For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTAAKTLDVTAIRADFPILSRVMRGGNQLAYLDSGATSQKPLQVLDAEREFLLTSNGAVHRGAHQLMEES TDAYEQGRADIAAFVGADPDELVFTKNATEAINLVAYVLGDKRFERAVGPGDVIVTTEVEHHANLVPWQE LAERTGATLKWYGVTDSGRIDLDSLELDERVKVVAFSHHSNVTGAVAPVAELVSRAKAVGALTVLDACQS APHQPVDLHALDVDYAAFSGHKMLGPTGIGVLYGRRGLLDAMPPFITGGSMIETVTMEKTTFAPAPQRFE AGTPMTSQVVGLAAAARYLTALGMPAVEAHEAELVAAALEGLAGVPGVRIIGPTAMENRGSPVSFVVDGV HAHDVGQVLDDDGVAVRVGHHCAWPLHRRFGIAATARASFAVYNTLDEVDRLVAGVKRAVEFFA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_3125 | - | - | 100% (414) | cysteine desulfurase |
| M. smegmatis MC2 155 | MSMEG_4538 | - | 1e-96 | 46.68% (407) | cysteine desulphurase, SufS |
| M. smegmatis MC2 155 | MSMEG_6363 | - | 8e-19 | 24.44% (360) | cysteine desulfurase family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1499 | csd | 0.0 | 83.70% (411) | cysteine desulfurase |
| M. gilvum PYR-GCK | Mflv_3674 | - | 0.0 | 87.02% (416) | SufS subfamily cysteine desulfurase |
| M. tuberculosis H37Rv | Rv1464 | csd | 0.0 | 83.70% (411) | cysteine desulfurase |
| M. leprae Br4923 | MLBr_00596 | - | 0.0 | 84.31% (408) | putative aminotransferase |
| M. abscessus ATCC 19977 | MAB_2746c | - | 0.0 | 78.02% (414) | cysteine desulfurase/aminotransferase |
| M. marinum M | MMAR_2269 | csd | 0.0 | 85.01% (407) | cysteine desulfurase Csd |
| M. avium 104 | MAV_3315 | - | 0.0 | 86.67% (405) | cysteine desulfurase |
| M. thermoresistible (build 8) | TH_3033 | - | 0.0 | 87.35% (411) | PUTATIVE cysteine desulfurases, SufS subfamily |
| M. ulcerans Agy99 | MUL_1865 | csd | 0.0 | 84.77% (407) | cysteine desulfurase Csd |
| M. vanbaalenii PYR-1 | Mvan_2736 | - | 0.0 | 81.36% (413) | SufS subfamily cysteine desulfurase |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_3125|M.smegmatis_MC2_155 MTAAKT-LDVTAI---RADFPILSRVMRGGNQLAYLDSGATSQKPLQVLD
Mflv_3674|M.gilvum_PYR-GCK MTTART-LDLTVLNRVRADFPILSRVMRGGQQLAYLDSGATSQKPLAVLD
MLBr_00596|M.leprae_Br4923 MTISLTPLDLSAI---RADFPILKRVMRGGNQLAYLDSGATSQRPVQVLD
MAV_3315|M.avium_104 ---------MAAI---RADFPILKRIMRSGNQLAYLDSGATSQRPLQVLD
Mb1499|M.bovis_AF2122/97 MTASVNSLDLAAI---RADFPILKRIMRGGNPLAYLDSGATSQRPLQVLD
Rv1464|M.tuberculosis_H37Rv MTASVNSLDLAAI---RADFPILKRIMRGGNPLAYLDSGATSQRPLQVLD
MMAR_2269|M.marinum_M MTVSVARLDLAAI---RADFPILQRVMRSGNQLAYLDSGATSQRPLQVLD
MUL_1865|M.ulcerans_Agy99 MTVSVARLDLAAI---RADFPILQRVMRSGNQLAYLDSGATSQRPLQVLD
