For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. vanbaalenii PYR-1 Mvan_5461 (-)

annotation: PadR-like family transcriptional regulator
coordinates: 5843236 - 5843763
length: 175

MSLRIAALGLLAEGSASGYDLLKQFEKSMANVWPATQSQLYSELNKLAAGGLIEVCAVGPRGRKEYRITD
AGRAELQRWVAERQDDPPVRSAGLLRVFLLGLVPPEQARAHLHAMAEEADGEVRRLTELRESLTGGRAAD
PTDESFFGFAALDYGLRLNAMQAEWARSVIDRLDT
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_5461--100% (175)PadR-like family transcriptional regulator
M. vanbaalenii PYR-1Mvan_2867-2e-0832.09% (134) PadR-like family transcriptional regulator
M. vanbaalenii PYR-1Mvan_6039-9e-0624.14% (174) PadR-like family transcriptional regulator

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1209c-7e-1240.00% (85) hypothetical protein Mb1209c
M. gilvum PYR-GCKMflv_1331-1e-5160.82% (171) PadR-like family transcriptional regulator
M. tuberculosis H37RvRv1176c-7e-1240.00% (85) hypothetical protein Rv1176c
M. leprae Br4923MLBr_02691-9e-0726.29% (175) hypothetical protein MLBr_02691
M. abscessus ATCC 19977MAB_0082c-9e-0930.81% (172) hypothetical protein MAB_0082c
M. marinum MMMAR_3454-2e-4856.90% (174) putative regulatory protein
M. avium 104MAV_0135-1e-1736.36% (143) transcriptional regulator, PadR family protein
M. smegmatis MC2 155MSMEG_6226-3e-6168.57% (175) transcriptional regulator
M. thermoresistible (build 8)TH_0324-5e-1031.21% (173) transcriptional regulator, PadR family protein
M. ulcerans Agy99MUL_2728-3e-4655.75% (174) putative regulatory protein

CLUSTAL 2.0.9 multiple sequence alignment


Mvan_5461|M.vanbaalenii_PYR-1       --------------MSLRIAALGLLA-EGSASGYDLLKQFEKSMANVWP-
MSMEG_6226|M.smegmatis_MC2_155      --------------MSLRMAALGLLV-QQPGSGYDLLRRFEKSMANVWP-
Mflv_1331|M.gilvum_PYR-GCK          --MSIVECHRYYSSMSLRMAALGLLA-QHPASGYDLLKKFEVSMANVWP-
MMAR_3454|M.marinum_M               --------------MSLRHAALGLLS-QEPGSGYDLLKRFQLSMNNVWP-
MUL_2728|M.ulcerans_Agy99           --------------MSLRHAALGLLS-QEPGSGYDLLKRFQLSMNNVWP-
MAB_0082c|M.abscessus_ATCC_199      --MAAISSPGEPNLAATSWTILGMLSYEEEVSGYDIKKWADWSISYFYWS
TH_0324|M.thermoresistible__bu      VTEAVEDAADQPNLSPTGWALLGMLSGGNELSGYDIKKWTDWVIRFFYSS
Mb1209c|M.bovis_AF2122/97           --------------MALPHAILVSLC-EQASSGYELARRFDRSIGYFWT-
Rv1176c|M.tuberculosis_H37Rv        --------------MALPHAILVSLC-EQASSGYELARRFDRSIGYFWT-
MAV_0135|M.avium_104                --------------MSLRDAVLAALL-EGESSGYDLAKDFDASVANFWP-
MLBr_02691|M.leprae_Br4923          ---------------MLELAILGLLI-ESPMHGYELRKRLTGLLGAFRA-
                                                       : *  *       **:: :     :  .   

Mvan_5461|M.vanbaalenii_PYR-1       ATQSQLYSELNKLAAGGLIEV-----CAVGPRGRKEYRITDAGRAELQRW
MSMEG_6226|M.smegmatis_MC2_155      ATQSQLYGELNKLAAAGLIEV-----SAVGPRGRKEYRATDAGRAELLRW
Mflv_1331|M.gilvum_PYR-GCK          GTQSQLYSELNKLADDGLIEV-----TAIGARGRKEYAITRPGRDELRRW
MMAR_3454|M.marinum_M               ATQSQLYSELNKLAAAGLIKS-----SDLGPRGRKEYAITDAGRAELYRW
MUL_2728|M.ulcerans_Agy99           ATQSQLYSELNKLAAAGLIKS-----SDLGPRGRKEYAITDAGRAELYRW
MAB_0082c|M.abscessus_ATCC_199      PSFSQVYSELRKLEKIGYATSRVD--HDNGARSRRLYKITPAGMAAMSQW
TH_0324|M.thermoresistible__bu      PAYSQIYSELKRLEQYGLVTSRIE--GS--TRSRRMYKITDAGLAAVTRW
Mb1209c|M.bovis_AF2122/97           ATHQQIYRTLRVMENNNWVRATTV--LQHGRPDKKVYAISDSGRAELARW
Rv1176c|M.tuberculosis_H37Rv        ATHQQIYRTLRVMENNNWVRATTV--LQHGRPDKKVYAISDSGRAELARW
MAV_0135|M.avium_104                ATPQQLYRELDRLAGQGLIRARVV--HQQRRPNKRMFSLTAAGRAAIRRF
MLBr_02691|M.leprae_Br4923          FSYGSLYPALRRMQADRLITGHVAPAGTPVRRARQVYQLTDAGRRRFSEL
                                     :  .:*  *  :                    :: :  : .*   . . 

