For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ARTEEELRPRRRMLRRPGIGLRLLAAQAIVLVAGAVTTSVVAAIVGPPLFHDHLHQAGISAGSPEEMHAE EAYTYATVISIGGALAVSALAALAVSWYISRRLQRSVTEVAEAASSVAEGHYDVRVSSPQLGDDFDALAD AFNQMASRLQTVESTRQRLFSDLAHEIRTPVAVLEAYIEALEDGVRTLTPQTAAMLRDQTRRLVRFSDDV AALAKAEESSASMACSFVDVPRLAHHCAAAAQERFDSKNVTLAVRVAEGLPPLWADEQRLAQVVGNLVDN ALRHTPAGGRVEVSWEREGAELALRVADNGAGIAAEHLPRLFERFYRADTARDREHGGAGIGLAITRALV EAHGGTISVASAGPGTGATFTVTLPLAPARDELVALGVARPAAQ*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_1833 | - | - | 100% (395) | integral membrane sensor signal transduction histidine kinase |
M. vanbaalenii PYR-1 | Mvan_3675 | - | e-125 | 60.43% (374) | integral membrane sensor signal transduction histidine kinase |
M. vanbaalenii PYR-1 | Mvan_5174 | - | 8e-40 | 31.86% (317) | integral membrane sensor signal transduction histidine kinase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0781 | phoR | 2e-39 | 31.52% (330) | two component system response sensor kinase membrane |
M. gilvum PYR-GCK | Mflv_2837 | - | 1e-163 | 77.75% (373) | integral membrane sensor signal transduction histidine kinase |
M. tuberculosis H37Rv | Rv0758 | phoR | 8e-39 | 33.12% (320) | two component system response sensor kinase membrane |
M. leprae Br4923 | MLBr_02440 | - | 3e-28 | 32.31% (229) | putative two-component system sensor histidine kinase |
M. abscessus ATCC 19977 | MAB_3340 | - | 1e-106 | 55.83% (360) | sensor histidine kinase |
M. marinum M | MMAR_4941 | phoR | 6e-40 | 34.29% (312) | two-component system response phosphate sensor kinase, PhoR |
M. avium 104 | MAV_0703 | - | 4e-42 | 33.44% (311) | sensor histidine kinase PhoR |
M. smegmatis MC2 155 | MSMEG_5870 | - | 1e-39 | 33.12% (314) | sensor histidine kinase PhoR |
M. thermoresistible (build 8) | TH_2452 | - | 1e-31 | 29.69% (320) | PUTATIVE putative sensor histidine kinase PhoR |
M. ulcerans Agy99 | MUL_0464 | phoR | 4e-40 | 34.29% (312) | two component system response phosphate sensor kinase, PhoR |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_1833|M.vanbaalenii_PYR-1 -------------------------------------MARTEEELRPRRR Mflv_2837|M.gilvum_PYR-GCK -------------------------------------MTPPPASTARRRR MAB_3340|M.abscessus_ATCC_1997 -------------------------------------MTRP--------- MMAR_4941|M.marinum_M -----------MAERLPRAVPLRVGLVAATLALVLCGLLASGVAVTSILR MUL_0464|M.ulcerans_Agy99 -----------MAERLPRAVQLRVGLVAATLALVLCGLLASGVAVTSILR MAV_0703|M.avium_104 ----------MVVTRPRRGLPLRVGLVAATLALVACGLAVSGIAVTSILR