For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSRESAGAAIRALRESRDWSLADLAAATGVSTMGLSYLERGARKPHKSTVQKVENGLGLPPGTYSRLLVA ADPDAELARLIAAQPSNPTAVRRAGAVVVDRHSDTDVLEGYAEAQLDAIKSVIDRLPATTSNEYETYILS VIAQCVKAEMLAASSWRVAVNAGADSTGRLMEHLRALEATRGALLERMPTSLSARFDRACAQSSLPEAVV AALIGVGADEMWDIRNRGVIPAGALPRVRAFVDAIEASHDADEGQQ
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0023 | - | - | 100% (256) | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN |
M. tuberculosis H37Rv | Rv3863 | - | 3e-07 | 23.36% (244) | hypothetical protein Rv3863 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0023 | - | 1e-141 | 100.00% (256) | transcriptional regulatory protein |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4084c | - | 7e-06 | 32.80% (125) | transcriptional regulator |
M. marinum M | MMAR_0042 | - | 1e-118 | 83.92% (255) | transcriptional regulatory protein |
M. avium 104 | MAV_0041 | - | 1e-120 | 86.33% (256) | helix-turn-helix domain-containing protein |
M. smegmatis MC2 155 | MSMEG_0052 | - | 5e-10 | 22.95% (244) | hypothetical protein MSMEG_0052 |
M. thermoresistible (build 8) | TH_2085 | - | 1e-07 | 26.34% (224) | HYPOTHETICAL ALANINE RICH PROTEIN |
M. ulcerans Agy99 | MUL_0041 | - | 1e-116 | 80.61% (263) | transcriptional regulatory protein |
M. vanbaalenii PYR-1 | Mvan_3014 | - | 3e-05 | 38.46% (65) | XRE family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Rv0023|M.tuberculosis_H37Rv -----------------MSRESAGAAIRALRESRDWSLADLAAATGVSTM Mb0023|M.bovis_AF2122/97 -----------------MSRESAGAAIRALRESRDWSLADLAAATGVSTM MAV_0041|M.avium_104 -----------------MSRESAGAAIRALRESRDWSLADLAAATGVSIM MMAR_0042|M.marinum_M -----------------MSRESAGAAIRALRESHDWSLADLAAATGVSIM MUL_0041|M.ulcerans_Agy99 -----------------MSRESAGAAIRALRESHDWSLADLAAATGVSIM MSMEG_0052|M.smegmatis_MC2_155 --MTDAEFDLA-TGEFDVGLVRAGAAAAARRRELDISQRSLAADGIINAG TH_2085|M.thermoresistible__bu --MTDVDLTASPVSEVDPGLARAGAAAAARRRELNISQRRLAAEGIINAG MAB_4084c|M.abscessus_ATCC_199 -----MPQESDLATAVSNAASDIGGFIRAQREAAQVSVRQLAEKAGVSNP Mvan_3014|M.vanbaalenii_PYR-1 MAPHGRASQTGTVTSVQRPPMTFGAMMRDWRRRRRLSQLDLALAAGVSAR *. *. * ** :. Rv0023|M.tuberculosis_H37Rv GLSYLERGARKPHKSTVQKVENGLGLPPGTYSRLLVAADPDAELARLIAA Mb0023|M.bovis_AF2122/97 GLSYLERGARKPHKSTVQKVENGLGLPPGTYSRLLVAADPDAELARLIAA MAV_0041|M.avium_104 GLSYLERGARKPHKSTVQKIENGLGLPPGTYSRLLVAADPEAELARLMAA MMAR_0042|M.marinum_M GLSYLERGARKPHKGTVQKVENGLGLPPGTYSRLLVAADPEAELARLLAA MUL_0041|M.ulcerans_Agy99 GLSYLERGARKPHKGTVQKVENGLGLPPGTYSRMLVAADPEAELARLLAA MSMEG_0052|M.smegmatis_MC2_155 ALIAFEKGRSWPRERTRLKLEEVLRWPPGTIARLRQGGSVPTTSAPVAPP TH_2085|M.thermoresistible__bu ALIAFEKGRSWPRERTRAKLEQVLRWPPGTIARLRAGEDVGPAGGPATGA MAB_4084c|M.abscessus_ATCC_199 YLSQIERGLRRPSAEVLNQIAKALRVS-AEVLYVRAGILDRSDASPVRDA Mvan_3014|M.vanbaalenii_PYR-1 