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KFVDEYRDPAAARALVRSITELAAGDEFKFMEVCGGHTHTIYRHGIEHLLPESIELVHGPGCPVCVIPMG RVDDAMWLAEQPGVIFTTFGDMMRVPGSAGNLIEAKARGADVRFVYSPLDALKIARDNPERHVVFFAVGF ETTAPSTAVTLVGARALGVRNFSVFCNHVTIVPPIKAILESPDLRLSGFLGPGHVSTVVGLRPYRFVPGV YGKPIVVAGFEPLDILASVHMLLQQIRDGRCEVENQYTRVVRPEGNVAALKLMAETFELRPHFEWRGLGF ISQSALKIHPDYAGYDAELIFDMPGVRVADPKACQCGEVLKGVIKPWECKVFGTACTPETPIGTCMVSPE GACAAYYNFGRLHRDTAQLLLRR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_2702 | hypD | - | 100% (374) | hydrogenase expression/formation protein HypD |
| M. smegmatis MC2 155 | MSMEG_2275 | hypD | e-104 | 51.52% (363) | hydrogenase expression/formation protein HypD |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3981 | - | 1e-105 | 50.69% (363) | hydrogenase expression/formation protein HypD |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1857 | hypD | 0.0 | 82.45% (376) | hydrogenase-forming protein, HypD |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_1942 | hypD | 0.0 | 90.84% (371) | hydrogenase expression/formation protein HypD |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2405 | - | 1e-105 | 50.69% (363) | hydrogenase expression/formation protein HypD |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_2702|M.smegmatis_MC2_155 MKFVDEYRDPAAARALVRSITELAAG-----DEFKFMEVCGGHTHTIYRH
TH_1942|M.thermoresistible__bu MRFVDEFRDPAAARALVRSITELAGA-----DEFKFMEICGGHTHTIYRH
MMAR_1857|M.marinum_M MKFVDEFRDPAAARKLLTAIEHLAHQPGAGPEHFKFMEVCGGHTHTIYRH
Mflv_3981|M.gilvum_PYR-GCK MKYLDEFSNPELAHRLIEQIEAVATR------RWSIMEVCGGQTHSIIRH
Mvan_2405|M.vanbaalenii_PYR-1 MKYLDEFSNPELAARLIEQITSAATR------RWSIMEVCGGQTHSIIRH
*:::**: :* * *: * * .:.:**:***:**:* **
MSMEG_2702|M.smegmatis_MC2_155 GIEHLLPESIELVHGPGCPVCVIPMGRVDDAMWLAEQPGVIFTTFGDMMR
TH_1942|M.thermoresistible__bu GIEHLLPESVQLVHGPGCPVCVIPMGRIDDAMWLAEQPGIIFTTFGDMMR
MMAR_1857|M.marinum_M GIEHLLPDNVELVHGPGCPVCVIPMGRIDDAMWLAGQPDVIFTCFGDMMR
Mflv_3981|M.gilvum_PYR-GCK GIDQLLPDTVEMIHGPGCPVCVTPLEIIDKALDIASRPEVIFCSFGDMLR
Mvan_2405|M.vanbaalenii_PYR-1 GIDQLLPDTVEMIHGPGCPVCVTPLEIIDKALDIASRPDVVFCSFGDMLR
**::***:.::::********* *: :*.*: :* :* ::* ****:*
MSMEG_2702|M.smegmatis_MC2_155 VPGSAGNLIEAKARGADVRFVYSPLDALKIARDNPERHVVFFAVGFETTA
TH_1942|M.thermoresistible__bu VPGSNGSLLDAKARGADVRFVYSPLDALKVALDNPDRRVVFFAVGFETTA
