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MSLHSHPEIVGKFLSTLPEDDDHPYRTGPWRPQTTEWDDDDLKVVEGRIPDDLDGVYLRNTENPLHPALK YYHPFDGDGMLHIVGFRDGKAFYRNRFVRTDAFAEENEAGGPLWPGIAEPLELARRDYGWGARTLMKDAS STDVVVHRGVALTSHYQCGDLYRIDPRTGAALGKEDWHGTFPSDWGVSAHPKIDDHTGELLFFNYSKQAP YMRYGVVSPAGEVVHNVDVPLPGPRLPHDMAFTENYVILNDFPLFWDTGLLEHNIHFPRFHRDMPSRFAV VPRRGDTSQIKWFETAPTYVLHFPNAYEDGDEIVLDGFFQGDPEPTDGVDNGMSGKWRQIFRSLSLDGMQ TRLHRWRFNLVTGEAREEQLSDSITEFGMINPAYSGRPYRYTYAATGKPGWFLFDGLVRHDLHTGTEQRY GFGDGVYGSETAMAPRVGSAAADHIGGSAAAHIGGSAAAHIGGSAAEDDGYLVTLTTDMAADASYCLVFD AARVGDGPVCKLQLPERISSGTHSTWAPGADLPQWRESDSAAGAIGL
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_4940 | - | - | 100% (537) | carotenoid oxygenase |
| M. vanbaalenii PYR-1 | Mvan_5460 | - | 4e-49 | 31.67% (502) | carotenoid oxygenase |
| M. vanbaalenii PYR-1 | Mvan_4595 | - | 1e-46 | 30.76% (543) | carotenoid oxygenase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0937c | - | 0.0 | 71.46% (529) | dioxygenase |
| M. gilvum PYR-GCK | Mflv_1807 | - | 0.0 | 84.73% (537) | carotenoid oxygenase |
| M. tuberculosis H37Rv | Rv0913c | - | 0.0 | 71.64% (529) | dioxygenase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3874c | - | 7e-44 | 27.11% (557) | putative dioxygenase |
| M. marinum M | MMAR_4614 | - | 0.0 | 72.64% (530) | dioxygenase |
| M. avium 104 | MAV_0560 | - | 5e-45 | 29.54% (545) | carotenoid oxygenase |
| M. smegmatis MC2 155 | MSMEG_5609 | - | 0.0 | 75.42% (533) | carotenoid oxygenase |
| M. thermoresistible (build 8) | TH_3959 | - | 1e-46 | 30.44% (542) | PUTATIVE Carotenoid oxygenase |
| M. ulcerans Agy99 | MUL_0155 | - | 0.0 | 72.45% (530) | dioxygenase |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0937c|M.bovis_AF2122/97 ----MDITIVGKYLSTLPEDDDHPYRTGPWRPQTTEWDADDLTTVTGEVP
Rv0913c|M.tuberculosis_H37Rv ----MDITIVGKYLSTLPEDDDHPYRTGPWRPQTTEWDADDLTTVTGEVP
MMAR_4614|M.marinum_M ----MDVEIVGKYLSTLPEDDDHPYRTGPWRPQTTEWNADDLTVVEGEIP
MUL_0155|M.ulcerans_Agy99 ----MDVEIVGKYLSTLPEDDDHPYRTGPWRPQTTEWNADDLTVVEGEIP
Mvan_4940|M.vanbaalenii_PYR-1 MSLHSHPEIVGKFLSTLPEDDDHPYRTGPWRPQTTEWDDDDLKVVEGRIP
Mflv_1807|M.gilvum_PYR-GCK MTAGTHPEVVGKFLSTLPEDDDHPYRTGPWRPQTTEWDDDDLRVVEGQIP
MSMEG_5609|M.smegmatis_MC2_155 ----MHTEVVAKYLSTLPEDDTHPYRTGAWRPQTTEWDADDLTVVEGEIP