MSMEG_5870|M.smegmatis_MC2_155 ------------MNRGRRGIPLRVGLVAAALVLVACGLLASGIAVTSIMR Mb0781|M.bovis_AF2122/97 -----------MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQ Rv0758|M.tuberculosis_H37Rv -----------MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQ TH_2452|M.thermoresistible__bu MTSEPPSPSGRPRWRRLLPSAARTRIIGWVLLLVMVALGVVTLTTWRLMV MLBr_02440|M.leprae_Br4923 ---------------------------MFSALLLAGVLSGLAFVVGIVAG : Mvan_1833|M.vanbaalenii_PYR-1 MLRRPGIGLRLLAAQAIVLVAGAV-----------------TTSVVAAIV Mflv_2837|M.gilvum_PYR-GCK RRGRPGIGLRLLAAQAIVLAAGAV-----------------TTAVVAAVV MAB_3340|M.abscessus_ATCC_1997 ---RYGIGLRLLVVNSLVVLAGIA-----------------TTSVVAAIV MMAR_4941|M.marinum_M HSLVSRIDSTLLEASRTWAQASWR-----------------HSMPSVEGP MUL_0464|M.ulcerans_Agy99 HSLVSRIDSTLLEASRTWAQASWR-----------------HSMPSVEGP MAV_0703|M.avium_104 HSLVSRIDSTLLDASRGWAQAPRR-----------------QSSSAYEGP MSMEG_5870|M.smegmatis_MC2_155 HTEVSRIDQTLLDASRSWAQAPRR-----------------APTTPLEGP Mb0781|M.bovis_AF2122/97 HRLTSRIDRVLLEEAQIWAQITLP-----------------LAPDPYPIH Rv0758|M.tuberculosis_H37Rv HRLTSRIDRVLLEEAQIWAQITLP-----------------LAPDPYPGH TH_2452|M.thermoresistible__bu SSIDARMDEALHIEVDEFEELTASGLNPRTGAPFTGVAEVIREAIAYNLA MLBr_02440|M.leprae_Br4923 IRLSPRLIERRQRLANEWAGITVL-----------------QMLQRIIAL : Mvan_1833|M.vanbaalenii_PYR-1 GPP----------LFHDHLHQAGISAGSPEEMHAEEAYT--------YAT Mflv_2837|M.gilvum_PYR-GCK GPP----------LFREHLHRAGVPMNSPEEVHAEEAYG--------YAT MAB_3340|M.abscessus_ATCC_1997 GPP----------MFRRLMDQQ-VSPGAGNDHPYERAFR--------DAT MMAR_4941|M.marinum_M DPAR-----PPSKFYVRSISPDGRAMTAINDRNAEPALPADNDVGSDPTT MUL_0464|M.ulcerans_Agy99 DPAR-----PPSKFYVRSISPDGRAMTAINDRNAEPALPADNDVGSDPTT MAV_0703|M.avium_104 DPGR-----PPSKFYVRGVSTDGTPFTAINDRNAEPALPADNDVGPNPTT MSMEG_5870|M.smegmatis_MC2_155 NPAR-----PPSNFYVRGFDEDGRTWIAVNDREAEPALPENNDVGPVPVT Mb0781|M.bovis_AF2122/97 NPDR-----PPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTT Rv0758|M.tuberculosis_H37Rv NPDR-----PPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTT TH_2452|M.thermoresistible__bu RPNEKFLGYVDGEYHTQSRQEPGFPEVLAGDDAFTERVATVTEPVEGSYD MLBr_02440|M.leprae_Br4923 MPLG------------AAVVDTYRDVVYLNEQAKELGLVR---------- * : Mvan_1833|M.vanbaalenii_PYR-1 VISIGG----------------------------------------ALAV Mflv_2837|M.gilvum_PYR-GCK VMSIGG----------------------------------------ALAV MAB_3340|M.abscessus_ATCC_1997 AMSIGF----------------------------------------AVAV MMAR_4941|M.marinum_M