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M. thermoresistible (build 8) TH_1942 (hypD)

aa seq not available

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. thermoresistible (build 8)	TH_1942	hypD	-	100% (375)	hydrogenase expression/formation protein HypD
M. thermoresistible (build 8)	TH_0227	hypD	0.0	84.35% (377)	hydrogenase expression/formation protein HypD

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	Mflv_3981	-	1e-101	49.04% (363)	hydrogenase expression/formation protein HypD
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	-	-	-	-	-
M. abscessus ATCC 19977	-	-	-	-	-
M. marinum M	MMAR_1857	hypD	0.0	83.07% (378)	hydrogenase-forming protein, HypD
M. avium 104	-	-	-	-	-
M. smegmatis MC2 155	MSMEG_2702	hypD	0.0	90.84% (371)	hydrogenase expression/formation protein HypD
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	Mvan_2405	-	1e-103	49.31% (363)	hydrogenase expression/formation protein HypD

CLUSTAL 2.0.9 multiple sequence alignment


TH_1942|M.thermoresistible__bu      MRFVDEFRDPAAARALVRSITELAGA-----DEFKFMEICGGHTHTIYRH
MSMEG_2702|M.smegmatis_MC2_155      MKFVDEYRDPAAARALVRSITELAAG-----DEFKFMEVCGGHTHTIYRH
MMAR_1857|M.marinum_M               MKFVDEFRDPAAARKLLTAIEHLAHQPGAGPEHFKFMEVCGGHTHTIYRH
Mflv_3981|M.gilvum_PYR-GCK          MKYLDEFSNPELAHRLIEQIEAVATR------RWSIMEVCGGQTHSIIRH
Mvan_2405|M.vanbaalenii_PYR-1       MKYLDEFSNPELAARLIEQITSAATR------RWSIMEVCGGQTHSIIRH
                                    *:::**: :*  *  *:  *   *        .:.:**:***:**:* **

TH_1942|M.thermoresistible__bu      GIEHLLPESVQLVHGPGCPVCVIPMGRIDDAMWLAEQPGIIFTTFGDMMR
MSMEG_2702|M.smegmatis_MC2_155      GIEHLLPESIELVHGPGCPVCVIPMGRVDDAMWLAEQPGVIFTTFGDMMR
MMAR_1857|M.marinum_M               GIEHLLPDNVELVHGPGCPVCVIPMGRIDDAMWLAGQPDVIFTCFGDMMR
Mflv_3981|M.gilvum_PYR-GCK          GIDQLLPDTVEMIHGPGCPVCVTPLEIIDKALDIASRPEVIFCSFGDMLR
Mvan_2405|M.vanbaalenii_PYR-1       GIDQLLPDTVEMIHGPGCPVCVTPLEIIDKALDIASRPDVVFCSFGDMLR
                                    **::***:.::::********* *:  :*.*: :* :* ::*  ****:*

TH_1942|M.thermoresistible__bu      VPGSNGSLLDAKARGADVRFVYSPLDALKVALDNPDRRVVFFAVGFETTA
MSMEG_2702|M.smegmatis_MC2_155      VPGSAGNLIEAKARGADVRFVYSPLDALKIARDNPERHVVFFAVGFETTA
MMAR_1857|M.marinum_M               VPGSDGSLLDAKARGADVRFVYSPLDALKVAIDNPDKQVVFFAIGFETTA
Mflv_3981|M.gilvum_PYR-GCK          VPGSEKDLFRVKSEGADVRVVYSPLDALTIARDNPDRQVVFFGIGFETTA
Mvan_2405|M.vanbaalenii_PYR-1       VPGSEKDLFRVKSEGGDVRVVYSPLDALTIAREHPDKQVVFFGIGFETTA
                                    ****  .*: .*:.*.***.********.:* ::*:::****.:******

