For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MIVDWLYSIGIRSRRMGTDWLDVPVSKATEQRWLVKRARIYRNVVIPQPDNPASPKLLWESNFSSMEEAL RYWGLQTGRWGQSAGENQYYTDGDNVYIDADGNLVIEARREAAPDGLGAPYNYTSARVVTMGKQSIGVGT RVVARIQMPVDKGVLPAFWSVGLEPGHEYDWPRQGEIDIVEIPGLGTPAARRLWTGNIHGPAETDNSVDV KLHGVEADLGVDLSQGFHDYGMDWYSDRIVWHVDGVEVGRITQAQYEALGGNWTAFSGAWDHYLILNVAV GNPWTGDPDPNAPFQAQMKVDWVKAYAL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2739 | - | - | 100% (308) | glycoside hydrolase family protein |
M. vanbaalenii PYR-1 | Mvan_2679 | - | 3e-22 | 34.50% (258) | glycoside hydrolase family protein |
M. vanbaalenii PYR-1 | Mvan_0446 | - | 2e-13 | 27.66% (235) | glycoside hydrolase family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0323 | - | 1e-10 | 28.63% (227) | beta-1,3-glucanase precursor |
M. gilvum PYR-GCK | Mflv_0298 | - | 2e-15 | 26.69% (281) | glycoside hydrolase family protein |
M. tuberculosis H37Rv | Rv0315 | - | 1e-10 | 28.63% (227) | beta-1,3-glucanase precursor |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4740 | - | 9e-12 | 28.26% (230) | beta-1,3-glucanase |
M. marinum M | MMAR_2902 | - | 4e-11 | 26.84% (231) | beta-1,3-glucanase precursor |
M. avium 104 | MAV_2761 | - | 5e-10 | 26.27% (236) | glycosyl hydrolases family protein 16 |
M. smegmatis MC2 155 | MSMEG_0645 | - | 7e-14 | 25.36% (280) | putative beta-1,3-glucanase |
M. thermoresistible (build 8) | TH_0196 | - | 5e-11 | 26.29% (232) | POSSIBLE BETA-1,3-GLUCANASE PRECURSOR |
M. ulcerans Agy99 | MUL_4744 | - | 7e-10 | 26.81% (235) | beta-1,3-glucanase precursor |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2902|M.marinum_M --MPEMDRRRMMLMTGFGVLGAALPVPAASADSSRRDMPLAP-APNGQS- MAV_2761|M.avium_104 --MPEIDRRRMIVTTGIGVLAAALPNPRAGASP----APPPA-APSGQS- MAB_4740|M.abscessus_ATCC_1997 -----MDRRRMMAFSGLGMLAAAASMPQAWAQPSPLGPPNRP-PAAPPT- Mb0323|M.bovis_AF2122/97 MLMPEMDRRRMMMMAGFGALAAALPAPTAWADPSRPAAPAGP-TPAPAAP Rv0315|M.tuberculosis_H37Rv MLMPEMDRRRMMMMAGFGALAAALPAPTAWADPSRPAAPAGP-TPAPAAP MUL_4744|M.ulcerans_Agy99 MLMQEIDRRRIIMMAGFGALAAAIPAPTAGAAP---IPPAAP-EPAPAAP Mflv_0298|M.gilvum_PYR-GCK --MPEMDRRKAMLMMGLGAAVVASPLGSAHAQPPA--VPSEP-LPAGDA- MSMEG_0645|M.smegmatis_MC2_155 ----------MMFMMGLGVAAAALPVGTAGADPLIGDNPPGP-GPAAAA- TH_0196|M.thermoresistible__bu --MPMMNRRQAMMMLGFGAVAAALPLPQAGAQPVLDAPAPGPDTPEAAS- Mvan_2739|M.vanbaalenii_PYR-1 -MIVDWLYSIGIRSRRMGTDWLDVPVSKATEQRWLVKRARIYRNVVIPQP : :* . * . MMAR_2902|M.marinum_M ----G-PYLFHDEFDGPAGSAPDSSKWTVARAREEMKDPTYWERPENVGQ MAV_2761|M.avium_104 ----G-TYLFQDEFDGPAGSAPDASKWAVAKARETIKDPTYWERPENIGQ MAB_4740|M.abscessus_ATCC_1997 ----G-KYVFVDEFDGPAGSAPDGSKWAISKARETMKDPTFWELPENVGQ Mb0323|M.bovis_AF2122/97 AAATG-GLLFHDEFDGPAGSVPDPSKWQVSNHRTPIKNPVGFDRPQFFGQ Rv0315|M.tuberculosis_H37Rv AAATG-GLLFHDEFDGPAGSVPDPSKWQVSNHRTPIKNPVGFDRPQFFGQ MUL_4744|M.ulcerans_Agy99 AAGAGPIFLWHDEFDGPAGSAPDPSKWQVSNHRTPIRNPVGFDRPEFWGQ Mflv_0298|M.gilvum_PYR-GCK ----GPLMLFQDEFDGPAGAPPDPARWFIVPARETIRNPVEWDKPFNMGR MSMEG_0645|M.smegmatis_MC2_155 ----EPTFLFQDEFNGPAGSPPDPAWWYLVPARETIKNPVEWDKPYNMGR TH_0196|M.thermoresistible__bu ----GPGLLFADEFDGPAGSPPDPAKWFIVPERETIRNPVEWDKPYNMGR Mvan_2739|M.vanbaalenii_PYR-1 DNPASPKLLWESNFSSMEEALR---YWGLQTGR--------WGQSAGENQ :: .:*.. : * : * : . .: MMAR_2902|M.marinum_M YRDDRQNVFLDGKSNLVIRAAKDGGT--------YYAGKIQSPWRG--GI MAV_2761|M.avium_104 YRDDRRNVFLDGKSNLVLRAAKDGPT--------YYSGKVQSLWRG--GV MAB_4740|M.abscessus_ATCC_1997 YRDDRKNVFLDGNSNLVIKAAKEGNT--------YYGGKIYSTTEL--GI Mb0323|M.bovis_AF2122/97 YRDSRQNVFLDGNSNLVLRATREGNR--------YFGGLVHGLWRG--GI Rv0315|M.tuberculosis_H37Rv YRDSRQNVFLDGNSNLVLRATREGNR--------YFGGLVHGLWRG--GI MUL_4744|M.ulcerans_Agy99 YRDNRQNVFLDGNSNLVLRATRSGND--------YFGGLVHGLWRG--GI Mflv_0298|M.gilvum_PYR-GCK YVTDQEHVFQDGNGNLVIRATRGEGTT---IQEKYASAKIMGTWRG--GI MSMEG_0645|M.smegmatis_MC2_155 YVTDQEHAFQDGKGNLVIRATRGPGTT---IQEKYASAKVVGLWRG--GI TH_0196|M.thermoresistible__bu YVTDQEHVFHDGNGNLVIRATRGPGAN---IREKYASAKIVGLWRG--GV Mvan_2739|M.vanbaalenii_PYR-1 YYTDGDNVYIDADGNLVIEARREAAPDGLGAPYNYTSARVVTMGKQSIGV * . :.: *...***:.* : * .. : . *: MMAR_2902|M.marinum_M GHTWEARIKFDCLTAGCWPAWWLG------NQD---RGEIDIIEWYGNGS MAV_2761|M.avium_104 GHTWEARIKLDCLTAGAWPAYWLG------NDD---QGEIDVMEWYGNGN MAB_4740|M.abscessus_ATCC_1997 GYTWEARIKFNCLTPGAWPAFWLG------SDQ---DGEIDIVEWYGNGS Mb0323|M.bovis_AF2122/97 GTTWEARIKFNCLAPGMWPAWWLS------NDDPGRSGEIDLIEWYGNGT Rv0315|M.tuberculosis_H37Rv GTTWEARIKFNCLAPGMWPAWWLS------NDDPGRSGEIDLIEWYGNGT MUL_4744|M.ulcerans_Agy99 GTTWEARIKFNCLAPGMWPAWWLS------NDDPGRSGEIDLIEWYGNGS Mflv_0298|M.gilvum_PYR-GCK GTTWEARVKLDCLTDGAWPAFWLV------NENPVRGGEVDLVEWYGNND MSMEG_0645|M.smegmatis_MC2_155 GTTWEARVKLNCLTDGAWPAFWLL------NDNPVRGGEVDLVEWYGNRD TH_0196|M.thermoresistible__bu GTTWEARVKLNCLTDGAWPAFWLL------NDDPVRGAEIDIFEWYGNRD Mvan_2739|M.vanbaalenii_PYR-1 GTRVVARIQMP-VDKGVLPAFWSVGLEPGHEYDWPRQGEIDIVEIPGLGT * **::: : * **:* . : .