MAV_0560|M.avium_104 --------------------MANRYLQGPFAPMHHEYTLTGLEVVG-TIP
TH_3959|M.thermoresistible__bu --------------------VSNRYLTGAFAPLTEEYTLTDLEVTG-TIP
MAB_3874c|M.abscessus_ATCC_199 -----------MTATAQPAASTSPYLSGIWEPVQQEMDSVDLEVTG-TLP
* * : * * .* .. :*
Mb0937c|M.bovis_AF2122/97 ADLDGIYLRNTENPLHPA-FATYHPFDGDGMIHVVGFRDG-KAFYRNRFI
Rv0913c|M.tuberculosis_H37Rv ADLDGIYLRNTENPLHPA-FATYHPFDGDGMIHVVGFRDG-KAFYRNRFI
MMAR_4614|M.marinum_M HDLDGVYLRNTENPLHPA-FKTYHPFDGDGMLHVVGFRDG-KAFYRNRFI
MUL_0155|M.ulcerans_Agy99 HDLDGVYLRNTENPLHPA-FKTYHPFDGDGMLHVVGFRDG-KAFYRNRFI
Mvan_4940|M.vanbaalenii_PYR-1 DDLDGVYLRNTENPLHPA-LKYYHPFDGDGMLHIVGFRDG-KAFYRNRFV
Mflv_1807|M.gilvum_PYR-GCK GDLDGVYLRNTENPLHPA-LKYYHPFDGDGMLHMVGFRDG-KAFYRNRFV
MSMEG_5609|M.smegmatis_MC2_155 ADLDGVYLRNTENPMHPA-FKVYHPFDGDGMLHVVGFRDG-KAFYRNRFV
MAV_0560|M.avium_104 DYLDGRYLRNGANPIGDVDPERYHWFLGDGMVHGIRIRDGKAEWYRNRWV
TH_3959|M.thermoresistible__bu DYLDGRYLRNGPNPVGEIDPELYHWFVGDGMVHGIRLRDGRAEWYRNRWV
MAB_3874c|M.abscessus_ATCC_199 AHLDGRYLRNGPNPAAEVDPATYHLFSGDAMVHGLSLREGKAQWYRNRWV
*** **** ** ** * **.*:* : :*:* :****::
Mb0937c|M.bovis_AF2122/97 RTDGFLAENEAGGPLWPGLAEPVQLAKREHGWGARGLMKDASSTDVIVHR
Rv0913c|M.tuberculosis_H37Rv RTDGFLAENEAGGPLWPGLAEPVQLAKREHGWGARGLMKDASSTDVIVHR
MMAR_4614|M.marinum_M QTDGFQAENEAGEPLWPGLAEPIQLAKRDQGWGARTLMKDASSTDVIVHR
MUL_0155|M.ulcerans_Agy99 QTDGFRAENEAGEPLWPGLAEPIQLAKRDQGWGARTLMKDASSTDVIVYR
Mvan_4940|M.vanbaalenii_PYR-1 RTDAFAEENEAGGPLWPGIAEPLELARRDYGWGARTLMKDASSTDVVVHR
Mflv_1807|M.gilvum_PYR-GCK RTDALAAENEAGGPLWPGIAEPIELAKRDYGWGARTLMKDASSTDVIVHR
MSMEG_5609|M.smegmatis_MC2_155 RTDGLLEENAEGGPLWPGIAEPVELAKRDYGWGARTLMKDASSTDVTVHR
MAV_0560|M.avium_104 RS--------------PATSKALGQPAP---PGHFGFFPIGANTNVIGHA
TH_3959|M.thermoresistible__bu RG--------------PLTARALGERPP---SEECSVSGIGANTNVIGHA
MAB_3874c|M.abscessus_ATCC_199 RT--------------PSVSKTLGETRPAAISANAGMGVIGPNTNVLGHA
: * :..: . ...*:* :
Mb0937c|M.bovis_AF2122/97 GIALTSFYQCGDLYRIDPYSANTLGKESWHGRFPFDWGVSAHPKVDNKTG
Rv0913c|M.tuberculosis_H37Rv GIALTSFYQCGDLYRIDPYSANTLGKESWHGRFPFDWGVSAHPKVDNKTG
MMAR_4614|M.marinum_M GIALTSFYQCGDLYRVDPSSATTLGKENWSGNFPFDWGVSAHPKVDGKTG
MUL_0155|M.ulcerans_Agy99 GIALTSFYQCGDLYRVDPSSATTLGKETWSGHFPFDWGVSAHPKVDGKTG
Mvan_4940|M.vanbaalenii_PYR-1 GVALTSHYQCGDLYRIDPRTGAALGKEDWHGTFPSDWGVSAHPKIDDHTG