Mvan_5461|M.vanbaalenii_PYR-1       VAE-RQDDPPVRSAGLLRVFLLGLVPPEQARAHLHAMAEEADGEVRRLTE
MSMEG_6226|M.smegmatis_MC2_155      ITN-PQDDPPERSAELLRVFLLGELPPEQAREHLVMLASHSDGEVERLRA
Mflv_1331|M.gilvum_PYR-GCK          VMD-FHDDPPQRSSALLRVFLLSAVPSEEAGKYMIAVAEHAERDLARYEA
MMAR_3454|M.marinum_M               MTS-PQQDPPVRNAALLRVFLLGQLDPSQARSYLESLLSLSEQEKTHYEQ
MUL_2728|M.ulcerans_Agy99           MTS-PQQDPPVRNAALLRVFLLGQLDPSQAGSYLESLLSLSEQEKTHYER
MAB_0082c|M.abscessus_ATCC_199      ANETPAEPQVLKHSVVLRVMQGHMTDPARLKEILERHIEYAEN-MQRRAA
TH_0324|M.thermoresistible__bu      TNEEPVEAPTLKHSPMLRVVFGHLTNPGRLKEVLAEHAAYADR-MQREAA
Mb1209c|M.bovis_AF2122/97           IAEPLSPTRPGRGSALTDSSTRDIAVKLRGAGYGDVAALYTQVTALRAER
Rv1176c|M.tuberculosis_H37Rv        IAEPLSPTRPGRGSALTDSSTRDIAVKLRGAGYGDVAALYTQVTALRAER
MAV_0135|M.avium_104                TATAPRPS-VIRDELLIKVQAADAGDMRAVRDAIRERRDWATAKLARYQR
MLBr_02691|M.leprae_Br4923          VTDTGPDNYTDNGFGVHLAFFNRTPAEARMRILEGRRRRVEERREGLREA
                                               .   :                                  

Mvan_5461|M.vanbaalenii_PYR-1       LRESLTGG--------RAADPTDESFFGFAALDYGLRLNAMQAEWARSVI
MSMEG_6226|M.smegmatis_MC2_155      LEAAID----------WAGEP-GADVFSHAALDYGLRMHTMQAQWARDVI
Mflv_1331|M.gilvum_PYR-GCK          LRDAVP----------WNQSD-DDDFYGRAALEFGLRQAAMTADWARWVA
MMAR_3454|M.marinum_M               IRDAYD----------WAEDD--DSFFARAALEQGLRWAQQEIEWAKWVI
MUL_2728|M.ulcerans_Agy99           IRYAYD----------WAEDD--DSFFARAAPEQGLRWAQQEIEWAKWVI
MAB_0082c|M.abscessus_ATCC_199      LDAAGA-----------AAQP--AWAYSRVALKWAERYYAAERDLAMMMI
TH_0324|M.thermoresistible__bu      TEARHT-----------AEQP--AWSYARLALQWSERYYAAERDLALQLI
Mb1209c|M.bovis_AF2122/97           VKSLDTYRGIEKRTFADPSALDGAALHQYLVLRGGIRAEESAIDWLDEVA
Rv1176c|M.tuberculosis_H37Rv        VKSLDTYRGIEKRTFADPSALDGAALHQYLVLRGGIRAEESAIDWLDEVA
MAV_0135|M.avium_104                LRARLLDGRSE-----EDYLARAERIGPYLTLIRGISFEEDNIRWAEHAL
MLBr_02691|M.leprae_Br4923          VTRASN----------------SFDRYTRQLHQLGLESSEREVKWLNELI
                                                                      .               

Mvan_5461|M.vanbaalenii_PYR-1       DRLDT------------------------------------------
MSMEG_6226|M.smegmatis_MC2_155      ARMDTNR----------------------------------------
Mflv_1331|M.gilvum_PYR-GCK          DGIRARQK---------------------------------------
MMAR_3454|M.marinum_M               AGLDQRSGVAPAGQG--------------------------------
MUL_2728|M.ulcerans_Agy99           AGLDQRSGVAPAGQG--------------------------------
MAB_0082c|M.abscessus_ATCC_199      EDLAEAAEEFDKAGPDGGTPRLVPGYWREVEKRVDAEKLSTQHDTAD
TH_0324|M.thermoresistible__bu      KDLDVADRIFTEAE-QSGLEWPVREYWYEVERRIAAEKDRE------
Mb1209c|M.bovis_AF2122/97           EALQEKR----------------------------------------
Rv1176c|M.tuberculosis_H37Rv        EALQEKR----------------------------------------
MAV_0135|M.avium_104                AVIARRLPTTDADSDAGDSRLVGPATNG-------------------
MLBr_02691|M.leprae_Br4923          AAERALLGRVEQT----------------------------------