*:*:.* * MMAR_2902|M.marinum_M ------WP--------SATTVHAKANGSEWKTRNVALDSGWHTWRCQWDE MAV_2761|M.avium_104 ------WP--------SATTVHAKANGGEWKTHNIAVDSAWHTWRCQWDE MAB_4740|M.abscessus_ATCC_1997 ------WP--------SATTVHAKANGSEWKTHNISLDSGWHTWRTQWDD Mb0323|M.bovis_AF2122/97 ------WP--------SGTTVHANPDGTAFETCPIGVDGGWHNWRVTWNP Rv0315|M.tuberculosis_H37Rv ------WP--------SGTTVHANPDGTAFETCPIGVDGGWHNWRVTWNP MUL_4744|M.ulcerans_Agy99 ------WP--------SGTTVHANPDGTAFETFPIGVDDNWYNWRVTWNV Mflv_0298|M.gilvum_PYR-GCK ------WP--------SGTTVHARLDGTAFATNRHPVDNAWHTWRMTWQP MSMEG_0645|M.smegmatis_MC2_155 ------WP--------SGTTVHARLDGTSFATNPHPVDSDWHTWRMSWKP TH_0196|M.thermoresistible__bu ------WP--------SGATVHAKLDGTMFQTQNYPVDSAWHTWRMTWLP Mvan_2739|M.vanbaalenii_PYR-1 PAARRLWTGNIHGPAETDNSVDVKLHGVEADLG-VDLSQGFHDYGMDWYS *. : :*... .* :. :: : * MMAR_2902|M.marinum_M TGMRFWQDYAEG---AQPYFTVAAH-------SLPDWPFNDPGYTVFPVL MAV_2761|M.avium_104 AGIRFWKDYVDG---AQPYFDVPAS-------SLPDWPFNGPGYTVFPVF MAB_4740|M.abscessus_ATCC_1997 KGIRFWKDYTDG---ATPYFEVPAN-------SLADWPFNNPGHKAFAVL Mb0323|M.bovis_AF2122/97 SGMYFWLDYADG---IEPYFSVPATGIEDLNEPIREWPFNDPGYTVFPVL Rv0315|M.tuberculosis_H37Rv SGMYFWLDYADG---IEPYFSVPATGIEDLNEPIREWPFNDPGYKVFPVL MUL_4744|M.ulcerans_Agy99 TGMYFWLDYADG---MQPYFSVPATGIEDLNEPIREWPFNDPDYTVFPVL Mflv_0298|M.gilvum_PYR-GCK TGLYFWKDYQPG---MEPFFTVPAN-------SIPDWPFNDPGFTMVPVF MSMEG_0645|M.smegmatis_MC2_155 EGMYFWKDYAPG---MEPFFSVPAN-------SLQDWPFNDPGYTMVPVF TH_0196|M.thermoresistible__bu SGMYFWQDYEPG---KEPFFTVLAN-------SLPEWPFNDPGYTMVPVF Mvan_2739|M.vanbaalenii_PYR-1 DRIVWHVDGVEVGRITQAQYEALGG----------NWTAFSGAWDHYLIL : : * . : . . :*. . :: MMAR_2902|M.marinum_M NLAVAGSGGGDPRPGS-YPAQMLVDWVRVW-- MAV_2761|M.avium_104 NLAVAGSGGGDPGPGS-YPADMLIDWIRVW-- MAB_4740|M.abscessus_ATCC_1997 NLAVAGSGGGDPRGGT-YPAEMLVDWIRVW-- Mb0323|M.bovis_AF2122/97 NLAVGGSGGGDPATGS-YPQEMLVDWVRVF-- Rv0315|M.tuberculosis_H37Rv NLAVGGSGGGDPATGS-YPQEMLVDWVRVF-- MUL_4744|M.ulcerans_Agy99 NLAVGGSGGGDPAAGT-YPQEMLVDWVRVF-- Mflv_0298|M.gilvum_PYR-GCK NIAVGGSGGREPAAGT-YPAEMRVDWIRVFAS MSMEG_0645|M.smegmatis_MC2_155 NIAVGGSGGREPAGGT-YPAEMLVDWIRVFAG TH_0196|M.thermoresistible__bu NIAVGGSGGREPAGGS-YPADMIIDWIRVF-- Mvan_2739|M.vanbaalenii_PYR-1 NVAVGNPWTGDPDPNAPFQAQMKVDWVKAYAL *:**... :* .: : :* :**::.: