For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
QLLLVRHALPLRSEPGQGSDPSLSAEGLEQAKRLPDALARFPITRLVSSPQVRAIETGQPVADALGLPIE VDDRLAEYDRDLAHYIPIEQIAAERPEELQRLIDGHLPSAVDEAAFLARVTAGIEDLVTGAGHDDTVAVF SHGGVINVLLHHVLRTERLLSFHVDYASVTRLLSSRTGRLAVAGVNGTEHVWDLLPRNQRW*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5604 | - | - | 100% (202) | phosphoglycerate mutase |
M. vanbaalenii PYR-1 | Mvan_3618 | - | 9e-10 | 31.22% (205) | bifunctional RNase H/acid phosphatase |
M. vanbaalenii PYR-1 | Mvan_3482 | - | 8e-09 | 29.10% (189) | phosphoglycerate mutase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2253c | - | 9e-09 | 33.33% (201) | bifunctional RNase H/acid phosphatase |
M. gilvum PYR-GCK | Mflv_1203 | - | 1e-94 | 85.22% (203) | phosphoglycerate mutase |
M. tuberculosis H37Rv | Rv2228c | - | 1e-08 | 33.33% (201) | bifunctional RNase H/acid phosphatase |
M. leprae Br4923 | MLBr_01298 | - | 2e-07 | 29.86% (144) | hypothetical protein MLBr_01298 |
M. abscessus ATCC 19977 | MAB_1905 | - | 4e-09 | 32.34% (201) | bifunctional RNase H/acid phosphatase |
M. marinum M | MMAR_5305 | - | 3e-78 | 69.31% (202) | hypothetical protein MMAR_5305 |
M. avium 104 | MAV_0314 | - | 1e-76 | 71.29% (202) | phosphoglycerate mutase family protein, putative |
M. smegmatis MC2 155 | MSMEG_6338 | - | 7e-86 | 73.27% (202) | phosphoglycerate mutase family protein, putative |
M. thermoresistible (build 8) | TH_1658 | - | 1e-78 | 66.00% (200) | phosphoglycerate mutase family protein, putative |
M. ulcerans Agy99 | MUL_4380 | - | 6e-78 | 68.81% (202) | hypothetical protein MUL_4380 |
CLUSTAL 2.0.9 multiple sequence alignment Mb2253c|M.bovis_AF2122/97 MKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEY Rv2228c|M.tuberculosis_H37Rv MKVVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEY MAB_1905|M.abscessus_ATCC_1997 MKVLVEADGGSRGNPGLAGYGAVVFSPDHQTVLGEACDAIGHATNNVAEY Mvan_5604|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_1203|M.gilvum_PYR-GCK -------------------------------------------------- MMAR_5305|M.marinum_M -------------------------------------------------- MUL_4380|M.ulcerans_Agy99 -------------------------------------------------- MAV_0314|M.avium_104 -------------------------------------------------- MSMEG_6338|M.smegmatis_MC2_155 -------------------------------------------------- TH_1658|M.thermoresistible__bu -------------------------------------------------- MLBr_01298|M.leprae_Br4923 -------------------------------------------------- Mb2253c|M.bovis_AF2122/97 RGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQ Rv2228c|M.tuberculosis_H37Rv RGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQ MAB_1905|M.abscessus_ATCC_1997 RGLIAGLAEAARLGATEVSVSMDSKLVVEQMSGRWKVKHPDLITLYQQAV Mvan_5604|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_1203|M.gilvum_PYR-GCK -------------------------------------------------- MMAR_5305|M.marinum_M -------------------------------------------------- MUL_4380|M.ulcerans_Agy99 -------------------------------------------------- MAV_0314|M.avium_104 -------------------------------------------------- MSMEG_6338|M.smegmatis_MC2_155 -------------------------------------------------- TH_1658|M.thermoresistible__bu -------------------------------------------------- MLBr_01298|M.leprae_Br4923 -------------------------------------------------- Mb2253c|M.bovis_AF2122/97 ALASQFRRINYEWVPRARNTYADRLANDAMD-AAAQSAAADADPAKIVAT Rv2228c|M.tuberculosis_H37Rv ALASQFRRINYEWVPRARNTYADRLANDAMD-AAAQSAAADADPAKIVAT MAB_1905|M.abscessus_ATCC_1997 TAAMQFESVDYTWIPRERNKHADRLANEAMDRASGIEPKKPKEIAEIKET Mvan_5604|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_1203|M.gilvum_PYR-GCK -------------------------------------------------- MMAR_5305|M.marinum_M --------------------------------------MRRGHVRGWAER MUL_4380|M.ulcerans_Agy99 -------------------------------------------------- MAV_0314|M.avium_104 -------------------------------------------------- MSMEG_6338|M.smegmatis_MC2_155 -------------------------------------------------- TH_1658|M.thermoresistible__bu -------------------------------------------------- MLBr_01298|M.leprae_Br4923 -------------------------------------------------- Mb2253c|M.bovis_AF2122/97 ESP-TSPGWTGARGTPTRLLLLRHGQTELSEQRRYSGRGN-PGLNEVGWR Rv2228c|M.tuberculosis_H37Rv ESP-TSPGWTGARGTPTRLLLLRHGQTELSEQRRYSGRGN-PGLNEVGWR MAB_1905|M.abscessus_ATCC_1997 KPADTAPGWTGARGKPTRMLLLRHGQTELSVQRRYSGRGN-PELTELGRE Mvan_5604|M.vanbaalenii_PYR-1 ----------------MQLLLVRH---ALPLRSEPGQGSD-PSLSAEGLE Mflv_1203|M.gilvum_PYR-GCK ----------------MQLLLVRH---ALPLRSEPGQGSD-PSLSPEGVE MMAR_5305|M.marinum_M PRPRAAHHTNHRMGAHMQMLLVRH---ALPLRSEHGEGSD-PVLSDTGVA MUL_4380|M.ulcerans_Agy99 ----------------MQMLLVRH---ALPLRSEHGEGSD-PVLSDTGVA MAV_0314|M.avium_104 ----------------MQVLLVRH---ALPLRSEHGQGSD-PDLSADGLA MSMEG_6338|M.smegmatis_MC2_155 ----------------MQLLLIRH---ALPLRSEPGQGSD-PVLSEIGLQ TH_1658|M.thermoresistible__bu ----------------VQLILVRH---ALPRRSEPGQGAD-PDLSEVGLE MLBr_01298|M.leprae_Br4923 ----------------MTVILLRHGRSTSNTAGVLAGRADGVDLDDRGRE ::*:** . .: * * Mb2253c|M.bovis_AF2122/97 QVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVVDDDLVET Rv2228c|M.tuberculosis_H37Rv QVGAAAGYLARRGGIAAVVSSPLQRAYDTAVTAARALALDVVVDDDLVET MAB_1905|M.abscessus_ATCC_1997 QAARAARYLASRGGIAAVISSPLSRAKETAAAAAGALGVPLTVDDDLIET Mvan_5604|M.vanbaalenii_PYR-1 QAKRLPDALARFP-ITRLVSSPQVRAIETGQPVADALGLPIEVDDRLAEY Mflv_1203|M.gilvum_PYR-GCK QARRLPDALARFP-ITRLVSSPQVRAIETGQPVADKLGLTIEVDDRLAEY MMAR_5305|M.marinum_M QVSRLPEALSRFP-ITRVISSPQRRAVQTAEPVATARGLAIDIDDRFAEY MUL_4380|M.ulcerans_Agy99 QVSRLPEALSRFP-ITRVISSPQRRAVQTAESVATARGLAIDIDDRFAEY MAV_0314|M.avium_104 QIERLPKALERFP-ISRVVSSPQRRAVQTAAPVAADRGLSVEIDDRFAEY MSMEG_6338|M.smegmatis_MC2_155 QAVRLPDALKRFP-VTRVVSSPQRRAVQTGEPLAGALGLPVEIDERLAEY TH_1658|M.thermoresistible__bu QARRLPAALERFP-IARVISSPQRRAVQTAEPVADALGLPVHIDERFAEY MLBr_01298|M.leprae_Br4923 QAVGLIDRIAELP-IRAVVCSPLLRCRRTINPLAETLCLEPFIDDRLSEV * : : ::.