For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTASVNSLDLAAIRADFPILKRIMRGGNPLAYLDSGATSQRPLQVLDAEREFLTASNGAVHRGAHQLMEE ATDAYEQGRADIALFVGADTDELVFTKNATEALNLVSYVLGDSRFERAVGPGDVIVTTELEHHANLIPWQ ELARRTGATLRWYGVTDDGRIDLDSLYLDDRVKVVAFTHHSNVTGVLTPVSELVSRAHQSGALTVLDACQ SVPHQPVDLHELGVDFAAFSGHKMLGPNGIGVLYGRRELLAQMPPFLTGGSMIETVTMEGATYAPAPQRF EAGTPMTSQVVGLAAAARYLGAIGMAAVEAHERELVAAAIEGLSGIDGVRILGPTSMRDRGSPVAFVVEG VHAHDVGQVLDDGGVAVRVGHHCALPLHRRFGLAATARASFAVYNTADEVDRLVAGVRRSRHFFGRA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1464 | csd | - | 100% (417) | PROBABLE CYSTEINE DESULFURASE CSD |
M. tuberculosis H37Rv | Rv3025c | iscS | 1e-23 | 28.42% (387) | cysteine desulfurase IscS |
M. tuberculosis H37Rv | Rv3778c | - | 3e-17 | 25.48% (365) | aminotransferase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1499 | csd | 0.0 | 100.00% (417) | cysteine desulfurase |
M. gilvum PYR-GCK | Mflv_3674 | - | 0.0 | 80.29% (416) | SufS subfamily cysteine desulfurase |
M. leprae Br4923 | MLBr_00596 | - | 0.0 | 85.37% (417) | putative aminotransferase |
M. abscessus ATCC 19977 | MAB_2746c | - | 0.0 | 75.85% (414) | cysteine desulfurase/aminotransferase |
M. marinum M | MMAR_2269 | csd | 0.0 | 87.02% (416) | cysteine desulfurase Csd |
M. avium 104 | MAV_3315 | - | 0.0 | 87.25% (408) | cysteine desulfurase |
M. smegmatis MC2 155 | MSMEG_3125 | - | 0.0 | 83.70% (411) | cysteine desulfurase |
M. thermoresistible (build 8) | TH_3033 | - | 0.0 | 86.27% (415) | PUTATIVE cysteine desulfurases, SufS subfamily |
M. ulcerans Agy99 | MUL_1865 | csd | 0.0 | 86.78% (416) | cysteine desulfurase Csd |
M. vanbaalenii PYR-1 | Mvan_2736 | - | 0.0 | 80.05% (416) | SufS subfamily cysteine desulfurase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3674|M.gilvum_PYR-GCK MTTART-LDLTVLNRVRADFPILSRVMRGGQQLAYLDSGATSQKPLAVLD MSMEG_3125|M.smegmatis_MC2_155 MTAAKT-LDVTAI---RADFPILSRVMRGGNQLAYLDSGATSQKPLQVLD Rv1464|M.tuberculosis_H37Rv MTASVNSLDLAAI---RADFPILKRIMRGGNPLAYLDSGATSQRPLQVLD Mb1499|M.bovis_AF2122/97 MTASVNSLDLAAI---RADFPILKRIMRGGNPLAYLDSGATSQRPLQVLD MLBr_00596|M.leprae_Br4923 MTISLTPLDLSAI---RADFPILKRVMRGGNQLAYLDSGATSQRPVQVLD MAV_3315|M.avium_104 ---------MAAI---RADFPILKRIMRSGNQLAYLDSGATSQRPLQVLD MMAR_2269|M.marinum_M MTVSVARLDLAAI---RADFPILQRVMRSGNQLAYLDSGATSQRPLQVLD MUL_1865|M.ulcerans_Agy99 MTVSVARLDLAAI---RADFPILQRVMRSGNQLAYLDSGATSQRPLQVLD TH_3033|M.thermoresistible__bu MTVAPNRLDLGAI---RADFPILQRVMRGGSQLAYLDSGATAQRPVQVLD Mvan_2736|M.vanbaalenii_PYR-1 MTASVD-LDVAAI---RADFPILKRVMRGGNTLAYLDSGATSQKPLQVLD MAB_2746c|M.abscessus_ATCC_199 MTATVP-LDITAI---RNDFPILSRTVRGGKPLAYLDSGATSQRPVQVLD : .: * *****.