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M. gilvum PYR-GCK Mflv_3363 (-)

annotation: extracellular solute-binding protein
coordinates: 3548156 - 3549184
length: 342

SKSFTRLAGVFGAVAAVLAFSACGSQPAGEDADKIVVYSGRSEELVKPLIEQFTTDTGIQVETRYAGSGE
LAAQLLTEGDKSPADVFLSQDAGALGAVSKAGLFAPINADALAAVPKQYSAADGTWLGVSGRARVIVYNP
TLVPDPPDTIDGLLAPEWKGKIGFAPSNASWQAFVTGLRVIRGDDGAEQWLRAFKAQDPQAFENNVAIRD
AVDAGQIPLGIANHYYLYELINAKGADAVTARNQFMAPGDPGGLVNVAGVGVLKSAPNPEGAQAFASYLI
GETAQKYFAEETAEYPLVAGVATSSEMPPLADLRPPAVDLSQLDDIETTQEMLVETGLLTN*

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. gilvum PYR-GCK Mflv_3363 - - 100% (342) extracellular solute-binding protein
M. gilvum PYR-GCK Mflv_2858 - 6e-53 36.83% (334) extracellular solute-binding protein
M. gilvum PYR-GCK Mflv_1080 - 5e-10 22.61% (283) extracellular solute-binding protein

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb1888 modA 2e-07 40.95% (105) molybdate-binding lipoprotein
M. tuberculosis H37Rv Rv1857 modA 2e-07 40.95% (105) molybdate-binding lipoprotein
M. leprae Br4923 - - - - -
M. abscessus ATCC 19977 MAB_1501 - 5e-10 23.81% (294) ABC transporter periplasmic protein
M. marinum M MMAR_2731 modA 4e-08 28.92% (287) molybdate-binding lipoprotein ModA
M. avium 104 MAV_2863 modA 2e-06 25.78% (287) molybdate ABC transporter, periplasmic molybdate-binding
M. smegmatis MC2 155 MSMEG_3636 - 1e-153 80.00% (330) ferric iron-binding periplasmic protein of ABC transporter
M. thermoresistible (build 8) TH_0285 - 1e-148 72.29% (350) ferric iron-binding periplasmic protein of ABC transporter
M. ulcerans Agy99 MUL_3022 modA 2e-06 43.68% (87) molybdate-binding lipoprotein ModA
M. vanbaalenii PYR-1 Mvan_3093 - 1e-164 82.30% (339) extracellular solute-binding protein

CLUSTAL 2.0.9 multiple sequence alignment


Mb1888|M.bovis_AF2122/97            ------------------------MRWIGLSTGLVSAMLVAGLVACGSNS
Rv1857|M.tuberculosis_H37Rv         ------------------------MRWIGLSTGLVSAMLVAGLVACGSNS
MMAR_2731|M.marinum_M               ------------------------MTRVGMLAGMVSALLVW-VVGCGS--
MUL_3022|M.ulcerans_Agy99           ------------------------------------------MVGCGS--
MAV_2863|M.avium_104                ------------------------MRRIGILTGLLSVVLIAGMTGCGS--
Mflv_3363|M.gilvum_PYR-GCK          -------------------MSKS-FTRLAGVFGAVAAVLAFS--ACGSQP
Mvan_3093|M.vanbaalenii_PYR-1       -------------------MSN---SRFAGVLAVITAMLALT--ACGSGS
MSMEG_3636|M.smegmatis_MC2_155      ----------------MSLMSKVNSVRSVAVVATVAAAAALTLGACGSGS
TH_0285|M.thermoresistible__bu      VRTIFNRAGFNRRGFNRRGFNRRGFNRIAVLLTAAATALALG--ACGSAP
MAB_1501|M.abscessus_ATCC_1997      ---------------------MKSPWWMQILKWASIAVLVAAVSACGGTG
                                                                                .**.  

Mb1888|M.bovis_AF2122/97            PASS--PAGPTQGARSIVVFAAASLQSAFTQIGEQFKAGNPGVNVNFAFA
Rv1857|M.tuberculosis_H37Rv         PASS--PAGPTQGARSIVVFAAASLQSAFTQIGEQFKAGNPGVNVNFAFA
MMAR_2731|M.marinum_M               ------PSRPADGARSITIFAAASLKTAFTQIGERFKTANPGVGVELDFA
MUL_3022|M.ulcerans_Agy99           ------PSRPAEGARSITIFAAASLKTAFTQIGERFKTANPGVGVELDFA
MAV_2863|M.avium_104                ------KSQPPPTAGKLMVFAAASLRPAFTQIAERFKAQNPGTGIEFEFA
Mflv_3363|M.gilvum_PYR-GCK          ---------AGEDADKIVVYSGRSEE-LVKPLIEQFTT-DTGIQVETRYA
Mvan_3093|M.vanbaalenii_PYR-1       ---------QSEDADKIVVYAGRSEA-LIAPLIEQFTA-DTGIEVEARYA
MSMEG_3636|M.smegmatis_MC2_155      D--------EADSADKIVVYSGRSEN-LVAPLIEKFTS-DTGIEVETRYA
TH_0285|M.thermoresistible__bu      ESDTDGQTTAEAAGEKLVVYSGRNEQ-LVAPLIERFST-DTGIEVDVRYA
MAB_1501|M.abscessus_ATCC_1997      ---------GGNGPNSVTVYSADGLGRWYQARFHEFSQ-ITGISVNLVEA
                                                   .: :::. .         ..*.   .*  ::   *