Mflv_1807|M.gilvum_PYR-GCK GVALTSHYQCGDLYRIDPCTGADLGKEDWNGGFPTDWGVSAHPKVDDRTG
MSMEG_5609|M.smegmatis_MC2_155 GVALTSFYQCGDLYRINPHTGDTLGKENWNGGFPVDWGVSAHPKNDDRTG
MAV_0560|M.avium_104 GKTLALIEGGIANYELT-EELDTVGVCDFAGTLTG--GYAAHPHRDPETG
TH_3959|M.thermoresistible__bu GKTIALVESGVTNYELT-EELDTVGPCDFDGTLTG--GYTAHPKRDPETG
MAB_3874c|M.abscessus_ATCC_199 GRTLALVEGGIANYELT-EDLDTIGTCDFDGTLPG--GYTAHPHTDPDTG
* ::: *.: :* : * :. * :***: * **
Mb0937c|M.bovis_AF2122/97 ELLFFNYSKQ-EPYMRYGVVDQNNELVHYVDVPLPGPRLLHDMAFTENYV
Rv0913c|M.tuberculosis_H37Rv ELLFFNYSKQ-EPYMRYGVVDQNNELVHYVDVPLPGPRLPHDMAFTENYV
MMAR_4614|M.marinum_M ELLFFNYSKQ-EPYMRYGVVDQDNELAHYVDIPLPGPRLPHDMAFTENYA
MUL_0155|M.ulcerans_Agy99 ELLFFNYSKQ-EPYMRYGVVDQDNELAHYVDIPLPGPRLPHDMAFTENYA
Mvan_4940|M.vanbaalenii_PYR-1 ELLFFNYSKQ-APYMRYGVVSPAGEVVHNVDVPLPGPRLPHDMAFTENYV
Mflv_1807|M.gilvum_PYR-GCK ELLFFNYSKQ-APFMRYGVVSPAGDVVHNVDVPLPGPRLPHDMAFTENYV
MSMEG_5609|M.smegmatis_MC2_155 ELLFFNYGKQ-APYMHFGVVDQNNNLVHYTDVELPGPRLPHDMAFTENYV
MAV_0560|M.avium_104 ELHAVSYNPYRGNRVQYSVIDVEGRARRTVDVTVGGSPMMHDFSLTERYV
TH_3959|M.thermoresistible__bu ELHAVSYSMYRGNTVQYSVIGTDGRARRTVDIEVTGSPMMHDFSLTERHI
MAB_3874c|M.abscessus_ATCC_199 EMHAVSYSFARGSTVQYSVIDAHGRARRTVDIPVHGAPMMHDFTLTEKYV
*: ..*. :::.*:. . : .*: : *. : **:::**.:
Mb0937c|M.bovis_AF2122/97 ILNDFPLFWDPRLLERDVHLPR----------------------------
Rv0913c|M.tuberculosis_H37Rv ILNDFPLFWDPRLLERDVHLPR----------------------------
MMAR_4614|M.marinum_M ILNDFPLFWDPQLLEHNLHLPR----------------------------
MUL_0155|M.ulcerans_Agy99 ILNDFPLFWDPQLLEHNLHLPR----------------------------
Mvan_4940|M.vanbaalenii_PYR-1 ILNDFPLFWDTGLLEHNIHFPR----------------------------
Mflv_1807|M.gilvum_PYR-GCK ILNDFPLFWDTGLLEHNIHLPR----------------------------
MSMEG_5609|M.smegmatis_MC2_155 ILNDFPMFWDAEFLKHNAHIPR----------------------------
MAV_0560|M.avium_104 VFYDLPVTFDA-AVGAAMTAPRGLRPIARLMLSALIGRVAIPDPIAARLP
TH_3959|M.thermoresistible__bu VLYDLPVTFDA-RQAVSMTVPRGLRLPARLVLSALIGRVRVPDPIAARQP
MAB_3874c|M.abscessus_ATCC_199 VFYDLPVTLDMSMISQSVPVPRLLRKPAQIVMNSLIGKVKIPGPIAAKAS
:: *:*: * **
Mb0937c|M.bovis_AF2122/97 ------------FYPEIPSRFAVVARRGN------DIRWFEADPTFVLHF
Rv0913c|M.tuberculosis_H37Rv ------------FYPEIPSRFAVVARRGN------DIRWFEADPTFVLHF
MMAR_4614|M.marinum_M ------------FYPDMPSRFAVIPRRGST----ADIRWFEADPTFVLHF