** *. * . * : :*: : * Mb2253c|M.bovis_AF2122/97 DFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGR- Rv2228c|M.tuberculosis_H37Rv DFGAWEGLTFAEAAERDPELHRRWLQDTSITPPGGESFDDVLRRVRRGR- MAB_1905|M.abscessus_ATCC_1997 DFGKWEGLTFSEASERDPELHRQWLSDTSITPPEGESFDTVHHRVRRAR- Mvan_5604|M.vanbaalenii_PYR-1 DRDLAHYIPIEQIAAERPEELQRLIDG---HLPSAVDEAAFLARVTAGI- Mflv_1203|M.gilvum_PYR-GCK DRDLPHYIPIEQIAKENPEELQRLVDG---HLPSSVDETQFLARISAGI- MMAR_5305|M.marinum_M DRDLPHYIPVEQIRTENPQEWARMAQG---KLPSAVDEDAFRARVRAVV- MUL_4380|M.ulcerans_Agy99 DRDLPHYIPVEQIRTEKPQEWARMAQG---KLPSAVDEDAFRARVRAVV- MAV_0314|M.avium_104 DRDLPVYIPVEQIRDEMPEEWARLAQG---HLPSAVDEDAFRARVRAAV- MSMEG_6338|M.smegmatis_MC2_155 DRDMSHYVPIEQIAQENPAELARLAGG---HLPSGVDEEEFAGRIGAAF- TH_1658|M.thermoresistible__bu DRGLAHYVPIEEVARENPEQLERLLNG---ELPGAVDPDEFQDRVAAAL- MLBr_01298|M.leprae_Br4923 DYGEWTGRSIGDLAKEPLWQVVQAHPS-AAVFPSGEGLAQVQVRAVAAIR * . .. : . : . * . . . * Mb2253c|M.bovis_AF2122/97 ---DRIIVGYEG-ATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASL Rv2228c|M.tuberculosis_H37Rv ---DRIIVGYEG-ATVLVVSHVTPIKMLLRLALDAGSGVLYRLHLDLASL MAB_1905|M.abscessus_ATCC_1997 ---NRIIAEYGG-ATVLVVSHVTPIKTLLRLALDAGPSVLYRLHLDLASL Mvan_5604|M.vanbaalenii_PYR-1 ---EDLVTGAGHDDTVAVFSHGGVINVLLHHVLRTER--LLSFHVDYASV Mflv_1203|M.gilvum_PYR-GCK ---DDLVASADRDDTVVVFSHGGVINVLLHQILGTER--LLSFHVDYASV MMAR_5305|M.marinum_M ---DDVVSAAGSDDTVAVFSHGGLINVVLHEILGTAR--LLSFPIDYASV MUL_4380|M.ulcerans_Agy99 ---DDVVSAAGSDDTVAVFSHGGVINVVLHEILGTAR--LLSFPIDYASI MAV_0314|M.avium_104 ---DDLVAAAEPEDTVAVFSHGGVINVLLHEILGTAR--LLSFPVDYASV MSMEG_6338|M.smegmatis_MC2_155 ---DDLVAAGNHEDTVAVFSHGGVINVALHGILKTER--LLSFHIDYASV TH_1658|M.thermoresistible__bu ---DEVVATSAHTDTVAVFSHGGVINAILHRIARTER--LITFHIDYASV MLBr_01298|M.leprae_Br4923 EYDRRFTSEHGGDTLWVACTHGDVIKAVIADAFGMHLDSFQRVIADPGSV . . :* *: : : . * .*: Mb2253c|M.bovis_AF2122/97 SIAEFYADG-ASSVRLVNQTGYL--------------------------- Rv2228c|M.tuberculosis_H37Rv SIAEFYADG-ASSVRLVNQTGYL--------------------------- MAB_1905|M.abscessus_ATCC_1997 SIAEFYSDG-PASVRLVNETSYLT-------------------------- Mvan_5604|M.vanbaalenii_PYR-1 TRLLSSRTG-RLAVAGVNGTEHVWDLLPRNQ--RW--------------- Mflv_1203|M.gilvum_PYR-GCK TRLLWSASRERLAVACVNGTEHVWDLLPRNH--RW--------------- MMAR_5305|M.marinum_M TRLLFSRTG-QATVATVNSTEHVWDLLPRNQ--RW--------------- MUL_4380|M.ulcerans_Agy99 TRLLFSRTG-QATVATVNSTEHVWDLLPRNQ--RW--------------- MAV_0314|M.avium_104 TRLLFSRSG-QATVAAVNTTEHVWDLLPRIQ--RW--------------- MSMEG_6338|M.smegmatis_MC2_155 TRVLASRSG-RLSVASVNSTEHVWDLLPRNA--RW--------------- TH_1658|M.thermoresistible__bu TRVLASRSG-RLSIGGINTVEHVWDLLPRNRDGRLQGTAAVSDNKEVIDN MLBr_01298|M.leprae_Br4923 SVIRYTQLR--PFVLHVNHTGAQLSSALRAAMKPSGESHSDSCGERSGEI : : :* . Mb2253c|M.bovis_AF2122/97 -------------------- Rv2228c|M.tuberculosis_H37Rv -------------------- MAB_1905|M.abscessus_ATCC_1997 -------------------- Mvan_5604|M.vanbaalenii_PYR-1 -------------------- Mflv_1203|M.gilvum_PYR-GCK -------------------- MMAR_5305|M.marinum_M -------------------- MUL_4380|M.ulcerans_Agy99 -------------------- MAV_0314|M.avium_104 -------------------- MSMEG_6338|M.smegmatis_MC2_155 -------------------- TH_1658|M.thermoresistible__bu GRDLPRRT------------ MLBr_01298|M.leprae_Br4923 RNEPDAAVPSGDAVLGGSAD