For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0285 | - | - | 100% (373) | ferric iron-binding periplasmic protein of ABC transporter |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1888 | modA | 1e-07 | 26.69% (281) | molybdate-binding lipoprotein |
| M. gilvum PYR-GCK | Mflv_3363 | - | 1e-148 | 72.29% (350) | extracellular solute-binding protein |
| M. tuberculosis H37Rv | Rv1857 | modA | 1e-07 | 26.69% (281) | molybdate-binding lipoprotein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_2731 | modA | 3e-05 | 28.07% (228) | molybdate-binding lipoprotein ModA |
| M. avium 104 | MAV_2863 | modA | 7e-06 | 25.75% (299) | molybdate ABC transporter, periplasmic molybdate-binding |
| M. smegmatis MC2 155 | MSMEG_3636 | - | 1e-150 | 77.46% (346) | ferric iron-binding periplasmic protein of ABC transporter |
| M. ulcerans Agy99 | MUL_3022 | modA | 5e-05 | 45.31% (64) | molybdate-binding lipoprotein ModA |
| M. vanbaalenii PYR-1 | Mvan_3093 | - | 1e-145 | 73.49% (347) | extracellular solute-binding protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3363|M.gilvum_PYR-GCK -------------------MSKS-FTRLAGVFGAVAAVLAFS--ACGSQP
Mvan_3093|M.vanbaalenii_PYR-1 -------------------MSN---SRFAGVLAVITAMLALT--ACGSGS
MSMEG_3636|M.smegmatis_MC2_155 ----------------MSLMSKVNSVRSVAVVATVAAAAALTLGACGSGS
TH_0285|M.thermoresistible__bu VRTIFNRAGFNRRGFNRRGFNRRGFNRIAVLLTAAATALALG--ACGSAP
Mb1888|M.bovis_AF2122/97 ------------------------MRWIGLSTGLVSAMLVAGLVACGSNS
Rv1857|M.tuberculosis_H37Rv ------------------------MRWIGLSTGLVSAMLVAGLVACGSNS
MMAR_2731|M.marinum_M ------------------------MTRVGMLAGMVSALLVW-VVGCGS--
MUL_3022|M.ulcerans_Agy99 ------------------------------------------MVGCGS--
MAV_2863|M.avium_104 ------------------------MRRIGILTGLLSVVLIAGMTGCGS--
.***
Mflv_3363|M.gilvum_PYR-GCK ---------AGEDADKIVVYSGRSEE-LVKPLIEQFTT-DTGIQVETRYA
Mvan_3093|M.vanbaalenii_PYR-1 ---------QSEDADKIVVYAGRSEA-LIAPLIEQFTA-DTGIEVEARYA
MSMEG_3636|M.smegmatis_MC2_155 D--------EADSADKIVVYSGRSEN-LVAPLIEKFTS-DTGIEVETRYA
TH_0285|M.thermoresistible__bu ESDTDGQTTAEAAGEKLVVYSGRNEQ-LVAPLIERFST-DTGIEVDVRYA
Mb1888|M.bovis_AF2122/97 PASS--PAGPTQGARSIVVFAAASLQSAFTQIGEQFKAGNPGVNVNFAFA
Rv1857|M.tuberculosis_H37Rv PASS--PAGPTQGARSIVVFAAASLQSAFTQIGEQFKAGNPGVNVNFAFA
MMAR_2731|M.marinum_M ------PSRPADGARSITIFAAASLKTAFTQIGERFKTANPGVGVELDFA