MMAR_1857|M.marinum_M VPGSDGSLLDAKARGADVRFVYSPLDALKVAIDNPDKQVVFFAIGFETTA
Mflv_3981|M.gilvum_PYR-GCK VPGSEKDLFRVKSEGADVRVVYSPLDALTIARDNPDRQVVFFGIGFETTA
Mvan_2405|M.vanbaalenii_PYR-1 VPGSEKDLFRVKSEGGDVRVVYSPLDALTIAREHPDKQVVFFGIGFETTA
**** .*: .*:.*.***.********.:* ::*:::****.:******
MSMEG_2702|M.smegmatis_MC2_155 PSTAVTLVGARALGVRNFSVFCNHVTIVPPIKAILESPDLRLSGFLGPGH
TH_1942|M.thermoresistible__bu PSTAVTLVRARELGVRNFSVFCNHVTIVPPIKAILESPDLRLSGFLGPGH
MMAR_1857|M.marinum_M PSTAVTLVRARDLELPNFSVFCNHVTIVPPIKAILESPDLRLSGFIGPGH
Mflv_3981|M.gilvum_PYR-GCK PANAMTVYQAKKLGIENFSLLVSHVLVPPAIAAIMESPTCRVQAFLAAGH
Mvan_2405|M.vanbaalenii_PYR-1 PANAMTVYQARRLGIDNFSLLVSHVLVPPAISAIMESPTCRVQAFLAAGH
*:.*:*: *: * : ***:: .** : *.* **:*** *:..*:..**
MSMEG_2702|M.smegmatis_MC2_155 VSTVVGLRPYRFVPGVYGKPIVVAGFEPLDILASVHMLLQQIRDGRCEVE
TH_1942|M.thermoresistible__bu VSTVVGLRPYRFVPAVYGKPLVVAGFEPLDILASVHMLLRQIRDGRCEVE
MMAR_1857|M.marinum_M VSTVVGNRPYRFVPEVYHKPLVVAGFEPLDILASVTMLLRQIREGRCEVE
Mflv_3981|M.gilvum_PYR-GCK VCTVMGTDEYPPLCDKYGTPIVVTGFEPLDILEGIRRTVIQLEAGRHELE
Mvan_2405|M.vanbaalenii_PYR-1 VCAVMGTDEYPPLCDKYGIPIVVTGFEPLDILEGIRRTVVQLESGRHELE
*.:*:* * : * *:**:******** .: : *:. ** *:*
MSMEG_2702|M.smegmatis_MC2_155 NQYTRVVRPEGNVAALKLMAETFELRPHFEWRGLGFISQSALKIHPDYAG
TH_1942|M.thermoresistible__bu NQYRRVVRPEGNTQALKLLATTFELRPHFEWRGLGFISQSALKIHRDFAD
MMAR_1857|M.marinum_M NQYKRVVPEEGNPAALALMGKVFALRPHFEWRGLGFISQSALRLSDDFAE
Mflv_3981|M.gilvum_PYR-GCK NAYPRAVQDTGNPAAKAMLLDVFDVTDR-TWRGIGMIASSGWRLSPAYRH
Mvan_2405|M.vanbaalenii_PYR-1 NAYPRAVREAGNPAAKAMLLDVFELTDR-AWRGIGVIPGSGWRLSHAYRD
* * *.* ** * :: .* : : ***:*.*. *. :: :
MSMEG_2702|M.smegmatis_MC2_155 YDAELIFDMPGVRVADPKACQCGEVLKGVIKPWECKVFGTACTPETPIGT
TH_1942|M.thermoresistible__bu HDAELVFDMPGVRVADPKACQCGEVLKGVIKPWECKVFGTACTPETPIGT
MMAR_1857|M.marinum_M FDAELRFAMPGVRVADPKACQCGEVLKGVLKPWECKVFGTACTPETPIGT
Mflv_3981|M.gilvum_PYR-GCK FDAEHRFAATDLHNEESAICRSGEVLQGLIKPHECTAFGTSCTPRNPLGA
Mvan_2405|M.vanbaalenii_PYR-1 YDAEQRFAVSDIHTEESAVCRSGEVLQGLIKPHECAAFGTVCTPRNPLGA
.*** * ..:: :. *:.****:*::** ** .*** ***..*:*:
MSMEG_2702|M.smegmatis_MC2_155 CMVSPEGACAAYYNFGRLHRDTAQLLLRR---
TH_1942|M.thermoresistible__bu CMVSAEGACAAYYNFGRLHRETAQLLGQG---
MMAR_1857|M.marinum_M CMVSPEGACAAYYNFGRLHRDAVKLVGQSGRA
Mflv_3981|M.gilvum_PYR-GCK TMVSSEGACAAYYLYRRLEVTHA---------
Mvan_2405|M.vanbaalenii_PYR-1 TMVSSEGACAAYYLYRRLEVTNA---------
***.******** : **. .