For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPSDTSPNGLSRREELLAVATKLFAARGYHGTRMDDVADVIGLNKATVYHYYASKSLILFDIYRQAAEGT LAAVHDDPSWTAREALYQYTVRLLTAIASNPERAAVYFQEQPYITEWFTSEQVAEVREKEQQVYEHVHGL IDRGIASGEFYECDSHVVALGYIGMTLGSYRWLRPSGRRTAKEIAAEFSTALLRGLIRDESIRNQSPLGT RKET
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0158 | - | - | 100% (214) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY TETR-FAMILY) |
M. tuberculosis H37Rv | Rv3557c | - | 1e-13 | 26.04% (192) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv3208 | - | 3e-12 | 26.97% (178) | TetR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0163 | - | 1e-122 | 100.00% (214) | TetR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_0719 | - | 4e-88 | 78.00% (200) | TetR family transcriptional regulator |
M. leprae Br4923 | MLBr_00815 | - | 3e-09 | 25.28% (178) | putative TetR-family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_4574c | - | 7e-81 | 68.10% (210) | TetR family transcriptional regulator |
M. marinum M | MMAR_0381 | - | 1e-108 | 91.90% (210) | TetR family transcriptional regulator |
M. avium 104 | MAV_5138 | - | 1e-105 | 89.52% (210) | transcriptional regulator, TetR family protein |
M. smegmatis MC2 155 | MSMEG_0120 | - | 2e-87 | 75.74% (202) | transcriptional regulatory protein |
M. thermoresistible (build 8) | TH_0160 | - | 2e-90 | 79.10% (201) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY |
M. ulcerans Agy99 | MUL_4731 | - | 1e-108 | 91.90% (210) | TetR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_0126 | - | 1e-92 | 78.26% (207) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0719|M.gilvum_PYR-GCK -------------------------------------MSRREELLAVATK Mvan_0126|M.vanbaalenii_PYR-1 ---------------------------MSESTT--NGMSRREELLAVATK MSMEG_0120|M.smegmatis_MC2_155 ---------------------------MTSAAN--NGTSRREELLNVAAK TH_0160|M.thermoresistible__bu -------------------------------------MTRREELLAVATR Rv0158|M.tuberculosis_H37Rv ---------------------------MPSDTS-PNGLSRREELLAVATK Mb0163|M.bovis_AF2122/97 ---------------------------MPSDTS-PNGLSRREELLAVATK MMAR_0381|M.marinum_M ---------------------------MPSET----GLSRREELLAVATK MUL_4731|M.ulcerans_Agy99 ---------------------------MPSET----GLSRREELLAVATK MAV_5138|M.avium_104 ---------------------------MPADSSTPNGQTRREELLAVATK MAB_4574c|M.abscessus_ATCC_199 --------------------MQPVPEASKAGSSSQRRAGRREELVAVASK MLBr_00815|M.leprae_Br4923 MNNLAKAAQRRTVRPIDRGRLSDDIATPNQRSNRLSRDKRRGQLLIVASD ** :*: **: Mflv_0719|M.gilvum_PYR-GCK LFAARGYHGTRMDDVADAVGLNKATVYHYYASKSLILYDIYKGAADFTVD Mvan_0126|M.vanbaalenii_PYR-1 LFAARGYHGTRMDDVADAVGLNKATVYHYYASKSLILYDIYKGAADFTVD MSMEG_0120|M.smegmatis_MC2_155 LFAARGYHGTRMDDVAEAVGLNKATVYHYYASKSLILYDIYKSAADFTVE TH_0160|M.thermoresistible__bu LFAARGYHGTRMDDVADAIGLNKATVYHYYASKSLILYDIYRRAADSTVA Rv0158|M.tuberculosis_H37Rv LFAARGYHGTRMDDVADVIGLNKATVYHYYASKSLILFDIYRQAAEGTLA Mb0163|M.bovis_AF2122/97 LFAARGYHGTRMDDVADVIGLNKATVYHYYASKSLILFDIYRQAAEGTLA MMAR_0381|M.marinum_M LFAARGYHGTRMDDVADVIGLNKATVYHYYASKSLILFDIYRQAAEGTLG MUL_4731|M.ulcerans_Agy99 LFAARGYHGTRMDDVADVIGLNKATVYHYYASKSLILFDIYRQAAEGTLG MAV_5138|M.avium_104 LFAARGYHGTRMDDVADVIGLNKATVYHYYASKSLILYDIYQQAAERTLA MAB_4574c|M.abscessus_ATCC_199 LFAARGYHGTRMDDIADVAGLNKATVYHYFASKALILYEIYFKAAEETLA MLBr_00815|M.leprae_Br4923 VFVDHGYHAAGMDEIADRAGVSKPVLYQHFSSKLELYLAVLERHMNNLVS :*. :***.: **::*: *:.