MUL_3022|M.ulcerans_Agy99 ------PSRPAEGARSITIFAAASLKTAFTQIGERFKTANPGVGVELDFA
MAV_2863|M.avium_104 ------KSQPPPTAGKLMVFAAASLRPAFTQIAERFKAQNPGTGIEFEFA
. .: :::. . . : *:*.: :.* :: :*
Mflv_3363|M.gilvum_PYR-GCK GSGELAAQLLTEGDKSPADVFLSQDAGALGAVSKAGLFAPINADALAAVP
Mvan_3093|M.vanbaalenii_PYR-1 GSGELAAQLITEGDKSPADVFLSQDAGALGAVSKAGLFAPISPDTLAAVP
MSMEG_3636|M.smegmatis_MC2_155 GSGELAAQLITEGDKSPADVFLSQDAGALGAVSEAGLFAPINDEAMAAVP
TH_0285|M.thermoresistible__bu GSGELAAQLITEGDRSPADVFLSQDAGALGAVTEAGLFTPIDPETLAKVP
Mb1888|M.bovis_AF2122/97 GSSELATQLTQG---ATADVFASADTAQMDSVAKAGLLA--------GHP
Rv1857|M.tuberculosis_H37Rv GSSELATQLTQG---ATADVFASADTAQMDSVAKAGLLA--------GHP
MMAR_2731|M.marinum_M GSSELATQLTQG---ATADVFASADTAQMDTVAKAGLLA--------ADP
MUL_3022|M.ulcerans_Agy99 GSSELATQLTQG---ATADVFASADTAQMDTVAKAGLLA--------ADP
MAV_2863|M.avium_104 GSSELATQLTQG---ATADVFASADTAQMDVVAKAGLLA--------ADP
**.***:** :.**** * *:. :. *::***:: *
Mflv_3363|M.gilvum_PYR-GCK KQYSAADGTWLGVSGRARVIVYNPTLVPDPPDTIDGLLAPEWKG-KIGFA
Mvan_3093|M.vanbaalenii_PYR-1 AQYSAADGTWVGVSGRARVIVYNPTLAPNPPDTIDGLLAPEWKG-KIGFA
MSMEG_3636|M.smegmatis_MC2_155 ANFSAADKSWLGVSGRARVLVYNPDIAPNPPDTIDGLLAPEWKG-KIGFA
TH_0285|M.thermoresistible__bu AHFSAADGTWLGVSGRARVVVYNPDLAPEPPDTIDGLLDPQWAGGKIGFA
Mb1888|M.bovis_AF2122/97 TNFATNTMVIVAAAG--------------NPKKIRSFADLTRPG-----L
Rv1857|M.tuberculosis_H37Rv TNFATNTMVIVAAAG--------------NPKKIRSFADLTRPG-----L
MMAR_2731|M.marinum_M TNFASNTLVIVTAPG--------------NPKHVGSFADLSRSD-----L
MUL_3022|M.ulcerans_Agy99 TNFASNTLVIVTAPG--------------NPKHVGSFADLSRSD-----L
MAV_2863|M.avium_104 TNFASNTLVIVTAPG--------------NPKRIGSFADLARPG-----L
:::: : ..* *. : .: .
Mflv_3363|M.gilvum_PYR-GCK PSNASWQAFVTGLRVIRGDDGAEQWLRAFKAQDPQAFENNVAIRDAVDAG
Mvan_3093|M.vanbaalenii_PYR-1 PSNASWQAFVTGLRVLRGDDGAERWLRAFKDQDPQAFENNVAVRDAVNSG
MSMEG_3636|M.smegmatis_MC2_155 PSNASWQSFVTGLRVIRGDDGARQWLEAFKAQDPQPYENNVAVRDAVDAG
TH_0285|M.thermoresistible__bu PSNASWQSFVTGLRVLRGEDGARQWLEAFKAQEPQAYENNVAVRDAVDAG
Mb1888|M.bovis_AF2122/97 NVVVCQPSVPCGSATRRIEDATGIHLNPVSEELSVTDVLNKVITGQADAG
Rv1857|M.tuberculosis_H37Rv NVVVCQPSVPCGSATRRIEDATGIHLNPVSEELSVTDVLNKVITGQADAG
MMAR_2731|M.marinum_M TVVVCQQQVPCGAATQRIEDGTGVHLNPVSEELSVTDVLNKVTTGQADAA
MUL_3022|M.ulcerans_Agy99 IVVVCQQQVPCGAATQRIEDGTGVHLNRVSEELSVTDVLNKVTTGQADAA
MAV_2863|M.avium_104 TVVTCQRPVPCGAAAHRVEDSTGVHLNPVSEEPSVTDALTKVTSGQADAA
.. . * . * :*.: *. .. : . . . . . .::.