LPSVNGSNIEWRAVSVHGPQGGLTTVAIDLSDVQ-HTVRSLVWLQIGIGA MUL_0464|M.ulcerans_Agy99 LPSVNGSNIEWRAVSVHGPQGGLTTVAIDLSDVQ-HTVRSLVWLQIGIGA MAV_0703|M.avium_104 LPSVNGSDIQWRAVSVRGPHG-LTTVAIDLSDVQ-HTVSSLVWLQIGIGV MSMEG_5870|M.smegmatis_MC2_155 VGSIDKSNVEWRAMTVRGPNGELTTVAIDLSEVQ-SSVRALVWSQVGIGA Mb0781|M.bovis_AF2122/97 LPSIGGSKTLWRAVSVRASDGYLTTVAIDLADVR-STVRSLVLLQVGIGS Rv0758|M.tuberculosis_H37Rv LPSIGGSKTLWRAVSVRASDGYLTTVAIDLADVR-STVRSLVLLQVGIGS TH_2452|M.thermoresistible__bu HPEVGEVRYLAIPVTMAGDPAQGVIVAAYLGDAERAAADDAARLMLLVGA MLBr_02440|M.leprae_Br4923 ------------------------------------------------DR Mvan_1833|M.vanbaalenii_PYR-1 SALAALAVS-WYISRRLQRSVTEVAEAASSVAEGHYDVRVSSPQLGDDFD Mflv_2837|M.gilvum_PYR-GCK SALAALAVS-FYVSRRLQRSVTEVASAATDVAQGNYDVRVSSPRLGDDFD MAB_3340|M.abscessus_ATCC_1997 SALAALTLS-WYLSHRVHRSATALSQAASAVADGNYDIRVPPPRLGKEFD MMAR_4941|M.marinum_M GVLVVVGLAGFAVVQRSLRPLSEVEQTAAAIASGQLDRRVPERDPRTEVG MUL_0464|M.ulcerans_Agy99 GVLVVVGLAGFAVVQRSLRPLSEVEQTAAAIASGQLDRRVPERDPRTEVG MAV_0703|M.avium_104 AVLAVVGIASFAVVQRSLRPLVEVEQTAAAIAAGQLDRRVPERDPRTEVG MSMEG_5870|M.smegmatis_MC2_155 AVLLVLGVVGYVVVHRSLRPLVEVERTAAAIAAGQLDRRVPERDPRTEVG Mb0781|M.bovis_AF2122/97 AVLVVLGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVG Rv0758|M.tuberculosis_H37Rv AVLVVPGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVG TH_2452|M.thermoresistible__bu ATLFGAIGAAWLVAGRILRPLRDVADTARTITDTDLSRRIPSRGEGDEMD MLBr_02440|M.leprae_Br4923 QLDDQAWRAAQQALGGDDVEFDLLPGKRPAAGRSGLSVHGHARLLSEKDR . . : . Mvan_1833|M.vanbaalenii_PYR-1 ALADAFNQMASRLQTVESTR--------------QRLFSDLAHEIRTPVA Mflv_2837|M.gilvum_PYR-GCK ALCTAFNQMASRLQTVDSTR--------------QQLFGDLAHEIRTPVA MAB_3340|M.abscessus_ATCC_1997 AVAAAFNKMAQRLGAVDEAR--------------RQMLADLAHEIRTPVA MMAR_4941|M.marinum_M QLSLAMNGMLSQIQVALAASEDSAEKARSSEERMRRFITDASHELRTPLT MUL_0464|M.ulcerans_Agy99 QLSLAMNGMLSQIQVALAASEDSAEKARSSEERMRRFITDASHELRTPLT MAV_0703|M.avium_104 RLSLALNGMLAQIQQALASSESSAEKARGSEDRMRRFITDASHELRTPLT MSMEG_5870|M.smegmatis_MC2_155 RLSSALNGMLAQIQRAVAASEASAEQARSSEDRMRRFITDASHELRTPLT Mb0781|M.bovis_AF2122/97 RLSLALNGMLAQIQRAVASAESSAEKARDSEDRMRQFITDASHELRTPLT Rv0758|M.tuberculosis_H37Rv RLSLALNGMLAQIQRAVASAESSAEKARDSEDRMRQFITDASHELRTPLT TH_2452|M.thermoresistible__bu SLVRTINGMLDRIEAGVSAQ--------------RRFIDDAGHELRTPIT MLBr_02440|M.leprae_Br4923 RFAVVFVHDQSDYVRMEAAR--------------RDFVANVSHELKTPVG . .: : : :. : .