TH_1942|M.thermoresistible__bu      PSTAVTLVRARELGVRNFSVFCNHVTIVPPIKAILESPDLRLSGFLGPGH
MSMEG_2702|M.smegmatis_MC2_155      PSTAVTLVGARALGVRNFSVFCNHVTIVPPIKAILESPDLRLSGFLGPGH
MMAR_1857|M.marinum_M               PSTAVTLVRARDLELPNFSVFCNHVTIVPPIKAILESPDLRLSGFIGPGH
Mflv_3981|M.gilvum_PYR-GCK          PANAMTVYQAKKLGIENFSLLVSHVLVPPAIAAIMESPTCRVQAFLAAGH
Mvan_2405|M.vanbaalenii_PYR-1       PANAMTVYQARRLGIDNFSLLVSHVLVPPAISAIMESPTCRVQAFLAAGH
                                    *:.*:*:  *: * : ***:: .** : *.* **:***  *:..*:..**

TH_1942|M.thermoresistible__bu      VSTVVGLRPYRFVPAVYGKPLVVAGFEPLDILASVHMLLRQIRDGRCEVE
MSMEG_2702|M.smegmatis_MC2_155      VSTVVGLRPYRFVPGVYGKPIVVAGFEPLDILASVHMLLQQIRDGRCEVE
MMAR_1857|M.marinum_M               VSTVVGNRPYRFVPEVYHKPLVVAGFEPLDILASVTMLLRQIREGRCEVE
Mflv_3981|M.gilvum_PYR-GCK          VCTVMGTDEYPPLCDKYGTPIVVTGFEPLDILEGIRRTVIQLEAGRHELE
Mvan_2405|M.vanbaalenii_PYR-1       VCAVMGTDEYPPLCDKYGIPIVVTGFEPLDILEGIRRTVVQLESGRHELE
                                    *.:*:*   *  :   *  *:**:******** .:   : *:. ** *:*

TH_1942|M.thermoresistible__bu      NQYRRVVRPEGNTQALKLLATTFELRPHFEWRGLGFISQSALKIHRDFAD
MSMEG_2702|M.smegmatis_MC2_155      NQYTRVVRPEGNVAALKLMAETFELRPHFEWRGLGFISQSALKIHPDYAG
MMAR_1857|M.marinum_M               NQYKRVVPEEGNPAALALMGKVFALRPHFEWRGLGFISQSALRLSDDFAE
Mflv_3981|M.gilvum_PYR-GCK          NAYPRAVQDTGNPAAKAMLLDVFDVTDR-TWRGIGMIASSGWRLSPAYRH
Mvan_2405|M.vanbaalenii_PYR-1       NAYPRAVREAGNPAAKAMLLDVFELTDR-AWRGIGVIPGSGWRLSHAYRD
                                    * * *.*   **  *  ::  .* :  :  ***:*.*. *. ::   :  

TH_1942|M.thermoresistible__bu      HDAELVFDMPGVRVADPKACQCGEVLKGVIKPWECKVFGTACTPETPIGT
MSMEG_2702|M.smegmatis_MC2_155      YDAELIFDMPGVRVADPKACQCGEVLKGVIKPWECKVFGTACTPETPIGT
MMAR_1857|M.marinum_M               FDAELRFAMPGVRVADPKACQCGEVLKGVLKPWECKVFGTACTPETPIGT
Mflv_3981|M.gilvum_PYR-GCK          FDAEHRFAATDLHNEESAICRSGEVLQGLIKPHECTAFGTSCTPRNPLGA
Mvan_2405|M.vanbaalenii_PYR-1       YDAEQRFAVSDIHTEESAVCRSGEVLQGLIKPHECAAFGTVCTPRNPLGA
                                    .***  *  ..::  :.  *:.****:*::** ** .*** ***..*:*:

TH_1942|M.thermoresistible__bu      CMVSAEGACAAYYNFGRLHRETAQLLGQG---
MSMEG_2702|M.smegmatis_MC2_155      CMVSPEGACAAYYNFGRLHRDTAQLLLRR---
MMAR_1857|M.marinum_M               CMVSPEGACAAYYNFGRLHRDAVKLVGQSGRA
Mflv_3981|M.gilvum_PYR-GCK          TMVSSEGACAAYYLYRRLEVTHA---------
Mvan_2405|M.vanbaalenii_PYR-1       TMVSSEGACAAYYLYRRLEVTNA---------
                                     ***.******** : **.   .