HVSFIETGRSAPSRAMVLRLATVLDVPQREQNRLFVAAGLAPVYGERSLQ : :* * * :: * . : . . . Rv0023|M.tuberculosis_H37Rv QPSNPTAVRRAGAVVVDR-------HSDTDVLEGYAEAQLDAIKSVIDRL Mb0023|M.bovis_AF2122/97 QPSNPTAVRRAGAVVVDR-------HSDTDVLEGYAEAQLDAIKSVIDRL MAV_0041|M.avium_104 QPVAEMPARRTGPVVVDR-------HSDTEVLEGYAEAQLDALKSVIDRL MMAR_0042|M.marinum_M RPTETASPRRPGVVVVDR-------HSDTDVLEGYAEAQLDALRSVIDRL MUL_0041|M.ulcerans_Agy99 RPTETASPRRRGVVVVDR-------HSDTDVLEGYAEAQLDALRSVIDRL MSMEG_0052|M.smegmatis_MC2_155 PPPEPPAAAPAPVTS-VP------AADEVPLIAQAVLTAVHTLETTINAM TH_2085|M.thermoresistible__bu QEPSATRTDQADYRPNAPGSDHGGSDDEVPLVAQAVLAAVNTLDDASEAL MAB_4084c|M.abscessus_ATCC_199 IIADTFITERQKQVLLDVY---------SSFVQQNAEAQSDVAESDLE-L Mvan_3014|M.vanbaalenii_PYR-1 APDMAAVRAGVQMVLAAYDPYPCVMVDRGWWILQANPGASILLDGVAPHL : : Rv0023|M.tuberculosis_H37Rv PATTSNEYETYILSVIAQCVK--AEMLAASSWRVAVNAGADSTGRLMEHL Mb0023|M.bovis_AF2122/97 PATTSNEYETYILSVIAQCVK--AEMLAASSWRVAVNAGADSTGRLMEHL MAV_0041|M.avium_104 PATTSNEYETYILSVIAQCVK--AELLAASSWRVAVNAGADSTGRLMEHL MMAR_0042|M.marinum_M PASTSNEYETYILSVVAQCVK--AEMLAASSWRVAVNAGSESSARLMEHL MUL_0041|M.ulcerans_Agy99 PASTSNEYDTYILSVVAQCVK--AEMLAASSWRVAVNAGSESSARLMEHL MSMEG_0052|M.smegmatis_MC2_155 PPESDPDFVPRVTAILGDLRQ--LEAVASRAARISM-VTPPLIKALSAVR TH_2085|M.thermoresistible__bu PDVDHPEFTPRLTKILADLRQ--LEAVAARAARISR-VSPRVIKALSAVR MAB_4084c|M.abscessus_ATCC_199 PATTE--------------------------------------------- Mvan_3014|M.vanbaalenii_PYR-1 LDRPNALRIALHPDGLAPRIRNLAQWRTHLVERLRREVDTAGSAELADLL Rv0023|M.tuberculosis_H37Rv RALEATRGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDI Mb0023|M.bovis_AF2122/97 RALEATRGALLERMPTSLSARFDRACAQSSLPEAVVAALIGVGADEMWDI MAV_0041|M.avium_104 QALEATRVALLKRMPTSLSARFDRACAQSSLPETIIAALVGVDVDEMWDI MMAR_0042|M.marinum_M QALEATRTALLERMPASLSARFDRACAQSQLPDAVIAALIGVDSDELWDI MUL_0041|M.ulcerans_Agy99 QALEATRTALLERMPASLSARFDRACALSQLPDAVIAALIGVDSDELWDI MSMEG_0052|M.smegmatis_MC2_155 RQIDELTMRAANAPGATLGQRLYAARRQANLTVAETAQAAGVSEDAIART TH_2085|M.thermoresistible__bu RSIDELTLRGARAPQATLGQRLYAARRGANLTIEETAQAAGVPAEVIIAA MAB_4084c|M.abscessus_ATCC_199 -------------------------------------------------- Mvan_3014|M.vanbaalenii_PYR-1 AEIDSYPGGFDDSPDLGSVAVPLELVTEDGRLLRFLSMVTTFG--TALDL Rv0023|M.tuberculosis_H37Rv RNRGVIPAGALPRVRAFVDAIEAS--HDADEGQQ----- Mb0023|M.bovis_AF2122/97 RNRGVIPAGALPRVRAFVDAIEAS--HDADEGQQ----- MAV_0041|M.avium_104 RNRGVISPSALPRVRAFTDAVESASRDEASQGDDEEGS- MMAR_0042|M.marinum_M RNRGVIPPGALPRIRAFVDGSTESSQQQDPGCDDGEGQR MUL_0041|M.ulcerans_Agy99 RNRGVIPPGALPRIRAFVDGSTESSEQQGPGYDDGEGQR MSMEG_0052|M.smegmatis_MC2_155 EAEYPVDAAAVHAIEALIDSLR----------------- TH_2085|M.thermoresistible__bu EADEPVAATAAGAIETLIAELDQP--------------- MAB_4084c|M.abscessus_ATCC_199 --------------------------------------- Mvan_3014|M.vanbaalenii_PYR-1 TAAELSIEAFLPADDETAASLR-----------------