**::**: Mvan_1833|M.vanbaalenii_PYR-1 VLEAYIEALED--GVRTLTPQTAAMLRDQTRRLVRFSDDVAALAKAEESS Mflv_2837|M.gilvum_PYR-GCK VLEAYIEALED--GVRTLTPQTATMLRDQTRRLVRFSNDVAALAKAEESS MAB_3340|M.abscessus_ATCC_1997 VLEAYMEAVED--GVQQLDQQTVATLRDQTRRLTRFSIDVNALSVAESRT MMAR_4941|M.marinum_M TIRGFAELYRQ--GAARDVAMLLSRIESEASRMGLLVDDLLTLARLDVQR MUL_0464|M.ulcerans_Agy99 TIRGFAELYRQ--GAARDVAMLLSRIESEASRMGLLVDDLLTLARLDVQR MAV_0703|M.avium_104 TIRGFAELYRQ--GAARDVAMLLSRIESEASRMGLLVDDLLLLARLDVQR MSMEG_5870|M.smegmatis_MC2_155 TIRGFAELYRQ--GAARDIEMLMGRIESESRRMGLLVEDLLLLARLDAQR Mb0781|M.bovis_AF2122/97 TIRGFAELYRQ--GAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHR Rv0758|M.tuberculosis_H37Rv TIRGFAELYRQ--GAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHR TH_2452|M.thermoresistible__bu IVRGHLEVLDP--DDPDDVRSTVALVDDELVRMNRMVTDLLLLARSE-QP MLBr_02440|M.leprae_Br4923 AMALLAEALLASADDAETVSRFAEKVLIEANRLGYMVAELIELSRLQGAE : * . : : *: : :: *: : Mvan_1833|M.vanbaalenii_PYR-1 ASMACSFVDVPRLAHHCAAAAQERFDSKNVTLAVRVAEGLPPLWADEQRL Mflv_2837|M.gilvum_PYR-GCK VSMSYANIDVDRLTHRCVAAAQERYDNKGVALRVRLQKALPPLWADEQRL MAB_3340|M.abscessus_ATCC_1997 TSIDARSVSPADLVTTAVAAFAPRYQTKGVILTSHADDGLPDVWADPERM MMAR_4941|M.marinum_M P-LERNRVDLLVLAADAVHDARAIDRKRAITVEVLEGPGTPEVLGDEPRL MUL_0464|M.ulcerans_Agy99 P-LERNRVDLLVLAADAVHDARAIDRKRAITVEVLEGPGTPEVLGDEPRL MAV_0703|M.avium_104 P-LEHHRVDLLALASDAVHDAQAMDPKRTITLEVLDGPGTPEVFGDEPRI MSMEG_5870|M.smegmatis_MC2_155 P-LERRRVDLLALATDAVHDAQSIAPKRRVKMEVFDGPGTPEVLGDEARL Mb0781|M.bovis_AF2122/97 P-LELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRL Rv0758|M.tuberculosis_H37Rv P-LELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRL TH_2452|M.thermoresistible__bu TFLTPEPTDIGALTRAIFDKVVQLGDRD----YQLQSVAEVTAVLDAQRI MLBr_02440|M.leprae_Br4923 RLPNVTDIDVDIIVSEAIARHKVAADTAAIEVRTDP-PSGLRVLGDQTLL . :. . * : Mvan_1833|M.vanbaalenii_PYR-1 AQVVGNLVDNALRHTPAGGRVEVSWEREGAELALRVADNGAGIAAEHLPR Mflv_2837|M.gilvum_PYR-GCK SQVLGNLLENALRHTPSGGSVEVNCVRDGDRLRIAVADTGEGIAAEHVNR MAB_3340|M.abscessus_ATCC_1997 GQVLSNLLDNALRHTGPGGQVTVTATATGTGATIAVADTGDGVPAEHLDR MMAR_4941|M.marinum_M RQVLSNLVGNALQHTPDSADVTVRVGTAGQNAVLEVADKGPGMPAEDAAR MUL_0464|M.ulcerans_Agy99 RQVLSNLVGNALQHTPDSADVTVRVGTAGENAVLEVADKGPGMPAEDAAR MAV_0703|M.avium_104 RQVLGNLIANALQHTPESADVTVRVGTDGDDAVLEVADRGPGMNEQDASR MSMEG_5870|M.smegmatis_MC2_155 RQVIGNLVANAVQHTPETAGITVRVGTDGDNAVLEVCDEGPGMSQEDARR Mb0781|M.bovis_AF2122/97 RQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALR Rv0758|M.tuberculosis_H37Rv RQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALR TH_2452|M.thermoresistible__bu TQALIALADNACRYTRDGDWIAVGSGLYDGWLRFWVSDSGPGVSDADRDR