TH_3033|M.thermoresistible__bu MTVAPNRLDLGAI---RADFPILQRVMRGGSQLAYLDSGATAQRPVQVLD
Mvan_2736|M.vanbaalenii_PYR-1 MTASVD-LDVAAI---RADFPILKRVMRGGNTLAYLDSGATSQKPLQVLD
MAB_2746c|M.abscessus_ATCC_199 MTATVP-LDITAI---RNDFPILSRTVRGGKPLAYLDSGATSQRPVQVLD
: .: * *****.* :*.*. *********:*:*: ***
MSMEG_3125|M.smegmatis_MC2_155 AEREFLLTSNGAVHRGAHQLMEESTDAYEQGRADIAAFVGADPDELVFTK
Mflv_3674|M.gilvum_PYR-GCK AERDFLLHSNGAVHRGAHQLMEESTDAYEHGREAIASFVGADSDELVFTK
MLBr_00596|M.leprae_Br4923 AEREFLVTSNGAVHRGAHQLMEEATDAYERGRVDIAAFIGAAADELVFTK
MAV_3315|M.avium_104 AEREFLLTSNGAVHRGAHQLMEESTDAYEQGRADIAAFVGADPDELVFTK
Mb1499|M.bovis_AF2122/97 AEREFLTASNGAVHRGAHQLMEEATDAYEQGRADIALFVGADTDELVFTK
Rv1464|M.tuberculosis_H37Rv AEREFLTASNGAVHRGAHQLMEEATDAYEQGRADIALFVGADTDELVFTK
MMAR_2269|M.marinum_M AEREFLTTCNGAVHRGAHQLMEEATDAYEQGRADIAAFVGAEPDELVFTK
MUL_1865|M.ulcerans_Agy99 AEREFLTTCNGAVHRGAHQLMEEATDAYEQGRADIAAFVGAEPDELVFTK
TH_3033|M.thermoresistible__bu AEREFLTTSYGAVHRGAHQLMEEATDAYEEGRADIAAFVGADPDELVFTK
Mvan_2736|M.vanbaalenii_PYR-1 AERQFLTTSYGAVHRGAHQLMEESTDAYEQGRADIAAFVGAAPGELVFTK
MAB_2746c|M.abscessus_ATCC_199 AERRFLTERNAAVHRGAHQLAEEATDAYEGARNAIARFVGVDDGEIVFTK
*** ** .********* **:***** .* ** *:*. .*:****
MSMEG_3125|M.smegmatis_MC2_155 NATEAINLVAYVLGDKRFERAVGPG-DVIVTTEVEHHANLVPWQELAERT
Mflv_3674|M.gilvum_PYR-GCK NATEAINLVAYALGDKRFENAIGPG-DVIVTTELEHHANLVPWQELVLRT
MLBr_00596|M.leprae_Br4923 NATESLNLVSYVFGDNRFEGTSGDGGDVIVTTELEHHANLIPWQELARRI
MAV_3315|M.avium_104 NATEALNLVSYVVGDNRFERAVGPG-DVIVTTELEHHANLVPWQELARRT
Mb1499|M.bovis_AF2122/97 NATEALNLVSYVLGDSRFERAVGPG-DVIVTTELEHHANLIPWQELARRT
Rv1464|M.tuberculosis_H37Rv NATEALNLVSYVLGDSRFERAVGPG-DVIVTTELEHHANLIPWQELARRT
MMAR_2269|M.marinum_M NATESLNLVSYVLGDSRFDRAIGPG-DVIVTTELEHHANLIPWQELARRT
MUL_1865|M.ulcerans_Agy99 NATESLNLVSYVLGDSRFDRAIGPG-DVIVTTELEHHANLIPWQELARRT
TH_3033|M.thermoresistible__bu NATEALNLVAYVLGDDRFDRAVGPG-DVIVTTELEHHANLIPWQELARRT
Mvan_2736|M.vanbaalenii_PYR-1 NATEALNLVSYVLGDDRSGFAVGPG-DVIVVTEMEHHANLIPWQELARRT
MAB_2746c|M.abscessus_ATCC_199 NATESLNLVAYTLGDNRFDRAVGPG-DEIVVTELEHHANLVPWQELCRRT
****::***:*..**.* : * * * **.**:******:***** *
MSMEG_3125|M.smegmatis_MC2_155 GATLKWYGVTDSGRIDLDSLELDERVKVVAFSHHSNVTGAVAPVAELVSR
Mflv_3674|M.gilvum_PYR-GCK GATLKWYGVTAEGRIDLDSLVLDERVKVVAFSHHSNVTGAIAPVSELVAR
MLBr_00596|M.leprae_Br4923 GATLRWYGVTDDGQIDLDSLQLDERVKVVAFSHHSNVTGAVAPVRELVAR
MAV_3315|M.avium_104 GASLRWYGVTDDGRIDLDSLQLDERVKVVAFSHHSNVTGAVAPVAELVGR
Mb1499|M.bovis_AF2122/97 GATLRWYGVTDDGRIDLDSLYLDDRVKVVAFTHHSNVTGVLTPVSELVSR
Rv1464|M.tuberculosis_H37Rv GATLRWYGVTDDGRIDLDSLYLDDRVKVVAFTHHSNVTGVLTPVSELVSR
MMAR_2269|M.marinum_M GATLRWYSVTDEGRIDLDSLQLDERVKVVTFTHHSNVTGALAPVAELVSR
MUL_1865|M.ulcerans_Agy99 GATLRWYSVTDEGRIDLDSLQLDERVKVVTFTHHSNVTGALAPVAELVSR
TH_3033|M.thermoresistible__bu GAELRWYSVTDDGRIDLDSLELDERVKVVAFTHHSNVTGAIAPVEELVSR
Mvan_2736|M.vanbaalenii_PYR-1 GATLRWFGLTDDGEVDLDSLKLDERVKVVSFSHHSNVTGVGVPVADMVAR
MAB_2746c|M.abscessus_ATCC_199 GATLRWFGVTDDGRIDVDSLELTEAVKVVAFTHQSNVTGAVAPVAELVRR
** *:*:.:* .*.:*:*** * : ****:*:*:*****. .** ::* *
MSMEG_3125|M.smegmatis_MC2_155 AKAVGALTVLDACQSAPHQPVDLHALDVDYAAFSGHKMLGPTGIGVLYGR
Mflv_3674|M.gilvum_PYR-GCK ARAVGALVVLDACQSVPHQPVDFHALDVDFAAFSGHKMLGPTGIGVLYGR
MLBr_00596|M.leprae_Br4923 AKEVGALTVLDACQSVPHQPVDLHGLGVDFAAFSGHKMLGPNGIGVLYAR
MAV_3315|M.avium_104 ARAVGALTVLDACQSVPHQPVDFHALDVDFAAFSGHKMLGPNGIGVLYGR
Mb1499|M.bovis_AF2122/97 AHQSGALTVLDACQSVPHQPVDLHELGVDFAAFSGHKMLGPNGIGVLYGR
Rv1464|M.tuberculosis_H37Rv AHQSGALTVLDACQSVPHQPVDLHELGVDFAAFSGHKMLGPNGIGVLYGR
MMAR_2269|M.marinum_M AKAVGALTVLDACQSVPHQPVDFHKLDVDFAAFSGHKMLGPNGIGVLYGR
MUL_1865|M.ulcerans_Agy99 AKAVGALTVLDACQSVPHQPVDFHKLDVDFAAFSGHKMLGPNGIGELYGR
TH_3033|M.thermoresistible__bu ARAVGALTVLDACQSVPHQPVDLHALGVDYAAWSGHKMLGPNGIGALYGR
Mvan_2736|M.vanbaalenii_PYR-1 AKAVGALTVLDSCQAVPHQPVDFHALDVDFAAFSGHKMLGPTGIGALYGR
MAB_2746c|M.abscessus_ATCC_199 AKAVGALVVLDACQSVPHMSVNFRELGVDYAAFSGHKMLGPSGVGVLYGR
*: ***.***:**:.** .*::: *.**:**:********.*:* **.*
MSMEG_3125|M.smegmatis_MC2_155 RGLLDAMPPFITGGSMIETVTMEKTTFAPAPQRFEAGTPMTSQVVGLAAA
Mflv_3674|M.gilvum_PYR-GCK RALLNALPPFLTGGSMIETVTMEATTFAPAPQRFEAGTPMTSQVVGLGAA
MLBr_00596|M.leprae_Br4923 RELLSVMPPFLTGGSMIETVTMESTTYAPAPQRFEAGTPMTSQVVGLAAA
MAV_3315|M.avium_104 REVLSQLPPFLTGGSMIETVTMESSSYAPVPQRFEAGTPMASQVVGLAAA
Mb1499|M.bovis_AF2122/97 RELLAQMPPFLTGGSMIETVTMEGATYAPAPQRFEAGTPMTSQVVGLAAA
Rv1464|M.tuberculosis_H37Rv RELLAQMPPFLTGGSMIETVTMEGATYAPAPQRFEAGTPMTSQVVGLAAA
MMAR_2269|M.marinum_M RELLAAMPPFLTGGSMIETVTMEASTYAPAPQRFEAGTPMTSQVVGLAAA
MUL_1865|M.ulcerans_Agy99 RELLAAMPPFLTGGSMIETVTMEASTYAPAPQRFEAGTPMTSQVVGLAAA
TH_3033|M.thermoresistible__bu RELLEAMPPFLTGGSMIETVSMEGATYAPAPQRFEAGTPMTSQVVGLAAA
Mvan_2736|M.vanbaalenii_PYR-1 ARLLEQLPPFLTGGSMIETVTMEGATYAPPPQRFEAGTQMISQVVGLGAA
MAB_2746c|M.abscessus_ATCC_199 RALLEAMPPFITGGSMIETVTMEVSTYAPPPQRFEAGVPMTSQVVGLGAA
:* :***:*********:** :::** *******. * ******.**
