For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
 
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation | 
| M. thermoresistible (build 8) | TH_0324 | - | - | 100% (223) | transcriptional regulator, PadR family protein | 
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation | 
| M. bovis AF2122 / 97 | - | - | - | - | - | 
| M. gilvum PYR-GCK | Mflv_4568 | - | 1e-73 | 58.85% (226) | PadR-like family transcriptional regulator | 
| M. tuberculosis H37Rv | - | - | - | - | - | 
| M. leprae Br4923 | MLBr_02691 | - | 7e-05 | 22.44% (156) | hypothetical protein MLBr_02691 | 
| M. abscessus ATCC 19977 | MAB_0082c | - | 1e-65 | 55.66% (212) | hypothetical protein MAB_0082c | 
| M. marinum M | MMAR_3454 | - | 2e-10 | 31.36% (169) | putative regulatory protein | 
| M. avium 104 | MAV_3044 | - | 9e-68 | 54.30% (221) | transcriptional regulator, PadR family protein | 
| M. smegmatis MC2 155 | MSMEG_2868 | - | 1e-92 | 73.42% (222) | transcriptional regulator, PadR family protein | 
| M. ulcerans Agy99 | MUL_2388 | - | 1e-09 | 29.55% (132) | hypothetical protein MUL_2388 | 
| M. vanbaalenii PYR-1 | Mvan_2867 | - | 6e-91 | 74.15% (205) | PadR-like family transcriptional regulator | 
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_2868|M.smegmatis_MC2_155      MTDAADTPLG-ELNVSPTGWALLGMLSGGDELSGYDIKKWINWAIQFFYS
Mvan_2867|M.vanbaalenii_PYR-1       --------------MSPTGWALLGMLSGGEEMSGYDIKKWINWAIRFFYS
TH_0324|M.thermoresistible__bu      VTEAVEDAAD-QPNLSPTGWALLGMLSGGNELSGYDIKKWTDWVIRFFYS
Mflv_4568|M.gilvum_PYR-GCK          MTDSADSGSGRKPGLAATSYALLGLLSYEQELSGYDIRKWIGWTMRFYYG
MAB_0082c|M.abscessus_ATCC_199      -MAAISSPG--EPNLAATSWTILGMLSYEEEVSGYDIKKWADWSISYFYW
MAV_3044|M.avium_104                -MASETDPASQKPALAATSWALLGMMSYEEEVSGYDLKKWIDWSVDLYYW
MMAR_3454|M.marinum_M               ---------------MSLRHAALGLLS-QEPGSGYDLLKRFQLSMNNVWP
MUL_2388|M.ulcerans_Agy99           ----------MTPQPTASSFAVLGLLG-VQPWTAYELVAQSKRSLHWFWP
MLBr_02691|M.leprae_Br4923          ----------------MLELAILGLLI-ESPMHGYELRKRLT-GLLGAFR
                                                        : **::   .   .*::       :   : 
MSMEG_2868|M.smegmatis_MC2_155      SPAYSQIYSELKRLERLGLVSSRVD----AGARSRRMYKITDAGLSAVTR
Mvan_2867|M.vanbaalenii_PYR-1       SPAYSQIYSELKRLERLGLVSSRVD----AGVRSRRMYKITESGLAAVTR
TH_0324|M.thermoresistible__bu      SPAYSQIYSELKRLEQYGLVTSRIE----GSTRSRRMYKITDAGLAAVTR
Mflv_4568|M.gilvum_PYR-GCK          SPAYSQIYSELKKLESLGLVTSRVEST--GGARSRRLYKIAPAGLDEVIR
MAB_0082c|M.abscessus_ATCC_199      SPSFSQVYSELRKLEKIGYATSRVDHD--NGARSRRLYKITPAGMAAMSQ
MAV_3044|M.avium_104                SPSYSQIYTELKKLEALGLVTSRVERD--EGTRSRRLYKITPAGMDAVTQ
MMAR_3454|M.marinum_M               -ATQSQLYSELNKLAAAGLIKSSDL-----GPRGRKEYAITDAGRAELYR
MUL_2388|M.ulcerans_Agy99           -RSERHLYAELKRLVERGHAEAHVE----GGRRRRTRYTITPAGRAALQA
MLBr_02691|M.leprae_Br4923          AFSYGSLYPALRRMQADRLITGHVAPAGTPVRRARQVYQLTDAGRRRFSE
                                      :   :*. *.::       .          * *  * :: :*   .  