Mflv_3363|M.gilvum_PYR-GCK QIPLGIANHYYLYELINAKGADAVTARNQFMAPGDPGGLVNVAGVGVLKS
Mvan_3093|M.vanbaalenii_PYR-1 QIPLGLVNHYYLYELINSKGPDAVVAENKFMAPGDPGGLINVAGVGVLKA
MSMEG_3636|M.smegmatis_MC2_155 QIPLGVVNHYYLYELVDAKGEQAVKARNKFMAPGDPGGLINVAGVGVLKS
TH_0285|M.thermoresistible__bu QIPLGLVNHYYLYELIKAKGADAVVAENQYMAPGDPGGLINVAGVGVLKT
Mb1888|M.bovis_AF2122/97 --------------LVYVSDALSVATKVTCVRFPEAAGVVNVYAIAVLKR
Rv1857|M.tuberculosis_H37Rv --------------LVYVSDALSVATKVTCVRFPEAAGVVNVYAIAVLKR
MMAR_2731|M.marinum_M --------------LVYLTDAMSAGSTVSTIKFPQAAPAVNVYPIAVLSN
MUL_3022|M.ulcerans_Agy99 --------------LVYLTDAMSAGSTVSTIKFPQAAPAVNVYPIAVLSN
MAV_2863|M.avium_104 --------------LVYVTDARTAGSKVATVNFPEAAGAVNVYPIGVLKQ
*: .. :. : : :.. :** :.**.
Mflv_3363|M.gilvum_PYR-GCK APNPEGAQAFASYLIGETAQKYFAEETAEYPLVAGVATSSEMPPLADLRP
Mvan_3093|M.vanbaalenii_PYR-1 APNPEGAQEFAKYLVGESAQKYFAQETAEYPLLASVPPSAEMPALADLAP
MSMEG_3636|M.smegmatis_MC2_155 AANPEGAQAFASYLIGKSAQEYFAGETKEYPLIEGVEPSGEMPQLSELQP
TH_0285|M.thermoresistible__bu ASNPEAAQRFAAYLVEKDAQEYFAEETSEYPLIDGVPAGPEMPPLADLQP
Mb1888|M.bovis_AF2122/97 TSQPALARQFVAMVTAAAGRRILDQSGFAKP-------------------
Rv1857|M.tuberculosis_H37Rv TSQPALARQFVAMVTAAAGRRILDQSGFAKP-------------------
MMAR_2731|M.marinum_M APQPGLARKFVDMVTAETGRRILDQSGFAKP-------------------
MUL_3022|M.ulcerans_Agy99 APQPGLARKFVDMVTAETGRRILDQSGFAKP-------------------
MAV_2863|M.avium_104 APLATQARNFVDLVTSPPGQQILAQAGFAKP-------------------
:. . *: *. : .:. : *
Mflv_3363|M.gilvum_PYR-GCK PAVDLSQLDDIETTQEMLVETGLLTN
Mvan_3093|M.vanbaalenii_PYR-1 PAVDLSQLDDIEATQELLVKTGLLTN
MSMEG_3636|M.smegmatis_MC2_155 PAVDLSQLSDLEATQELLVETGLLTN
TH_0285|M.thermoresistible__bu PEVDLSQLSDLEATQELLVETGLLTN
Mb1888|M.bovis_AF2122/97 --------------------------
Rv1857|M.tuberculosis_H37Rv --------------------------
MMAR_2731|M.marinum_M --------------------------
MUL_3022|M.ulcerans_Agy99 --------------------------
MAV_2863|M.avium_104 --------------------------