*..:*::::** : : : : Mflv_0719|M.gilvum_PYR-GCK ALHDDP--TASARETIYHFTRRLLVGIASDIERAAVYFQEGPYISEWFTE Mvan_0126|M.vanbaalenii_PYR-1 ALHDDP--TATARETIYHFTRRLLVGIANDIERAAVYFQEGPYITEWFTE MSMEG_0120|M.smegmatis_MC2_155 ALHDDP--TSSARETIYHFTRRLMVGIANDLERAAVYFQEGPYIAEWFTE TH_0160|M.thermoresistible__bu ALHDDP--NASAREMIYEFTRRLLVGIAGDIERAAVYFQEAPYITEWFTE Rv0158|M.tuberculosis_H37Rv AVHDDP--SWTAREALYQYTVRLLTAIASNPERAAVYFQEQPYITEWFTS Mb0163|M.bovis_AF2122/97 AVHDDP--SWTAREALYQYTVRLLTAIASNPERAAVYFQEQPYITEWFTS MMAR_0381|M.marinum_M ALHAEP--SWTAREALYQYTVRLLTGIADNPERAAVYFQEQPYIAEWFTP MUL_4731|M.ulcerans_Agy99 ALHAEP--SWTAREALYQYTVRLLTGIADNPERAAVYFQEQPYIAEWFTP MAV_5138|M.avium_104 AVHDDP--SMTAREALYQYTVRLLDQIAANPEGAAVYFQEQPYITEWFTK MAB_4574c|M.abscessus_ATCC_199 CLQDDP--RWSARESLYQCTSRMLALIFSNREQGAVYFQENPFLSEWLSP MLBr_00815|M.leprae_Br4923 SVQQALRTTTNNRQRLHAAVQAFFDFIEHDGQGYRLIFEND----NITEP .:: . *: :: . :: * : : : *:: : Mflv_0719|M.gilvum_PYR-GCK EQVDYIREKEAQVYEHVRDVIDRGIASGEFNDCDSHVLALGYIGMTLGSY Mvan_0126|M.vanbaalenii_PYR-1 EQVEYIREKETQVYEHVRDVIDRGIASGEFYDCDSHVLALGYIGMTLGSY MSMEG_0120|M.smegmatis_MC2_155 EQVEYIRHSEAQVYEHVRDVIDRGIASGEFYDCDSHVLALGYIGMVLGAY TH_0160|M.thermoresistible__bu EQVAYIRESEAKVYEHVRDVIDRGIASGEFYECDSHVLALGYIGMTLGSY Rv0158|M.tuberculosis_H37Rv EQVAEVREKEQQVYEHVHGLIDRGIASGEFYECDSHVVALGYIGMTLGSY Mb0163|M.bovis_AF2122/97 EQVAEVREKEQQVYEHVHGLIDRGIASGEFYECDSHVVALGYIGMTLGSY MMAR_0381|M.marinum_M EQVAEVREKEAQVHEHVHGLIDRGIASGEFYECDSHVVALGYIGMTLGSY MUL_4731|M.ulcerans_Agy99 EQVAEVREKEAQVHEHVHGLIDRGIASGEFYECDSHVVALGYIGMTLGSY MAV_5138|M.avium_104 EQVAAVREKETQVYEHVHGLIDRGIASGEFYECDSHVLALGYIGMTLGAY MAB_4574c|M.abscessus_ATCC_199 EQVAEIRTREDMVQERVQNIIERGIASGEFVECDSHVMALGYIGMVLGSY MLBr_00815|M.leprae_Br4923 RVAAQVRVATESCIDAVFALIS---ADSRLDPHRARMVAVGLVGISVDCA . . :* : * :*. *...: ::::*:* :*: :.. Mflv_0719|M.gilvum_PYR-GCK RWLRPHGRRTAQEIAVEFSSALLRGLIRDETVRATSPLGVGIDVTAKQ-- Mvan_0126|M.vanbaalenii_PYR-1 RWLRPHGRRTAQEIAVEFSTALLRGLIRDETVRTLSPLGVGIDAPVKTRI MSMEG_0120|M.smegmatis_MC2_155 RWLRPHGRRTAKEIAVEFSTALLRGLIRDENIRVESPLGIDVQAGSEEQR TH_0160|M.thermoresistible__bu RWLRPDGRRTAEEIAEEFSTALLRGLIRDEKIRADFPHGTGESEAEPANP Rv0158|M.tuberculosis_H37Rv RWLRPSGRRTAKEIAAEFSTALLRGLIRDESIRNQSPLGTRKET------ Mb0163|M.bovis_AF2122/97 RWLRPSGRRTAKEIAAEFSTALLRGLIRDESIRNQSPLGTRKET------ MMAR_0381|M.marinum_M RWLRPHGRRTAREIAAEFSTALLRGLIRDESIRNQSPLGS---------- MUL_4731|M.ulcerans_Agy99 RWLRPHGRRTAREIAAEFSTALLRGLIRDESIRNQSPLGS---------- MAV_5138|M.avium_104 RWLRPSGRRSAKEIAAEFSTALLRGLIRDEEIRTTSPLGP---------- MAB_4574c|M.abscessus_ATCC_199 RWLNPSGRRSAQEIAVEFSTTLLRGLIRDEATRINDPLGVASATSLDGAR MLBr_00815|M.leprae_Br4923 RYWLDTNRPISKSDAVEGTVQFAWGGLSHVPLTRL--------------- *: .* :.. * * : : * : . Mflv_0719|M.gilvum_PYR-GCK ----- Mvan_0126|M.vanbaalenii_PYR-1 LEEPS MSMEG_0120|M.smegmatis_MC2_155 ----- TH_0160|M.thermoresistible__bu AG--- Rv0158|M.tuberculosis_H37Rv ----- Mb0163|M.bovis_AF2122/97 ----- MMAR_0381|M.marinum_M ----- MUL_4731|M.ulcerans_Agy99 ----- MAV_5138|M.avium_104 ----- MAB_4574c|M.abscessus_ATCC_199 ----- MLBr_00815|M.leprae_Br4923 -----