Mb1888|M.bovis_AF2122/97            GSSELATQLTQG---ATADVFASADTAQMDSVAKAGLLA--------GHP
Rv1857|M.tuberculosis_H37Rv         GSSELATQLTQG---ATADVFASADTAQMDSVAKAGLLA--------GHP
MMAR_2731|M.marinum_M               GSSELATQLTQG---ATADVFASADTAQMDTVAKAGLLA--------ADP
MUL_3022|M.ulcerans_Agy99           GSSELATQLTQG---ATADVFASADTAQMDTVAKAGLLA--------ADP
MAV_2863|M.avium_104                GSSELATQLTQG---ATADVFASADTAQMDVVAKAGLLA--------ADP
Mflv_3363|M.gilvum_PYR-GCK          GSGELAAQLLTEGDKSPADVFLSQDAGALGAVSKAGLFAPINADALAAVP
Mvan_3093|M.vanbaalenii_PYR-1       GSGELAAQLITEGDKSPADVFLSQDAGALGAVSKAGLFAPISPDTLAAVP
MSMEG_3636|M.smegmatis_MC2_155      GSGELAAQLITEGDKSPADVFLSQDAGALGAVSEAGLFAPINDEAMAAVP
TH_0285|M.thermoresistible__bu      GSGELAAQLITEGDRSPADVFLSQDAGALGAVTEAGLFTPIDPETLAKVP
MAB_1501|M.abscessus_ATCC_1997      GSAEVVSRIAKEKANPQADLLVTLPPFVQKAAGSGLLVG--ADIDIAAVD
                                    **.*:.:::      . **:: :  .     . .. *.            

Mb1888|M.bovis_AF2122/97            TNFATNTMVIVAAAG--------------NPKKIRSFADLTRPG-----L
Rv1857|M.tuberculosis_H37Rv         TNFATNTMVIVAAAG--------------NPKKIRSFADLTRPG-----L
MMAR_2731|M.marinum_M               TNFASNTLVIVTAPG--------------NPKHVGSFADLSRSD-----L
MUL_3022|M.ulcerans_Agy99           TNFASNTLVIVTAPG--------------NPKHVGSFADLSRSD-----L
MAV_2863|M.avium_104                TNFASNTLVIVTAPG--------------NPKRIGSFADLARPG-----L
Mflv_3363|M.gilvum_PYR-GCK          KQYSAADGTWLGVSGRARVIVYNPTLVPDPPDTIDGLLAPEWKG-KIGFA
Mvan_3093|M.vanbaalenii_PYR-1       AQYSAADGTWVGVSGRARVIVYNPTLAPNPPDTIDGLLAPEWKG-KIGFA
MSMEG_3636|M.smegmatis_MC2_155      ANFSAADKSWLGVSGRARVLVYNPDIAPNPPDTIDGLLAPEWKG-KIGFA
TH_0285|M.thermoresistible__bu      AHFSAADGTWLGVSGRARVVVYNPDLAPEPPDTIDGLLDPQWAGGKIGFA
MAB_1501|M.abscessus_ATCC_1997      QRNRDRNGRYVAIVDNYLTFIANPAAALKDPRWDDLLDPRFRGKLQYSTP
                                     .        :   .               *     :             

Mb1888|M.bovis_AF2122/97            NVVVCQPSVPCGSATRRIEDATGIHLNPVSEELSVTDVLNKVITGQADAG
Rv1857|M.tuberculosis_H37Rv         NVVVCQPSVPCGSATRRIEDATGIHLNPVSEELSVTDVLNKVITGQADAG
MMAR_2731|M.marinum_M               TVVVCQQQVPCGAATQRIEDGTGVHLNPVSEELSVTDVLNKVTTGQADAA
MUL_3022|M.ulcerans_Agy99           IVVVCQQQVPCGAATQRIEDGTGVHLNRVSEELSVTDVLNKVTTGQADAA
MAV_2863|M.avium_104                TVVTCQRPVPCGAAAHRVEDSTGVHLNPVSEEPSVTDALTKVTSGQADAA
Mflv_3363|M.gilvum_PYR-GCK          PSNASWQAFVTGLRVIRGDDGAEQWLRAFKAQDPQAFENNVAIRDAVDAG
Mvan_3093|M.vanbaalenii_PYR-1       PSNASWQAFVTGLRVLRGDDGAERWLRAFKDQDPQAFENNVAVRDAVNSG
MSMEG_3636|M.smegmatis_MC2_155      PSNASWQSFVTGLRVIRGDDGARQWLEAFKAQDPQPYENNVAVRDAVDAG
TH_0285|M.thermoresistible__bu      PSNASWQSFVTGLRVLRGEDGARQWLEAFKAQEPQAYENNVAVRDAVDAG
MAB_1501|M.abscessus_ATCC_1997      GQAGDGTAMLVLLQHLMGNQGAVDYLRRLQHNNVGPSSSTGKLQPKVSNG
                                            .         ::.:   *. .. :   .   .      .. .