* :*.*. *********:*:*: *** Mflv_3674|M.gilvum_PYR-GCK AERDFLLHSNGAVHRGAHQLMEESTDAYEHGREAIASFVGADSDELVFTK MSMEG_3125|M.smegmatis_MC2_155 AEREFLLTSNGAVHRGAHQLMEESTDAYEQGRADIAAFVGADPDELVFTK Rv1464|M.tuberculosis_H37Rv AEREFLTASNGAVHRGAHQLMEEATDAYEQGRADIALFVGADTDELVFTK Mb1499|M.bovis_AF2122/97 AEREFLTASNGAVHRGAHQLMEEATDAYEQGRADIALFVGADTDELVFTK MLBr_00596|M.leprae_Br4923 AEREFLVTSNGAVHRGAHQLMEEATDAYERGRVDIAAFIGAAADELVFTK MAV_3315|M.avium_104 AEREFLLTSNGAVHRGAHQLMEESTDAYEQGRADIAAFVGADPDELVFTK MMAR_2269|M.marinum_M AEREFLTTCNGAVHRGAHQLMEEATDAYEQGRADIAAFVGAEPDELVFTK MUL_1865|M.ulcerans_Agy99 AEREFLTTCNGAVHRGAHQLMEEATDAYEQGRADIAAFVGAEPDELVFTK TH_3033|M.thermoresistible__bu AEREFLTTSYGAVHRGAHQLMEEATDAYEEGRADIAAFVGADPDELVFTK Mvan_2736|M.vanbaalenii_PYR-1 AERQFLTTSYGAVHRGAHQLMEESTDAYEQGRADIAAFVGAAPGELVFTK MAB_2746c|M.abscessus_ATCC_199 AERRFLTERNAAVHRGAHQLAEEATDAYEGARNAIARFVGVDDGEIVFTK *** ** .********* **:***** .* ** *:*. .*:**** Mflv_3674|M.gilvum_PYR-GCK NATEAINLVAYALGDKRFENAIGPG-DVIVTTELEHHANLVPWQELVLRT MSMEG_3125|M.smegmatis_MC2_155 NATEAINLVAYVLGDKRFERAVGPG-DVIVTTEVEHHANLVPWQELAERT Rv1464|M.tuberculosis_H37Rv NATEALNLVSYVLGDSRFERAVGPG-DVIVTTELEHHANLIPWQELARRT Mb1499|M.bovis_AF2122/97 NATEALNLVSYVLGDSRFERAVGPG-DVIVTTELEHHANLIPWQELARRT MLBr_00596|M.leprae_Br4923 NATESLNLVSYVFGDNRFEGTSGDGGDVIVTTELEHHANLIPWQELARRI MAV_3315|M.avium_104 NATEALNLVSYVVGDNRFERAVGPG-DVIVTTELEHHANLVPWQELARRT MMAR_2269|M.marinum_M NATESLNLVSYVLGDSRFDRAIGPG-DVIVTTELEHHANLIPWQELARRT MUL_1865|M.ulcerans_Agy99 NATESLNLVSYVLGDSRFDRAIGPG-DVIVTTELEHHANLIPWQELARRT TH_3033|M.thermoresistible__bu NATEALNLVAYVLGDDRFDRAVGPG-DVIVTTELEHHANLIPWQELARRT Mvan_2736|M.vanbaalenii_PYR-1 NATEALNLVSYVLGDDRSGFAVGPG-DVIVVTEMEHHANLIPWQELARRT MAB_2746c|M.abscessus_ATCC_199 NATESLNLVAYTLGDNRFDRAVGPG-DEIVVTELEHHANLVPWQELCRRT ****::***:*..**.* : * * * **.