For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SRREELLAVATKLFAARGYHGTRMDDVADAVGLNKATVYHYYASKSLILYDIYKGAADFTVDALHDDPTA SARETIYHFTRRLLVGIASDIERAAVYFQEGPYISEWFTEEQVDYIREKEAQVYEHVRDVIDRGIASGEF NDCDSHVLALGYIGMTLGSYRWLRPHGRRTAQEIAVEFSSALLRGLIRDETVRATSPLGVGIDVTAKQ*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_0719 | - | - | 100% (209) | TetR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_1483 | - | 5e-14 | 25.79% (190) | TetR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_0013 | - | 7e-10 | 47.27% (55) | TetR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0163 | - | 3e-88 | 78.00% (200) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0158 | - | 3e-88 | 78.00% (200) | TetR family transcriptional regulator |
M. leprae Br4923 | MLBr_00717 | - | 5e-08 | 34.78% (69) | putative TetR-family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_4574c | - | 3e-75 | 68.34% (199) | TetR family transcriptional regulator |
M. marinum M | MMAR_0381 | - | 2e-88 | 78.00% (200) | TetR family transcriptional regulator |
M. avium 104 | MAV_5138 | - | 6e-87 | 77.39% (199) | transcriptional regulator, TetR family protein |
M. smegmatis MC2 155 | MSMEG_0120 | - | 1e-103 | 85.10% (208) | transcriptional regulatory protein |
M. thermoresistible (build 8) | TH_0160 | - | 9e-98 | 86.14% (202) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (POSSIBLY |
M. ulcerans Agy99 | MUL_4731 | - | 2e-88 | 78.00% (200) | TetR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_0126 | - | 1e-112 | 94.23% (208) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0719|M.gilvum_PYR-GCK -----------------MSRREELLAVATKLFAARGYHGTRMDDVADAVG Mvan_0126|M.vanbaalenii_PYR-1 -------MSESTT--NGMSRREELLAVATKLFAARGYHGTRMDDVADAVG MSMEG_0120|M.smegmatis_MC2_155 -------MTSAAN--NGTSRREELLNVAAKLFAARGYHGTRMDDVAEAVG TH_0160|M.thermoresistible__bu -----------------MTRREELLAVATRLFAARGYHGTRMDDVADAIG Mb0163|M.bovis_AF2122/97 -------MPSDTS-PNGLSRREELLAVATKLFAARGYHGTRMDDVADVIG Rv0158|M.tuberculosis_H37Rv -------MPSDTS-PNGLSRREELLAVATKLFAARGYHGTRMDDVADVIG MMAR_0381|M.marinum_M -------MPSET----GLSRREELLAVATKLFAARGYHGTRMDDVADVIG MUL_4731|M.ulcerans_Agy99 -------MPSET----GLSRREELLAVATKLFAARGYHGTRMDDVADVIG MAV_5138|M.avium_104 -------MPADSSTPNGQTRREELLAVATKLFAARGYHGTRMDDVADVIG MAB_4574c|M.abscessus_ATCC_199 MQPVPEASKAGSSSQRRAGRREELVAVASKLFAARGYHGTRMDDIADVAG MLBr_00717|M.leprae_Br4923 -------MTTARRRLSPEDRRAELLALGAEVFGKRPYDEVRIDEIAERAG ** **: :.:.:*. * *. .*:*::*: * Mflv_0719|M.gilvum_PYR-GCK LNKATVYHYYASKSLILYDIYKGAADFTVDALHDDP--TASARETIYHFT Mvan_0126|M.vanbaalenii_PYR-1 LNKATVYHYYASKSLILYDIYKGAADFTVDALHDDP--TATARETIYHFT MSMEG_0120|M.smegmatis_MC2_155 LNKATVYHYYASKSLILYDIYKSAADFTVEALHDDP--TSSARETIYHFT TH_0160|M.thermoresistible__bu LNKATVYHYYASKSLILYDIYRRAADSTVAALHDDP--NASAREMIYEFT Mb0163|M.bovis_AF2122/97 LNKATVYHYYASKSLILFDIYRQAAEGTLAAVHDDP--SWTAREALYQYT Rv0158|M.tuberculosis_H37Rv LNKATVYHYYASKSLILFDIYRQAAEGTLAAVHDDP--SWTAREALYQYT MMAR_0381|M.marinum_M LNKATVYHYYASKSLILFDIYRQAAEGTLGALHAEP--SWTAREALYQYT MUL_4731|M.ulcerans_Agy99 LNKATVYHYYASKSLILFDIYRQAAEGTLGALHAEP--SWTAREALYQYT MAV_5138|M.avium_104 LNKATVYHYYASKSLILYDIYQQAAERTLAAVHDDP--SMTAREALYQYT MAB_4574c|M.abscessus_ATCC_199 LNKATVYHYFASKALILYEIYFKAAEETLACLQDDP--RWSARESLYQCT MLBr_00717|M.leprae_Br4923 VSRALMYHYFPDKRAFFAAVVKDEADRLYAATNIPPPAGLTMFEEVRVGV :.:* :***:..