFIETGR-AKPSRAMVLRLSSVLGVPQRDQNAMLIAAGLAPAYT
Mvan_3014|M.vanbaalenii_PYR-1 VSARHVSFIETGR-SAPSRAMVLRLATVLDVPQREQNRLFVAAGLAPVYG
Mb0023|M.bovis_AF2122/97 VSTMGLSYLERGA-RKPHKSTVQKVENGLGLPPGTYSRLLVAADPDAELA
Rv0023|M.tuberculosis_H37Rv VSTMGLSYLERGA-RKPHKSTVQKVENGLGLPPGTYSRLLVAADPDAELA
MAV_0041|M.avium_104 VSIMGLSYLERGA-RKPHKSTVQKIENGLGLPPGTYSRLLVAADPEAELA
MMAR_3947|M.marinum_M CSLRYVHDIEQG--CSPSIRVLNGLVRALQLSAWEQRFLFAACG------
MAB_4641|M.abscessus_ATCC_1997 VSVTWYTWLEQGRDINPSRQVLEAIALEMRLSAAERTYLLELAGFAP-LP
* :* * * : : : :. :: ..
TH_1958|M.thermoresistible__bu ERDLDDP-EMAAVRHGVQRVLDAHDPYPCVAVDRGWRVVQTNAGAAVLLD
MSMEG_3525|M.smegmatis_MC2_155 ERSLDDP-EMTAVRDGLTRVLDAYDPYPCVAVDREWNLLRANAGAGVMLD
Mflv_3292|M.gilvum_PYR-GCK ERSLDAP-DMAAVRAGVARVLDAYEPFPCVVVTRGWWILQTNAGAGVLLD
Mvan_3014|M.vanbaalenii_PYR-1 ERSLQAP-DMAAVRAGVQMVLAAYDPYPCVMVDRGWWILQANPGASILLD
Mb0023|M.bovis_AF2122/97 RLIAAQPSNPTAVRRAGAVVVDRHS---DTDVLEGYAEAQLDA-IKSVID
Rv0023|M.tuberculosis_H37Rv RLIAAQPSNPTAVRRAGAVVVDRHS---DTDVLEGYAEAQLDA-IKSVID
MAV_0041|M.avium_104 RLMAAQPVAEMPARRTGPVVVDRHS---DTEVLEGYAEAQLDA-LKSVID
MMAR_3947|M.marinum_M -RILPDP--ALTDTDISQRYLDALQPHPAAALHPSWRFKAWNQQWQRLFQ
MAB_4641|M.abscessus_ATCC_1997 HSATPDP---APVPDHLLRLVENLVPSPAFVVSADWSIGGWNRAYELLYP
* . : : : : :
TH_1958|M.thermoresistible__bu GVADHLLEQPNALRIALHPDGLAPRIRNLAQWRHHLIS------RLRREV
MSMEG_3525|M.smegmatis_MC2_155 GVAPHLLERPNALRITLHPEGMAPRIRNLAEWRHHLIS------RLRREV
Mflv_3292|M.gilvum_PYR-GCK GVAAHLLERPNALRIALHPDGLAPRIGNLAQWRTHLIE------RLRREV
Mvan_3014|M.vanbaalenii_PYR-1 GVAPHLLDRPNALRIALHPDGLAPRIRNLAQWRTHLVE------RLRREV
Mb0023|M.bovis_AF2122/97 RLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHL
Rv0023|M.tuberculosis_H37Rv RLPATTSNEYETYILSVIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHL
MAV_0041|M.avium_104 RLPATTSNEYETYILSVIAQCVKAELLAASSWRVAVNAGADSTGRLMEHL
MMAR_3947|M.marinum_M GVLLAPS-MHQWLYLSTTSRRILRNWDEVSQWCVGWLR-------YGLAV
MAB_4641|M.abscessus_ATCC_1997 GIASIVPADRNLLRFIFTDPYVRQMLPDWPITSRRFLA-----EYRAEAG
: : : : .
TH_1958|M.thermoresistible__bu ALSRAPGAVALLAEIESYPGGFD---DPGDLGGVVVPLELYTTSRRLLSF
MSMEG_3525|M.smegmatis_MC2_155 AVSGSGGLAALLAEIESYPGGFA---TKHDLGGVAVPLELDTGRGEVLTF
Mflv_3292|M.gilvum_PYR-GCK AVDGCAELDRLLAEIESYPGGFE---HSPDLGGVAVPLVLRTTGGRTLRF
Mvan_3014|M.vanbaalenii_PYR-1 DTAGSAELADLLAEIDSYPGGFD---DSPDLGSVAVPLELVTEDGRLLRF
Mb0023|M.bovis_AF2122/97 RALEATRGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDI
Rv0023|M.tuberculosis_H37Rv RALEATRGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDI
MAV_0041|M.avium_104 QALEATRVALLKRMPTSLSARFDRACAQSSLPETIIAALVGVDVDEMWDI
MMAR_3947|M.marinum_M DVDAVKPMVSALMPVTEFR---------REWEAQVIPVDPAT---RLWVV
MAB_4641|M.abscessus_ATCC_1997 ALLGDPRHRALVDRLQQQSPEFARAWAEHEVGRFTSRERRFHHPEAGELI
. . .
TH_1958|M.thermoresistible__bu LSTVTTFGTALDLTAAELSIEAFLPADERTASALAGPTSPAAASFPDPDT
MSMEG_3525|M.smegmatis_MC2_155 LSTVTTFGTALDLTAAELSVEAFLPADEQTAAALRG--------------
Mflv_3292|M.gilvum_PYR-GCK LSTVTTFGTALDLTAAELSVEAFLPADDATAAALR---------------
Mvan_3014|M.vanbaalenii_PYR-1 LSMVTTFGTALDLTAAELSIEAFLPADDETAASLR---------------
Mb0023|M.bovis_AF2122/97 RNRGVIPAGALPRVRAFVDAIEAS--HDADEGQQ----------------
Rv0023|M.tuberculosis_H37Rv RNRGVIPAGALPRVRAFVDAIEAS--HDADEGQQ----------------
MAV_0041|M.avium_104 RNRGVISPSALPRVRAFTDAVESASRDEASQGDDEEGS------------
MMAR_3947|M.marinum_M RDGGTELRIDMRFWHASPMPGGLLLGVILDAG------------------
MAB_4641|M.abscessus_ATCC_1997 FEHHRLSPSDLPDLHIVIYLPLDGTNTRTKLEALLSGGR-----------
. :
TH_1958|M.thermoresistible__bu GTAAARQP
MSMEG_3525|M.smegmatis_MC2_155 --------
Mflv_3292|M.gilvum_PYR-GCK --------
Mvan_3014|M.vanbaalenii_PYR-1 --------
Mb0023|M.bovis_AF2122/97 --------
Rv0023|M.tuberculosis_H37Rv --------
MAV_0041|M.avium_104 --------
MMAR_3947|M.marinum_M --------
MAB_4641|M.abscessus_ATCC_1997 --------