**:******:***** * Mflv_3674|M.gilvum_PYR-GCK GATLKWYGVTAEGRIDLDSLVLDERVKVVAFSHHSNVTGAIAPVSELVAR MSMEG_3125|M.smegmatis_MC2_155 GATLKWYGVTDSGRIDLDSLELDERVKVVAFSHHSNVTGAVAPVAELVSR Rv1464|M.tuberculosis_H37Rv GATLRWYGVTDDGRIDLDSLYLDDRVKVVAFTHHSNVTGVLTPVSELVSR Mb1499|M.bovis_AF2122/97 GATLRWYGVTDDGRIDLDSLYLDDRVKVVAFTHHSNVTGVLTPVSELVSR MLBr_00596|M.leprae_Br4923 GATLRWYGVTDDGQIDLDSLQLDERVKVVAFSHHSNVTGAVAPVRELVAR MAV_3315|M.avium_104 GASLRWYGVTDDGRIDLDSLQLDERVKVVAFSHHSNVTGAVAPVAELVGR MMAR_2269|M.marinum_M GATLRWYSVTDEGRIDLDSLQLDERVKVVTFTHHSNVTGALAPVAELVSR MUL_1865|M.ulcerans_Agy99 GATLRWYSVTDEGRIDLDSLQLDERVKVVTFTHHSNVTGALAPVAELVSR TH_3033|M.thermoresistible__bu GAELRWYSVTDDGRIDLDSLELDERVKVVAFTHHSNVTGAIAPVEELVSR Mvan_2736|M.vanbaalenii_PYR-1 GATLRWFGLTDDGEVDLDSLKLDERVKVVSFSHHSNVTGVGVPVADMVAR MAB_2746c|M.abscessus_ATCC_199 GATLRWFGVTDDGRIDVDSLELTEAVKVVAFTHQSNVTGAVAPVAELVRR ** *:*:.:* .*.:*:*** * : ****:*:*:*****. .** ::* * Mflv_3674|M.gilvum_PYR-GCK ARAVGALVVLDACQSVPHQPVDFHALDVDFAAFSGHKMLGPTGIGVLYGR MSMEG_3125|M.smegmatis_MC2_155 AKAVGALTVLDACQSAPHQPVDLHALDVDYAAFSGHKMLGPTGIGVLYGR Rv1464|M.tuberculosis_H37Rv AHQSGALTVLDACQSVPHQPVDLHELGVDFAAFSGHKMLGPNGIGVLYGR Mb1499|M.bovis_AF2122/97 AHQSGALTVLDACQSVPHQPVDLHELGVDFAAFSGHKMLGPNGIGVLYGR MLBr_00596|M.leprae_Br4923 AKEVGALTVLDACQSVPHQPVDLHGLGVDFAAFSGHKMLGPNGIGVLYAR MAV_3315|M.avium_104 ARAVGALTVLDACQSVPHQPVDFHALDVDFAAFSGHKMLGPNGIGVLYGR MMAR_2269|M.marinum_M AKAVGALTVLDACQSVPHQPVDFHKLDVDFAAFSGHKMLGPNGIGVLYGR MUL_1865|M.ulcerans_Agy99 AKAVGALTVLDACQSVPHQPVDFHKLDVDFAAFSGHKMLGPNGIGELYGR TH_3033|M.thermoresistible__bu ARAVGALTVLDACQSVPHQPVDLHALGVDYAAWSGHKMLGPNGIGALYGR Mvan_2736|M.vanbaalenii_PYR-1 AKAVGALTVLDSCQAVPHQPVDFHALDVDFAAFSGHKMLGPTGIGALYGR MAB_2746c|M.abscessus_ATCC_199 AKAVGALVVLDACQSVPHMSVNFRELGVDYAAFSGHKMLGPSGVGVLYGR *: ***.***:**:.** .*::: *.**:**:********.*:* **.* Mflv_3674|M.gilvum_PYR-GCK RALLNALPPFLTGGSMIETVTMEATTFAPAPQRFEAGTPMTSQVVGLGAA MSMEG_3125|M.smegmatis_MC2_155 RGLLDAMPPFITGGSMIETVTMEKTTFAPAPQRFEAGTPMTSQVVGLAAA Rv1464|M.tuberculosis_H37Rv RELLAQMPPFLTGGSMIETVTMEGATYAPAPQRFEAGTPMTSQVVGLAAA Mb1499|M.bovis_AF2122/97 RELLAQMPPFLTGGSMIETVTMEGATYAPAPQRFEAGTPMTSQVVGLAAA MLBr_00596|M.leprae_Br4923 RELLSVMPPFLTGGSMIETVTMESTTYAPAPQRFEAGTPMTSQVVGLAAA MAV_3315|M.avium_104 REVLSQLPPFLTGGSMIETVTMESSSYAPVPQRFEAGTPMASQVVGLAAA MMAR_2269|M.marinum_M RELLAAMPPFLTGGSMIETVTMEASTYAPAPQRFEAGTPMTSQVVGLAAA MUL_1865|M.ulcerans_Agy99 RELLAAMPPFLTGGSMIETVTMEASTYAPAPQRFEAGTPMTSQVVGLAAA TH_3033|M.thermoresistible__bu RELLEAMPPFLTGGSMIETVSMEGATYAPAPQRFEAGTPMTSQVVGLAAA Mvan_2736|M.vanbaalenii_PYR-1 ARLLEQLPPFLTGGSMIETVTMEGATYAPPPQRFEAGTQMISQVVGLGAA MAB_2746c|M.abscessus_ATCC_199 RALLEAMPPFITGGSMIETVTMEVSTYAPPPQRFEAGVPMTSQVVGLGAA :* :***:*********:** :::** *******. * ******.