* :: : *: . : * : * : . Mflv_0719|M.gilvum_PYR-GCK RRLLVGIASDIERAAVYFQEGPYISEWFTEEQVDYIREKEAQVYEHVRDV Mvan_0126|M.vanbaalenii_PYR-1 RRLLVGIANDIERAAVYFQEGPYITEWFTEEQVEYIREKETQVYEHVRDV MSMEG_0120|M.smegmatis_MC2_155 RRLMVGIANDLERAAVYFQEGPYIAEWFTEEQVEYIRHSEAQVYEHVRDV TH_0160|M.thermoresistible__bu RRLLVGIAGDIERAAVYFQEAPYITEWFTEEQVAYIRESEAKVYEHVRDV Mb0163|M.bovis_AF2122/97 VRLLTAIASNPERAAVYFQEQPYITEWFTSEQVAEVREKEQQVYEHVHGL Rv0158|M.tuberculosis_H37Rv VRLLTAIASNPERAAVYFQEQPYITEWFTSEQVAEVREKEQQVYEHVHGL MMAR_0381|M.marinum_M VRLLTGIADNPERAAVYFQEQPYIAEWFTPEQVAEVREKEAQVHEHVHGL MUL_4731|M.ulcerans_Agy99 VRLLTGIADNPERAAVYFQEQPYIAEWFTPEQVAEVREKEAQVHEHVHGL MAV_5138|M.avium_104 VRLLDQIAANPEGAAVYFQEQPYITEWFTKEQVAAVREKETQVYEHVHGL MAB_4574c|M.abscessus_ATCC_199 SRMLALIFSNREQGAVYFQENPFLSEWLSPEQVAEIRTREDMVQERVQNI MLBr_00717|M.leprae_Br4923 LAYMAYHKQNPEAAWAAYVGLGRSDPVLLGIDDEAKNRQMEHIMSRIGDV : : * . . : : : . : .:: .: Mflv_0719|M.gilvum_PYR-GCK IDRGIAS--GEFNDCDSHVLALGYIGMTLGSYRWLRPHGRRTAQEIAVEF Mvan_0126|M.vanbaalenii_PYR-1 IDRGIAS--GEFYDCDSHVLALGYIGMTLGSYRWLRPHGRRTAQEIAVEF MSMEG_0120|M.smegmatis_MC2_155 IDRGIAS--GEFYDCDSHVLALGYIGMVLGAYRWLRPHGRRTAKEIAVEF TH_0160|M.thermoresistible__bu IDRGIAS--GEFYECDSHVLALGYIGMTLGSYRWLRPDGRRTAEEIAEEF Mb0163|M.bovis_AF2122/97 IDRGIAS--GEFYECDSHVVALGYIGMTLGSYRWLRPSGRRTAKEIAAEF Rv0158|M.tuberculosis_H37Rv IDRGIAS--GEFYECDSHVVALGYIGMTLGSYRWLRPSGRRTAKEIAAEF MMAR_0381|M.marinum_M IDRGIAS--GEFYECDSHVVALGYIGMTLGSYRWLRPHGRRTAREIAAEF MUL_4731|M.ulcerans_Agy99 IDRGIAS--GEFYECDSHVVALGYIGMTLGSYRWLRPHGRRTAREIAAEF MAV_5138|M.avium_104 IDRGIAS--GEFYECDSHVLALGYIGMTLGAYRWLRPSGRRSAKEIAAEF MAB_4574c|M.abscessus_ATCC_199 IERGIAS--GEFVECDSHVMALGYIGMVLGSYRWLNPSGRRSAQEIAVEF MLBr_00717|M.leprae_Br4923 VSVVPESKLHPDIERDLRVIVHGWLAFTFEVCRQRIMDPSTDADRLADSC :. * : * :*:. *::.:.: * * .:* . Mflv_0719|M.gilvum_PYR-GCK SSALLRGLIRDETVRATSPLGVGIDVTAKQ------- Mvan_0126|M.vanbaalenii_PYR-1 STALLRGLIRDETVRTLSPLGVGIDAPVKTRILEEPS MSMEG_0120|M.smegmatis_MC2_155 STALLRGLIRDENIRVESPLGIDVQAGSEEQR----- TH_0160|M.thermoresistible__bu STALLRGLIRDEKIRADFPHGTGESEAEPANPAG--- Mb0163|M.bovis_AF2122/97 STALLRGLIRDESIRNQSPLGTRKET----------- Rv0158|M.tuberculosis_H37Rv STALLRGLIRDESIRNQSPLGTRKET----------- MMAR_0381|M.marinum_M STALLRGLIRDESIRNQSPLGS--------------- MUL_4731|M.ulcerans_Agy99 STALLRGLIRDESIRNQSPLGS--------------- MAV_5138|M.avium_104 STALLRGLIRDEEIRTTSPLGP--------------- MAB_4574c|M.abscessus_ATCC_199 STTLLRGLIRDEATRINDPLGVASATSLDGAR----- MLBr_00717|M.leprae_Br4923 AHALLDAIARVPEISKELADAMAIARQPPQ------- : :** .: * . .