MSMEG_2868|M.smegmatis_MC2_155      WANEEAVEPPTLKHNPVLRVMLGHLLKPGRLREVLAEHADYADR--MHQA
Mvan_2867|M.vanbaalenii_PYR-1       WANEDPVEAPTLKHNPILRMMLGHLLKPGRLREILAGHAAYAEQ--LQQA
TH_0324|M.thermoresistible__bu      WTNEEPVEAPTLKHSPMLRVVFGHLTNPGRLKEVLAEHAAYADR--MQRE
Mflv_4568|M.gilvum_PYR-GCK          WANDEPFDPPSLKHGPLLRMTFGHLSTPARLKELLNEHIAYADE--MERE
MAB_0082c|M.abscessus_ATCC_199      WANETPAEPQVLKHSVVLRVMQGHMTDPARLKEILERHIEYAEN--MQRR
MAV_3044|M.avium_104                WTNHAPVDPPVLKHSVLLRVTFGHLSNPGRLKELLQEHVAYAEA--RHRK
MMAR_3454|M.marinum_M               WMTSPQQDPP-VRNAALLRVFLLGQLDPSQARSYLESLLSLSEQEKTHYE
MUL_2388|M.ulcerans_Agy99           WLGTEP-APPTLEIEGLVRVMLADQGNMDDLRAAVEATARQART--VRAE
MLBr_02691|M.leprae_Br4923          LVTDTGPDNYTDNGFGVHLAFFNRTPAEARMRILEGRRRRVEER----RE
                                                .   :              :                  
MSMEG_2868|M.smegmatis_MC2_155      AATEARWTEDQPAWSYAGLALRWSERYYAAERELALQMIKDLDAVEAQLA
Mvan_2867|M.vanbaalenii_PYR-1       AATEVRWTSEQPAWSYARLALKWSEQYYAAERELALQMIKDLDAAEEAFG
TH_0324|M.thermoresistible__bu      AATEARHTAEQPAWSYARLALQWSERYYAAERDLALQLIKDLDVADRIFT
Mflv_4568|M.gilvum_PYR-GCK          AAKDARLAGADPSWAYARVALRWAERYYANERELALQMIKDLDEAEAEFP
MAB_0082c|M.abscessus_ATCC_199      AALDAAGAAAQPAWAYSRVALKWAERYYAAERDLAMMMIEDLAEAAEEFD
MAV_3044|M.avium_104                AMEDAEGAEAEPAWAYSVLALRWAAKYYAAEREFALEMIKEIDEADAILQ
MMAR_3454|M.marinum_M               QIRDAYDWAEDDDSFFARAALEQGLRWAQQEIEWAKWVIAGLDQRSGVAP
MUL_2388|M.ulcerans_Agy99           GLPFVAELLATGGPFPQRLHLN--ERLVSFYSDFNNLLLRWCEETLADVE
MLBr_02691|M.leprae_Br4923          GLREAVTRASNSFDRYTRQLHQLGLESSEREVKWLNELIAAERALLGRVE
                                        .                .   .      .    ::           
MSMEG_2868|M.smegmatis_MC2_155      ETGA---QNMEFPVREYWYEVERRIAAEETDETPPGAQRPD-
Mvan_2867|M.vanbaalenii_PYR-1       EAGR---EGVQFPMPEYWYEVERRIAAEDT----PGVEDPSA
TH_0324|M.thermoresistible__bu      EAEQ---SGLEWPVREYWYEVERRIAAEKD------RE----
Mflv_4568|M.gilvum_PYR-GCK          RAAHGDQAAVAWPEPAYWYEVEQRAQSEADS-----------
MAB_0082c|M.abscessus_ATCC_199      KAGP-DG-GTPRLVPGYWREVEKRVDAEKLSTQHDTAD----
MAV_3044|M.avium_104                RAAK-GGYGKPRPTPGYWREVEKQVQAKREAE----------
MMAR_3454|M.marinum_M               AGQG--------------------------------------
MUL_2388|M.ulcerans_Agy99           TWQG---TQDIGLTPSGRQRLVRAISEDP-------------
MLBr_02691|M.leprae_Br4923          QT----------------------------------------