** Mflv_3674|M.gilvum_PYR-GCK ARYLDALGMPAVEEHERELVAAALAGLSEVPGVRVIGPASMDDRGSPVSF MSMEG_3125|M.smegmatis_MC2_155 ARYLTALGMPAVEAHEAELVAAALEGLAGVPGVRIIGPTAMENRGSPVSF Rv1464|M.tuberculosis_H37Rv ARYLGAIGMAAVEAHERELVAAAIEGLSGIDGVRILGPTSMRDRGSPVAF Mb1499|M.bovis_AF2122/97 ARYLGAIGMAAVEAHERELVAAAIEGLSGIDGVRILGPTSMRDRGSPVAF MLBr_00596|M.leprae_Br4923 ARYLDAIGMKAVEAHERELVAAAVEGLSRIDGVRIIGPKSMENRGSPVSF MAV_3315|M.avium_104 ARYLGALGMDAVQAHEERLVAAAIEGLSGIDAVRIVGPTSTENRGSPVSF MMAR_2269|M.marinum_M SRYLDAIGMDVIEAHERDLVAAAIEGLSAIEGVRIIGPTSMENRGSPVSF MUL_1865|M.ulcerans_Agy99 SRYLDAIGMDVIEAHERDLVAAAIEGLSAIEGVRIIGPTSMENRGSPVSF TH_3033|M.thermoresistible__bu ARYLSAIGMDAVQAHEAELVAAALEGLSGIEQVRIIGPTSMELRGSPVSF Mvan_2736|M.vanbaalenii_PYR-1 TRYLGGIGMSAVEEHEHRLVTATLEGLAAIPGVRIIGPATAERR-SPVAF MAB_2746c|M.abscessus_ATCC_199 VDYLNAVGMEAVAAHEHQLVSAALAGLAGIEGVRIIGPTDNLDRGGAVSF ** .:** .: ** **:*:: **: : **::** * ..*:* Mflv_3674|M.gilvum_PYR-GCK VVDGVHAHDVGQVLDDDGVAVRVGHHCAWPLHRRFGIAATARASFAVYNT MSMEG_3125|M.smegmatis_MC2_155 VVDGVHAHDVGQVLDDDGVAVRVGHHCAWPLHRRFGIAATARASFAVYNT Rv1464|M.tuberculosis_H37Rv VVEGVHAHDVGQVLDDGGVAVRVGHHCALPLHRRFGLAATARASFAVYNT Mb1499|M.bovis_AF2122/97 VVEGVHAHDVGQVLDDGGVAVRVGHHCALPLHRRFGLAATARASFAVYNT MLBr_00596|M.leprae_Br4923 VVDGVHAHDIGQVLDDDGVAVRVGHHCALPLHRRFALAATARASFAVYNT MAV_3315|M.avium_104 VVDGVHAHDVGQVLDDEGVAVRVGHHCALPLHRRFGLAATARASFAVYNT MMAR_2269|M.marinum_M VVDGVHAHDVGQVLDDEGVAVRVGHHCALPLHRKFGVAATARASFAVYNT MUL_1865|M.ulcerans_Agy99 VVDGVHAHDVGQVLDDEGVAVRVGHHCALPLHRKFGVAATARASFAVYNT TH_3033|M.thermoresistible__bu VVDGVHAHDVGQVLDDDGVAVRVGHHCAWPLHQRFGIAATARASFAVYNT Mvan_2736|M.vanbaalenii_PYR-1 VVDGVHAHDVGQVLDDDGVAVRVGHHCAAPLHRRFGIAATVRASFAVYNT MAB_2746c|M.abscessus_ATCC_199 VVDGIHAHDLGQVLDDEGVAVRVGHHCAWPLHRRFGIAASARASFAVYNT **:*:****:****** *********** ***::*.:**:.********* Mflv_3674|M.gilvum_PYR-GCK VDEVDRLVAGVRRAVEFFGRE MSMEG_3125|M.smegmatis_MC2_155 LDEVDRLVAGVKRAVEFFA-- Rv1464|M.tuberculosis_H37Rv ADEVDRLVAGVRRSRHFFGRA Mb1499|M.bovis_AF2122/97 ADEVDRLVAGVRRSRHFFGRA MLBr_00596|M.leprae_Br4923 VDEVDRLVAGVLRALDFFGRE MAV_3315|M.avium_104 AEEVDRLVAGVRRALDFFGGA MMAR_2269|M.marinum_M RDEVNRLLAGVQRSLNFFGRG MUL_1865|M.ulcerans_Agy99 RDEVNRLLAGVQRSLNFFGRG TH_3033|M.thermoresistible__bu LDEVDRLVAGVRRAVEFFGDR Mvan_2736|M.vanbaalenii_PYR-1 LDEVDRLIAGVQRAIEFFGRD MAB_2746c|M.abscessus_ATCC_199 LDEVDRLTAGVRRAQEFFS-- :**:** *** *: .**.