MSMEG_3125|M.smegmatis_MC2_155 ARYLTALGMPAVEAHEAELVAAALEGLAGVPGVRIIGPTAMENRGSPVSF
Mflv_3674|M.gilvum_PYR-GCK ARYLDALGMPAVEEHERELVAAALAGLSEVPGVRVIGPASMDDRGSPVSF
MLBr_00596|M.leprae_Br4923 ARYLDAIGMKAVEAHERELVAAAVEGLSRIDGVRIIGPKSMENRGSPVSF
MAV_3315|M.avium_104 ARYLGALGMDAVQAHEERLVAAAIEGLSGIDAVRIVGPTSTENRGSPVSF
Mb1499|M.bovis_AF2122/97 ARYLGAIGMAAVEAHERELVAAAIEGLSGIDGVRILGPTSMRDRGSPVAF
Rv1464|M.tuberculosis_H37Rv ARYLGAIGMAAVEAHERELVAAAIEGLSGIDGVRILGPTSMRDRGSPVAF
MMAR_2269|M.marinum_M SRYLDAIGMDVIEAHERDLVAAAIEGLSAIEGVRIIGPTSMENRGSPVSF
MUL_1865|M.ulcerans_Agy99 SRYLDAIGMDVIEAHERDLVAAAIEGLSAIEGVRIIGPTSMENRGSPVSF
TH_3033|M.thermoresistible__bu ARYLSAIGMDAVQAHEAELVAAALEGLSGIEQVRIIGPTSMELRGSPVSF
Mvan_2736|M.vanbaalenii_PYR-1 TRYLGGIGMSAVEEHEHRLVTATLEGLAAIPGVRIIGPATAERR-SPVAF
MAB_2746c|M.abscessus_ATCC_199 VDYLNAVGMEAVAAHEHQLVSAALAGLAGIEGVRIIGPTDNLDRGGAVSF
** .:** .: ** **:*:: **: : **::** * ..*:*
MSMEG_3125|M.smegmatis_MC2_155 VVDGVHAHDVGQVLDDDGVAVRVGHHCAWPLHRRFGIAATARASFAVYNT
Mflv_3674|M.gilvum_PYR-GCK VVDGVHAHDVGQVLDDDGVAVRVGHHCAWPLHRRFGIAATARASFAVYNT
MLBr_00596|M.leprae_Br4923 VVDGVHAHDIGQVLDDDGVAVRVGHHCALPLHRRFALAATARASFAVYNT
MAV_3315|M.avium_104 VVDGVHAHDVGQVLDDEGVAVRVGHHCALPLHRRFGLAATARASFAVYNT
Mb1499|M.bovis_AF2122/97 VVEGVHAHDVGQVLDDGGVAVRVGHHCALPLHRRFGLAATARASFAVYNT
Rv1464|M.tuberculosis_H37Rv VVEGVHAHDVGQVLDDGGVAVRVGHHCALPLHRRFGLAATARASFAVYNT
MMAR_2269|M.marinum_M VVDGVHAHDVGQVLDDEGVAVRVGHHCALPLHRKFGVAATARASFAVYNT
MUL_1865|M.ulcerans_Agy99 VVDGVHAHDVGQVLDDEGVAVRVGHHCALPLHRKFGVAATARASFAVYNT
TH_3033|M.thermoresistible__bu VVDGVHAHDVGQVLDDDGVAVRVGHHCAWPLHQRFGIAATARASFAVYNT
Mvan_2736|M.vanbaalenii_PYR-1 VVDGVHAHDVGQVLDDDGVAVRVGHHCAAPLHRRFGIAATVRASFAVYNT
MAB_2746c|M.abscessus_ATCC_199 VVDGIHAHDLGQVLDDEGVAVRVGHHCAWPLHRRFGIAASARASFAVYNT
**:*:****:****** *********** ***::*.:**:.*********
MSMEG_3125|M.smegmatis_MC2_155 LDEVDRLVAGVKRAVEFFA--
Mflv_3674|M.gilvum_PYR-GCK VDEVDRLVAGVRRAVEFFGRE
MLBr_00596|M.leprae_Br4923 VDEVDRLVAGVLRALDFFGRE
MAV_3315|M.avium_104 AEEVDRLVAGVRRALDFFGGA
Mb1499|M.bovis_AF2122/97 ADEVDRLVAGVRRSRHFFGRA
Rv1464|M.tuberculosis_H37Rv ADEVDRLVAGVRRSRHFFGRA
MMAR_2269|M.marinum_M RDEVNRLLAGVQRSLNFFGRG
MUL_1865|M.ulcerans_Agy99 RDEVNRLLAGVQRSLNFFGRG
TH_3033|M.thermoresistible__bu LDEVDRLVAGVRRAVEFFGDR
Mvan_2736|M.vanbaalenii_PYR-1 LDEVDRLIAGVQRAIEFFGRD
MAB_2746c|M.abscessus_ATCC_199 LDEVDRLTAGVRRAQEFFS--
:**:** *** *: .**.