MLBr_02440|M.leprae_Br4923 VTALANLVSNAIAYSPGGSLVSISRRRRGDNIEIAVTDRGIGIALEDQER .: * ** :: : : . : * * * *: . * Mvan_1833|M.vanbaalenii_PYR-1 LFERFYRADTARDREHGGAGIGLAITRALVEAHGGTISVASAGPGTGATF Mflv_2837|M.gilvum_PYR-GCK VFERFYRADSARDREHGGAGLGLAIAKALVEAHGGAISVASAGPGGGATF MAB_3340|M.abscessus_ATCC_1997 LFDRFYRADAARDRQHGGAGIGLSIAKALVEAHEGRIEAHSAGHAAGTTF MMAR_4941|M.marinum_M VFERFYRTDSSRARASGGTGLGLSIVHSLVKAHGGDVTLTTAP-GEGCCF MUL_0464|M.ulcerans_Agy99 VFERFYRTDSSRARASGGTGLGLSIVHSLVKAHGGDVTLTTAP-GEGCCF MAV_0703|M.avium_104 VFERFYRTDSSRARASGGTGLGLSIVESLVRAHGGTVGVTTAP-GQGCCF MSMEG_5870|M.smegmatis_MC2_155 VFERFYRADTSRTRASGGTGLGLSIVDSLVYAHGGTVKVTTAL-GKGSRF Mb0781|M.bovis_AF2122/97 VFERFYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTAL-GEGCCF Rv0758|M.tuberculosis_H37Rv VFERFYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTAL-GEGCCF TH_2452|M.thermoresistible__bu IFERFARGSAGGQRSDG-AGLGLSIVRAIAGAHGGHVDLDTVV-GRGSTF MLBr_02440|M.leprae_Br4923 VFERFFRGDKARSRATGGSGLGLAIVKHVAANHNGSIGVWSKP-GTGSTF :*:** * . . * * :*:**:*. :. * * : : . * * Mvan_1833|M.vanbaalenii_PYR-1 TVTLPLAPARDELVALGVARPAAQ-------------------------- Mflv_2837|M.gilvum_PYR-GCK TLAMPITPERTEQTPVTADSARI--------------------------- MAB_3340|M.abscessus_ATCC_1997 TVSLPRPSDHPEKAPG--QRPG---------------------------- MMAR_4941|M.marinum_M RVTLPRVSEAAVELTEPVS------------------------------- MUL_0464|M.ulcerans_Agy99 RVTLPRVSEAAVELTEPVS------------------------------- MAV_0703|M.avium_104 RVTLPRISDVPAVQAS---------------------------------- MSMEG_5870|M.smegmatis_MC2_155 TVSLPRIADLPARL------------------------------------ Mb0781|M.bovis_AF2122/97 RVSLPRVSDVDQLSLTPVVPGPP--------------------------- Rv0758|M.tuberculosis_H37Rv RVSLPRVSDVDQLSLTPVVPGPP--------------------------- TH_2452|M.thermoresistible__bu TITIPAVLEAPWPAS----------------------------------- MLBr_02440|M.leprae_Br4923 TLSIPAAMPLYQDNDEQSGQPRGCDMWLNRPQREEEEFKSMTPAQAMMQS :::* Mvan_1833|M.vanbaalenii_PYR-1 --------------------- Mflv_2837|M.gilvum_PYR-GCK --------------------- MAB_3340|M.abscessus_ATCC_1997 --------------------- MMAR_4941|M.marinum_M --------------------- MUL_0464|M.ulcerans_Agy99 --------------------- MAV_0703|M.avium_104 --------------------- MSMEG_5870|M.smegmatis_MC2_155 --------------------- Mb0781|M.bovis_AF2122/97 --------------------- Rv0758|M.tuberculosis_H37Rv --------------------- TH_2452|M.thermoresistible__bu --------------------- MLBr_02440|M.leprae_Br4923 EVTRGNVNDKCPDCGGRGIAG