MUL_0155|M.ulcerans_Agy99 ------------FYPDMPSRFAVIPRRGST----ADIRWFEADPTFVLHF
Mvan_4940|M.vanbaalenii_PYR-1 ------------FHRDMPSRFAVVPRRGDT----SQIKWFETAPTYVLHF
Mflv_1807|M.gilvum_PYR-GCK ------------FHRDVPSRFAVLPRRGDT----SQIMWFEADPTYVLHF
MSMEG_5609|M.smegmatis_MC2_155 ------------LHRDLPSRFAVVPRRG------GDIKWFEADTTYVLHF
MAV_0560|M.avium_104 -AATTDRRMPYSWNPNYPARVGVMPRDGEDAD----VRWFDVEPCYVFHP
TH_3959|M.thermoresistible__bu RGNSSDRRFPYSWNPRYPARIGVMPRDGSNKD----VRWFDVEPCYVFHP
MAB_3874c|M.abscessus_ATCC_199 QYSGKSPSIPYSWNPKYPARIGVMPREGDDASRHAPVRWFEIDPCYVFHP
*:*..*:.* * : **: . :*:*
Mb0937c|M.bovis_AF2122/97 TNAYEQG----DEIVLDGFYEGDPQPLDT---GG--TKWEKLFRFLALDR
Rv0913c|M.tuberculosis_H37Rv TNAYEQG----DEIVLDGFYEGDPQPLDT---GG--TKWEKLFRFLALDR
MMAR_4614|M.marinum_M TNAYEEG----DEIVLDGFFEGAPHPLET---SASSTKWEKLFRFLALDR
MUL_0155|M.ulcerans_Agy99 TNAYEEG----DEIVLDGFFEGAPHPLET---SASSTKWEKLFRFLALDR
Mvan_4940|M.vanbaalenii_PYR-1 PNAYEDG----DEIVLDGFFQGDPEPTDG-VDNGMSGKWRQIFRSLSLDG
Mflv_1807|M.gilvum_PYR-GCK PNAFEDG----DEIVLDGFFQGDPEPTQG-VDNGMSRKWQQIFRSLSLDG
MSMEG_5609|M.smegmatis_MC2_155 TNAFEDG----DEIVMDGFFQGSPEPDDDPADNGMSRKWQRFFRYLSLDG
MAV_0560|M.avium_104 MNAYEED----GTIVLDVVRNPKMFDRDR----------------TGPNE
TH_3959|M.thermoresistible__bu MNAYDDG----DTIVLDVIRHPKMFDTDN----------------LGPNE
MAB_3874c|M.abscessus_ATCC_199 LNGYSEMRNGAEVIVIDLVRYDSMFSQDV----------------LGPSD
*.:.: **:* . : . .
Mb0937c|M.bovis_AF2122/97 LQSRLHRWRLNMVTGAVHEEQLSESITEFGTINADYAASSYRYTYAATGK
Rv0913c|M.tuberculosis_H37Rv LQSRLHRWRLNMVTGAVHEEQLSESITEFGTINADYAASSYRYTYAATGK
MMAR_4614|M.marinum_M LQTRLHRWRLNLVTGAVKEERLSESITEFGTINSDYAARQYRYAYAATGK
MUL_0155|M.ulcerans_Agy99 LQTRLHRWRLNLVTGAVKEERLSESITEFGTINSDYAARQYRYAYAATGK
Mvan_4940|M.vanbaalenii_PYR-1 MQTRLHRWRFNLVTGEAREEQLSDSITEFGMINPAYSGRPYRYTYAATGK
Mflv_1807|M.gilvum_PYR-GCK MQTRLHRWRFNLKTGAVREEHLSDSFTEFGMINPGFSGRPHRYTYAETGK
MSMEG_5609|M.smegmatis_MC2_155 MQTRLHRWRFNLVTGETREEQLSDSLTEFGMINPDFATQDYRYIYAATGK
MAV_0560|M.avium_104 GPPTLDRWVIDLAAGKVRESRIDDRGQEFPRIDERLVGKRHRYGYTPTVL
TH_3959|M.thermoresistible__bu GPPTLDRWTVDLADGKVRESRIDDRGQEFPRVDERLVGRRHRYGYAPTVG
MAB_3874c|M.abscessus_ATCC_199 AKGQLDRWTIDLAKGTVHMERKDDRHLEFPRINETFTGKKHRYGYLPDVE
*.** .:: * .: .: .: ** :: :** *
Mb0937c|M.bovis_AF2122/97 ----PSWFLFDGLVKHDLLTGNHECYSFGDGVYGSETAMAPRVG------