Mb1888|M.bovis_AF2122/97            --------------LVYVSDALSVATKVTCVRFPEAAGVVNVYAIAVLKR
Rv1857|M.tuberculosis_H37Rv         --------------LVYVSDALSVATKVTCVRFPEAAGVVNVYAIAVLKR
MMAR_2731|M.marinum_M               --------------LVYLTDAMSAGSTVSTIKFPQAAPAVNVYPIAVLSN
MUL_3022|M.ulcerans_Agy99           --------------LVYLTDAMSAGSTVSTIKFPQAAPAVNVYPIAVLSN
MAV_2863|M.avium_104                --------------LVYVTDARTAGSKVATVNFPEAAGAVNVYPIGVLKQ
Mflv_3363|M.gilvum_PYR-GCK          QIPLGIANHYYLYELINAKGADAVTARNQFMAPGDPGGLVNVAGVGVLKS
Mvan_3093|M.vanbaalenii_PYR-1       QIPLGLVNHYYLYELINSKGPDAVVAENKFMAPGDPGGLINVAGVGVLKA
MSMEG_3636|M.smegmatis_MC2_155      QIPLGVVNHYYLYELVDAKGEQAVKARNKFMAPGDPGGLINVAGVGVLKS
TH_0285|M.thermoresistible__bu      QIPLGLVNHYYLYELIKAKGADAVVAENQYMAPGDPGGLINVAGVGVLKT
MAB_1501|M.abscessus_ATCC_1997      E--LWVANGDLQMNLASIREDRSNFSIFIPAARDGKRSTISLPYVAAVTN
                                                  *       :  :             :.:  :..:. 

Mb1888|M.bovis_AF2122/97            -TSQPALARQFVAMVTAAAGRRILDQSGFAKP------------------
Rv1857|M.tuberculosis_H37Rv         -TSQPALARQFVAMVTAAAGRRILDQSGFAKP------------------
MMAR_2731|M.marinum_M               -APQPGLARKFVDMVTAETGRRILDQSGFAKP------------------
MUL_3022|M.ulcerans_Agy99           -APQPGLARKFVDMVTAETGRRILDQSGFAKP------------------
MAV_2863|M.avium_104                -APLATQARNFVDLVTSPPGQQILAQAGFAKP------------------
Mflv_3363|M.gilvum_PYR-GCK          -APNPEGAQAFASYLIGETAQKYFAEETAEYPLVAGVATSSEM-PPLADL
Mvan_3093|M.vanbaalenii_PYR-1       -APNPEGAQEFAKYLVGESAQKYFAQETAEYPLLASVPPSAEM-PALADL
MSMEG_3636|M.smegmatis_MC2_155      -AANPEGAQAFASYLIGKSAQEYFAGETKEYPLIEGVEPSGEM-PQLSEL
TH_0285|M.thermoresistible__bu      -ASNPEAAQRFAAYLVEKDAQEYFAEETSEYPLIDGVPAGPEM-PPLADL
MAB_1501|M.abscessus_ATCC_1997      GAPHVENARKLLAYLLSVPVQRTIPREALGMPVRADVQPEAGANTPAQVL
                                     :.    *: :   :     :. :       *                  

Mb1888|M.bovis_AF2122/97            ------------------------------
Rv1857|M.tuberculosis_H37Rv         ------------------------------
MMAR_2731|M.marinum_M               ------------------------------
MUL_3022|M.ulcerans_Agy99           ------------------------------
MAV_2863|M.avium_104                ------------------------------
Mflv_3363|M.gilvum_PYR-GCK          RPPAVDLSQLDDIETTQEMLVETGLLTN--
Mvan_3093|M.vanbaalenii_PYR-1       APPAVDLSQLDDIEATQELLVKTGLLTN--
MSMEG_3636|M.smegmatis_MC2_155      QPPAVDLSQLSDLEATQELLVETGLLTN--
TH_0285|M.thermoresistible__bu      QPPEVDLSQLSDLEATQELLVETGLLTN--
MAB_1501|M.abscessus_ATCC_1997      EGVRIWHPDWDQVVSTLDASLIAYHQETGS

species	id	gene	e-value	identity (len)	annotation
M. gilvum PYR-GCK	Mflv_3363	-	-	100% (342)	extracellular solute-binding protein
M. gilvum PYR-GCK	Mflv_2858	-	6e-53	36.83% (334)	extracellular solute-binding protein
M. gilvum PYR-GCK	Mflv_1080	-	5e-10	22.61% (283)	extracellular solute-binding protein