Rv0913c|M.tuberculosis_H37Rv ----PSWFLFDGLVKHDLLTGNHECYSFGDGVYGSETAMAPRVG------
MMAR_4614|M.marinum_M ----PGWFLFDGLVKHDLLTGNQEGISFGEGVYGSETQMAPRVG------
MUL_0155|M.ulcerans_Agy99 ----PGWFLFDGLVKHDLLTGNQEGISFGEGVYGSETQMAPRVG------
Mvan_4940|M.vanbaalenii_PYR-1 ----PGWFLFDGLVRHDLHTGTEQRYGFGDGVYGSETAMAPRVGSAAADH
Mflv_1807|M.gilvum_PYR-GCK ----PGWFLFDGLVKHDLHTGTEQRFTFDDGVFGSETAMAPRVG------
MSMEG_5609|M.smegmatis_MC2_155 ----PGWFLFDGLVRHDLRTGSEERYTFADGVYGSETAMAPRVG------
MAV_0560|M.avium_104 ----EGIEGGDCLLKHDLIGGSTQSRSLGPQKALGEFVFHPSSP------
TH_3959|M.thermoresistible__bu ----EGTSGGNVLLKHDFVGGNTQSRVFEPYHELGEFVFQPSSA------
MAB_3874c|M.abscessus_ATCC_199 NFFGSGEAAGASIVKYDYETGSTLSSRLDPAIVLGEMSFVPNPT------
. ::::* *. : .* : *
Mb0937c|M.bovis_AF2122/97 -------------------SSAEDDGYLVTLTTDMNDDASYCLVFDAARP
Rv0913c|M.tuberculosis_H37Rv -------------------SSAEDDGYLVTLTTDMNDDASYCLVFDAARP
MMAR_4614|M.marinum_M -------------------SSAEDDGYLVTLTTDMNDDASYCLVFDAARI
MUL_0155|M.ulcerans_Agy99 -------------------SSAEDDGYLVTLTTDMNDDASYCLVFDAARI
Mvan_4940|M.vanbaalenii_PYR-1 IGGSAAAHIGGSAAAHIGGSAAEDDGYLVTLTTDMAADASYCLVFDAARV
Mflv_1807|M.gilvum_PYR-GCK -------------------GTDEDDGYLVTLTTDMNTDASYCLVFDAARV
MSMEG_5609|M.smegmatis_MC2_155 -------------------GSGEDDGYLVTLISDMNDDASYCLVFDAARV
MAV_0560|M.avium_104 -------------------TAAEDEGVLMGYVYDRATNRSELAILDAQTL
TH_3959|M.thermoresistible__bu -------------------DAAEDDGVVMGYVYDRTTDRSELAILDAQTL
MAB_3874c|M.abscessus_ATCC_199 -------------------CAAEDDGVLIGFAVDRRSDEGQLLLLDATSL
: **:* :: * : . ::**
Mb0937c|M.bovis_AF2122/97 GDGPICKLALPERISSGTHSAWVPGAELRRWDHAESPAAAVGL
Rv0913c|M.tuberculosis_H37Rv GDGPICKLALPERISSGTHSAWVPGAELRRWDHAESPAAAVGL
MMAR_4614|M.marinum_M ADGPVCKLELPERISSGTHSTWVPGNELRRWHHADSAPSAIGL
MUL_0155|M.ulcerans_Agy99 ADGPVCKLELPERISSGTHSTWVPGNELRRWHHADSAPSAIGL
Mvan_4940|M.vanbaalenii_PYR-1 GDGPVCKLQLPERISSGTHSTWAPGADLPQWRESDSAAGAIGL
Mflv_1807|M.gilvum_PYR-GCK GDGPVCKLQLPERISSGTHSTWAAGCDLPRWRDSESAAGAIGL
MSMEG_5609|M.smegmatis_MC2_155 GDGPVCKLALPERISSGTHSTWVSGAELRRWHTSDDAAAAIGM
MAV_0560|M.avium_104 ED--VASIKLPHRVPAGFHGNWVPSTN----------------
TH_3959|M.thermoresistible__bu ED--VARIRLPHRVPAGFHGNWVPSDG----------------
MAB_3874c|M.abscessus_ATCC_199 DL--MATVHLPQRVPAGFHGNWAPR------------------
:. : **.*:.:* *. *..